Abstract
Endophytic bacteria are an important part of different functions in plants that lead to plants’ production characteristics as well as their stress response mechanisms. Endophytic bacterial diversity was analyzed in this study to describe 16S rRNA variability and changes in the leaves of drought-tolerant and drought-susceptible wheat when growth under in vitro conditions. A metagenomic analysis was applied and a pilot exploratory study was performed to prove this type of analysis as applicable to tracking endophytic bacterial diversity changes when a drought stress is applied to an in vitro culture of wheat. The study showed that the changes in the bacterial endophytes’ variabilities associated preferentially with the drought stress varietal characteristics of the analyzed wheat instead of the applied stress conditions.
Highlights
Plant-associated microorganisms are referred as the plant microbiome
A metagenomic analysis was applied and a pilot exploratory study was performed to prove this type of analysis as applicable to tracking endophytic bacterial diversity changes when a drought stress is applied to an in vitro culture of wheat
A metagenomic approach was applied and a pilot exploratory study was performed to prove this type of analysis as applicable to tracking endophytic bacterial diversity changes when drought stress is applied to an in vitro culture of wheat
Summary
Plant-associated microorganisms are referred as the plant microbiome. The plant microbial community has a broad-spectrum of species representation. Species of Archea, yeast, Protista or other non-classified unicellular organisms may occasionally appear in such communities, too [5]. According to [6], each bacterial organism fluctuates between the internal space and plant surface during its colonization. It should be noted that most competitive endophytes can migrate between different types of plant tissues or different locations on the same type of tissue in the internal environment of the plant [7]. The specific diversity and species spectrum of endophytes are related to various factors that can be classified into four groups: geography and climate, soil, multitrophic interactions and natural and anthropogenic disorders
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