Forster Resonance Energy Transfer (FRET) from an electronically excited donor to an acceptor molecule is used to quantify the extent of interactions between molecules. For example, FRET can be utilized to determine how proteins form complexes by tagging them differentially with donor and acceptor fluorophores. Recent advances in the FRET theory combined with a novel spectrally resolved two-photon microscope have strengthened the effectiveness of the FRET technique and have enabled us to determine the size and structure of protein oligomers in living cells (Raicu et al., Nature Photonics, 3, 2009). In an ongoing research project in our lab, we are are probing the movement of protomers in an oligomer by appropriately tagging and systematically altering a fluorophore position within each protomer. In the work described here, we show the application of this method in yeast cells (S. cerevisiae) that express the sterile 2 alpha factor protein (Ste2p, a G protein-coupled receptor) tagged with two different variants of the green fluorescent protein (GFP). Previously, we showed by tagging GFP2/YPF (donor/acceptor fluorophores) variants at the C-terminus of Ste2p that Ste2p is self-assembled into a rhombus shaped tetramer. The measured FRET efficiencies of the Ste2p oligomers, which were tagged with fluorophores at various locations in the Ste2p amino acid sequence, were calibrated against FRET reference standards in order to extract information regarding the relative orientations of the fluorescent tags. The effect of an agonist, the yeast mating pheromone alpha factor, on the measured FRET efficiencies was quantified and compared for the various fluorescent tag locations to reveal information regarding the relative movement of the Ste2p protomer segments upon binding of the agonist.
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