Abstract

Deep mitochondrial divergence within species may result from cryptic speciation, from phylogeographic isolation or from endosymbiotic bacteria like Wolbachia that manipulate host reproduction. Phengaris butterflies are social parasites that spend most of their life in close relationship with ants. Previously, cryptic speciation has been hypothesised for two Phengaris species based on divergent mtDNA sequences. Since Phengaris species are highly endangered, the existence of cryptic species would have drastic consequences for conservation and management. We tested for cryptic speciation and alternative scenarios in P. teleius and P. nausithous based on a comprehensive sample across their Palaearctic ranges using COI gene sequences, nuclear microsatellites and tests for Wolbachia. In both species a deep mitochondrial split occurring 0.65–1.97 myrs ago was observed that did not correspond with microsatellite data but was concordant with Wolbachia infection. Haplotypes previously attributed to cryptic species were part of the Wolbachia-infected clades. In both species remaining phylogeographic structure was largely consistent between mitochondrial and nuclear genomes. In P. teleius several mitochondrial and nuclear groups were observed in East Asia while a single haplogroup and nuclear cluster prevailed across continental Eurasia. Neutrality tests suggested rapid demographic expansion into that area. In contrast, P. nausithous had several mitochondrial and nuclear groups in Europe, suggesting a complex phylogeographic history in the western part of the species range. We conclude that deep intraspecific divergences found in DNA barcode studies do not necessarily need to represent cryptic speciation but instead can be due to both infection by Wolbachia and phylogeographic structure.

Highlights

  • Cryptic species, i.e. the presence of phylogenetically distinct units within a morphologically defined taxon [1], are a common phenomenon among all animal taxa and biogeographical regions

  • Wolbachia Infection In P. teleius we found 19 out of 147 (13%) individuals investigated to be infected with Wolbachia, while in P. nausithous we found 6 out of 112 (5.4%) (Table S1)

  • Phylogenetic Inference and Wolbachia Infection Our phylogenetic analysis based on mtDNA c Oxidase I (COI) sequences revealed that P. teleius and P. nausithous were clearly separated and formed well supported monophyletic clades

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Summary

Introduction

I.e. the presence of phylogenetically distinct units within a morphologically defined taxon [1], are a common phenomenon among all animal taxa and biogeographical regions. They can seriously confuse taxonomy based solely on morphological characters [2]. Cryptic speciation affects our understanding of biodiversity and its conservation [1]. DNA barcoding using the mitochondrial gene Cytochrome c Oxidase I (COI) has become a standard method to assign unknown individuals to species, to assess biodiversity, and to discover new species including cryptic units within well-defined morphospecies [4,5]. For some of the cryptic units it has been shown that they correspond well with a divergent ecological niche [6]

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