Crop Wild Relatives Research Articles

Genomics empowering conservation action and improvement of celery in the face of climate change.

Integration of genomic approaches like whole genome sequencing, functional genomics, evolutionary genomics, and CRISPR/Cas9-based genome editing has accelerated the improvement of crop plants including leafy vegetables like celery in the face of climate change. The anthropogenic climate change is a real peril to the existence of life forms on our planet, including human and plant life. Climate change is predicted to be a significant threat to biodiversity and food security in the coming decades and is rapidly transforming global farming systems. To avoid the ghastly future in the face of climate change, the elucidation of shifts in the geographical range of plant species, species adaptation, and evolution is necessary for plant scientists to develop climate-resilient strategies. In the post-genomics era, the increasing availability of genomic resources and integration of multifaceted genomics elements is empowering biodiversity conservation action, restoration efforts, and identification of genomic regions adaptive to climate change. Genomics has accelerated the true characterization of crop wild relatives, genomic variations, and the development of climate-resilient varieties to ensure food security for 10 billion people by 2050. In this review, we have summarized the applications of multifaceted genomic tools, like conservation genomics, whole genome sequencing, functional genomics, genome editing, pangenomics, in the conservation and adaptation of plant species with a focus on celery, an aromatic and medicinal Apiaceae vegetable. We focus on how conservation scientists can utilize genomics and genomic data in conservation and improvement.

Replenishment of the VIR perennial forage crops collection with samples from a collecting mission in Tambov and Ryazan provinces in 2018

The purpose of the collecting mission was to replenish the collection of perennial forage crops with crop wild relatives (CWR) of interest for breeding purposes, as well as for the subsequent preservation of forage CWR diversity in natural populations. The mission was tasked to conduct a survey of the territory along the middle and lower Tsna river and collect seeds of wild perennial and annual forages. Coordinates of collecting sites were recorded and sites mapped together with the collecting mission route. Two districts of the Tambov and two districts of Ryazan provinces were explored. As a result, 93 seed samples were collected. Out of these, 47 samples were perennial forage grasses, 39 perennial and annual forage legumes, and 7 belonged to other families. The main part of legumes was represented by Medicago species (11 samples of Medicago falcata L., M. varia Mart., M. lupulina L.) and clover (11 samples of Trifolium hybridum L., T. incarnatum L., T. medium L., T. pratensis L., T. repens L.); among the grasses there were Bromopsis inermis (Leyss.) Holub, Poa angustifolia L., Dactylis glomerata L., and Phleum pratense L.

Genetic structure and ecological niche space of lentil's closest wild relative, Lens orientalis (Boiss.) Schmalh.

Crops arose from wild ancestors and to understand their domestication it is essential to compare the cultivated species with their crop wild relatives. These represent an important source of further crop improvement, in particular in relation to climate change. Although there are about 58,000 Lens accessions held in genebanks, only 1% are wild. We examined the geographic distribution and genetic diversity of the lentil's immediate progenitor L. orientalis. We used Genotyping by Sequencing (GBS) to identify and characterize differentiation among accessions held at germplasm collections. We then determined whether genetically distinct clusters of accessions had been collected from climatically distinct locations. Of the 195 genotyped accessions, 124 were genuine L. orientalis with four identified genetic groups. Although an environmental distance matrix was significantly correlated with geographic distance in a Mantel test, the four identified genetic clusters were not found to occupy significantly different environmental space. Maxent modelling gave a distinct predicted distribution pattern centred in the Fertile Crescent, with intermediate probabilities of occurrence in parts of Turkey, Greece, Cyprus, Morocco, and the south of the Iberian Peninsula with NW Africa. Future projections did not show any dramatic alterations in the distribution according to the climate change scenarios tested. We have found considerable diversity in L. orientalis, some of which track climatic variability. The results of the study showed the genetic diversity of wild lentil and indicate the importance of ongoing collections and in situ conservation for our future capacity to harness the genetic variation of the lentil progenitor.

