Root Rot and Wilt caused by Fusarium nygamai of Bean (Phaseolus vulgaris) in Sinaloa, Mexico.

Abstract

Bean (Phaseolus vulgaris) is the second most important crop in Mexico after corn due to high consumption in all regions of the country. Sinaloa state is ranked second in Mexico, producing 140,830 tons in 2020 (SIAP, 2021). In October 2020, wilting symptoms (stunted growth, withered leaves, root rot and wilt) were observed on commercial bean crops in three fields in Culiacan, Sinaloa with an incidence of 3 to 5%. Tissue samples from symptomatic roots were plated on potato dextrose agar (PDA). Typical Fusarium spp. colonies were obtained from all root samples. Three pure cultures were obtained by single-spore culturing. On PDA, the colonies produced abundant white aerial mycelium, and the center of old cultures was light pink with yellow pigmentation (Leslie and Summerell 2006). Macroconidia, from 10-day-old cultures grown on carnation leaf agar, were slightly curved, with three septa, wide central cells, slightly sharp apices, basal foot-shaped cells, measuring 38.5  2.5 × 5.5  1.0 μm (n = 40). Microconidia were hyaline, ovoid, unicellular and measured 12.0  1.5 x 4.8  0.95 μm (n= 40). Chlamydospores were not observed. The translation elongation factor 1 alpha (EF1-α) gene (O'Donnell et al. 1998) was amplified by polymerase chain reaction and sequenced from isolate FNTL6P7CULSIN (GenBank accession no. OK491917). Maximum likelihood analysis was carried out using the EF1-α sequence (OK491917) and other species from the genus Fusarium. Phylogenetic analysis revealed the isolate was F. nygamai (100% bootstrap). Moreover, isolate FNTL6P7CULSIN was 99.7% (648 bp/649bp), and 99.9 % (648bp/650bp) similar, respectively, with other reported F. nygamai sequences (GenBank accession no. OL415419 and KR612341). Pathogenicity tests were performed on 20-day-old bean plants (cultivar Mayocoba) grown on autoclaved sandy loam soil mix. Twenty plants were inoculated by drenching with 20 ml of a conidial suspension (1 × 105 CFU/ml) in an isotonic saline solution of FNTL6P7CULSIN grown on PDA. Ten uninoculated plants served as controls. Plants were maintained for 60 days under greenhouse conditions (25 to 30°C). The assay was conducted twice. Root and stem rot similar to that observed on the infected plants in the field was observed. No symptoms were observed on uninoculated control plants after 60 days. The pathogen was reisolated from necrotic tissue from all inoculated plants and identified as F. nygamai by sequencing the partial EF1-α gene and based on its morphological characteristics, thus fulfilling Koch's postulates. Fusarium nygamai was associated with Fusarium foot rot of rice in Sardinia by Balmas et al., (2000). Also, this pathogen was reported by Leyva (2015) causing root rot in Maize in Sinaloa, Mexico. To our knowledge, this is the first report of root rot and wilt of bean caused by F. nygamai in Mexico. Bean is an important crop in Mexico, and the occurrence of this disease could threaten bean production.