Leaf trichome diversity, acylsugar concentration, and their relationships to leaf area in Solanum galapagense

Glandular trichomes are physical and chemical barriers used by some tomato wild relatives to confer resistance against insect pests and diseases transmitted by them. Solanum galapagense has been identified as one of the potential sources of insect pest resistance. The present study aimed to examine the trichome diversity and acylsugar concentration of 26 accessions of S. galapagense along with one cultivated tomato (S. lycopersicum) and one cherry tomato (S. l. cerasiforme) cultivar. The results revealed large phenotypic variation among S. galapagense accessions for all studied traits. The S. galapagense accessions had significantly higher trichome types IV density on the adaxial and abaxial surfaces of the leaf and greater acylsugar concentration but a smaller leaflet area than the cultivated tomato. The selected cherry tomato line represents greater trichome type IV density and acylsugar concentration than other groups. The acylsugar concentration was positively associated with trichome type IV but negatively associated with trichome type V on both leaf surfaces. DNA markers revealed the presence of two previously identified whitefly-resistance alleles in S. galapagense accessions. This study will support breeding programs aiming to improve insect pest resistance in tomato cultivars using crop wild relatives.

Current status of global conservation and characterisation of wild and cultivated Brassicaceae genetic resources.

The economic importance of the globally distributed Brassicaceae family resides in the large diversity of crops within the family and the substantial variety of agronomic and functional traits they possess. We reviewed the current classifications of crop wild relatives (CWRs) in the Brassicaceae family with the aim of identifying new potential cross-compatible species from a total of 1,242 species using phylogenetic approaches. In general, cross-compatibility data between wild species and crops, as well as phenotype and genotype characterisation data, were available for major crops but very limited for minor crops, restricting the identification of new potential CWRs. Around 70% of wild Brassicaceae did not have genetic sequence data available in public repositories, and only 40% had chromosome counts published. Using phylogenetic distances, we propose 103 new potential CWRs for this family, which we recommend as priorities for cross-compatibility tests with crops and for phenotypic characterisation, including 71 newly identified CWRs for 10 minor crops. From the total species used in this study, more than half had no records of being in ex situ conservation, and 80% were not assessed for their conservation status or were data deficient (IUCN Red List Assessments). Great efforts are needed on ex situ conservation to have accessible material for characterising and evaluating the species for future breeding programmes. We identified the Mediterranean region as one key conservation area for wild Brassicaceae species, with great numbers of endemic and threatened species. Conservation assessments are urgently needed to evaluate most of these wild Brassicaceae.

High-throughput phenotyping reveals multiple drought responses of wild and cultivated Phaseolinae beans.

Although drought resistance of a plant may be achieved through morphological, structural, physiological, cellular, and molecular adaptations, most studies remain limited to quantifying the effect of drought on biomass. Using a highthroughput phenotypic imaging system, we evaluated the drought resistance of 151 bean accessions (Phaseolinae; Fabaceae) in an explorative approach, by quantifying five different traits simultaneously: biomass, water use efficiency (WUE), relative water content (RWC), chlorophyll content (NDVI), and root/shoot ratio. Since crop wild relatives are important resources for breeding programs, we analyzed both wild and cultivated accessions, most of which have never been evaluated for drought resistance before. We demonstrate that the five traits are affected very differently by drought in the studied accessions, with significant correlations existing only between the biomass and WUE indicators (r=0.39), and between the RWC and NDVI indicators (r=0.40). When grouping accessions by subgenus or by species, large intraspecific and withinsubgenus variation was found. For this reason, we performed a cluster analysis, which grouped the accessions into five distinct clusters with similar response profiles. We also correlated the drought resistance for each accession to local climate variables at their original collection sites. The biomass, WUE, and RWC indicators were significantly correlated to annual precipitation (r=0.40, r=0.20, r=0.22, respectively), confirming that accessions from arid environments are generally more drought resistant. Our results demonstrate that the drought resistance of Phaseolinae beans is a multifaceted characteristic and cannot be simply quantified through biomass. Furthermore, the broader knowledge of the drought resistance of the accessions studied here may prove an invaluable resource for future crop production.

High-Resolution Disease Phenotyping Reveals Distinct Resistance Mechanisms of Tomato Crop Wild Relatives against Sclerotinia sclerotiorum.

Besides the well-understood qualitative disease resistance, plants possess a more complex quantitative form of resistance: quantitative disease resistance (QDR). QDR is commonly defined as a partial but more durable form of resistance and, therefore, might display a valuable target for resistance breeding. The characterization of QDR phenotypes, especially of wild crop relatives, displays a bottleneck in deciphering QDR's genomic and regulatory background. Moreover, the relationship between QDR parameters, such as infection frequency, lag-phase duration, and lesion growth rate, remains elusive. High hurdles for applying modern phenotyping technology, such as the low availability of phenotyping facilities or complex data analysis, further dampen progress in understanding QDR. Here, we applied a low-cost (<1.000 €) phenotyping system to measure lesion growth dynamics of wild tomato species (e.g., Solanum pennellii or Solanum pimpinellifolium). We provide insight into QDR diversity of wild populations and derive specific QDR mechanisms and their cross-talk. We show how temporally continuous observations are required to dissect end-point severity into functional resistance mechanisms. The results of our study show how QDR can be maintained by facilitating different defense mechanisms during host-parasite interaction and that the capacity of the QDR toolbox highly depends on the host's genetic context. We anticipate that the present findings display a valuable resource for more targeted functional characterization of the processes involved in QDR. Moreover, we show how modest phenotyping technology can be leveraged to help answer highly relevant biological questions.

Exploration and Collection of Root and Tuber Crop Germplasm in Southern Districts of Assam, India

An exploration was conducted in Southern districts of Assam comprising of Karbiyanglong, Dima Hansao, Hailakandi and Karimgunj regions. With diverse agro climate coupled with varied soil and rainfall pattern, these regions are best suited for cultivating tuber crops and play significant role in food security of tribals inhabited. In hilly areas, tuber crops were grown mainly in jhums and in homestead farming, while in plains they are grown in small pockets under mixed cropping. Of the four districts explored, diversity in yam and taro were maximum in Karbianglong and Dima Hasao offering good scope for taxonomic studies. Farmers Interviewed during exploration reported a declining trend in the production and the number of local varieties maintained in individual farms since the past decade. The factors include displacement by other crops, little research attention, drought, short shelf life, shortage and non availability of planting material, limited knowledge among youth and susceptablity to new pests and diseases. In the present mission, a total of eighty nine (89) tuber crop species comprising of thirty five (35) yam, twenty eight (28) taro, eight (8) sweet potato, six (6) xanthosoma, five (5) tapioca, four (4) arrow root, two (2) elephant yam and one species of Stemona were collected. The study revealed that there is ample scope for multi-crop explorations combining crop wild relatives and landraces diversity.

Disease Resistance-Based Management of Alternaria Black Spot in Cruciferous Crops

Alternaria black spots or blights in cruciferous crops have been devastating diseases worldwide and led to economic losses in broccoli, Chinese cabbage, kale, radish, rapeseed, etc. These diseases are caused by different &lt;i&gt;Alternaria&lt;/i&gt; spp., including &lt;i&gt;A. brassicae, A. brassicicola&lt;/i&gt; and &lt;i&gt;A. raphani&lt;/i&gt; transmitted from infected seeds or insect vectors. Efforts to excavate disease resistance traits of cruciferous crops against Alternaria black spots or blights have been demonstrated. Genetic resource of disease resistance was investigated in the wild relatives of cruciferous crops, and different cultivars were screened under different inoculation conditions. Development of the disease-resistant lines against Alternaria black spots or blights was also tried via genetic transformation of the cruciferous crops using diverse plant defence-associated genes. Plant immunity activated by pre-treatment with chemicals, i. e. β-amino-&lt;i&gt;n&lt;/i&gt;-butyric acid and melatonin, was suggested for reducing Alternaria black spots or blights in cruciferous crops. The disease resistance traits have also been evaluated in model plant Arabidopsis originating from different habitats. Various plant immunity-related mutants showing different disease responses from wild-type Arabidopsis provided valuable information for managing Alternaria black spots or blights in cruciferous crops. In particular, redox regulation and antioxidant responses altered in the &lt;i&gt;Alternaria&lt;/i&gt;-infected mutants were discussed in this review.

Genome editing to re-domesticate and accelerate use of barley crop wild relatives

Climate change threatens global food security, but the biggest impact will be in arid, low social-economic regions. To improve food security, new breeding technologies (NBTs) could be implemented for re-domestication of crop wild relatives (CWR). CWR harbor many beneficial traits, but it is difficult to incorporate these traits into conventional breeding programs. Thus, although genebanks hold significant collections of CWR, their potential has yet to be reached. Using barley as an example, we describe how using genebank collections, digital sequence information and NBTs, re-domesticated barley can be produced with improved characteristics, while retaining the resilience and adaptation of the original material. Lastly, we highlight some obstacles that need to be overcome for re-domesticates to be adopted.

Wild strawberry Fragaria vesca as potential source for phytonematode resistance

AbstractPhytonematode infections are a major constraint to agriculture and can cause pre-harvest losses of up to one-third of the crop in affected fields. With increasing restrictions on the use of chemical pesticides due to environmental and human hazards, and increasing nematode pressure due to climate change, soil degradation and agricultural intensification, more sustainable ways to manage such plant pests are needed to meet the growing demand for food. Therefore, the reproduction of thermophilic Meloidogyne spp. was evaluated in comparison with that of the northern root-knot nematode Meloidogyne hapla on the wild strawberry Fragaria vesca vs. semperflorens cv. Alexandria, a potential source of resistance to nematode infection. M. hapla showed a high reproductive rate in F. vesca, while the thermophilic Meloidogyne species tested showed significant lower reproductive rates. This suggests that F. vesca vs. semperflorens cv. Alexandria, although not resistant to the nematode species tested, could be used in a management system to down-regulate nematode pressure. In addition, this study helps to reinforce the importance of crop wild relatives in the search for resistance traits to support a more sustainable agriculture.

Bioprospecting for improved floral fragrance in wild sunflowers

Abstract Cultivated sunflower (Helianthus annuus) is not typically considered to have a pleasant floral fragrance. In field production, seed yield is often limited by pollination services, particularly in the production of hybrid seed. Improved floral fragrance, as determined by volatile organic compounds, may be a route to improving pollinator attraction for oilseed and confectionary production and could also add value to ornamental sunflowers. Wild relatives of H. annuus have a long history of being used to breed improved traits into cultivated varieties, yet it is unknown whether favorable scents are present in wild Helianthus species and thus an available resource for fragrance breeding. In order to assess the diversity of floral fragrance available in crop wild relatives, 30 diverse accessions of wild Helianthus as well as seven varieties of H. annuus spanning a domestication gradient were grown in greenhouse experiments and variation in floral volatiles was analyzed by solid phase microextraction-gas chromatography-mass spectrometry. While alpha-pinene made up a significant portion of the volatiles emitted for most taxa, there was substantial diversity present across the genus as well as within H. annuus. Most volatiles emitted were monoterpenoids with a significant share of sesquiterpenoids. The diversity identified here will inform further targeted study of which compounds affect pollinator attraction and health. Several wild accessions such as Helianthus debilis subsp. tardiflorus and Helianthus praecox subsp. praecox as well as open-pollinated domesticated accessions of H. annuus show promise for breeding for improved floral fragrance due to high volatile abundance and likely favorable compound compositions.

Post‐attachment resistance to Striga hermonthica in finger millet (Eleusine coracana)

AbstractFinger millet is a highly nutritious and climate‐resilient cereal crop. Despite its importance, finger millet productivity in East Africa trails other cereals due to several biotic and abiotic factors, including the parasitic weed, Striga hermonthica. Striga spp. are noxious parasitic weeds whose damage can result in 100% yield losses in sub‐Saharan Africa. The objective of our study was to determine differences in post‐attachment responses of a selection of genotypes. We germinated finger millet in Petri dishes, transferred them to rhizotrons and infected the roots with Striga that had been pre‐conditioned for 7 days at 30°C and subsequently pre‐germinated using GR24. Histological analysis was done on three distinct genotypes to determine the host–pathogen interactions. The attachment of Striga onto the host was observed 3 days after inoculation. LESK10, a wild genotype, and OKHALE1 (cultivated) consistently supported fewer Striga plants after inoculation, while GBK029646A, a cultivated finger millet, consistently supported the highest. Histological analysis recorded an incompatible reaction in both OKHALE1 and LESK10 and a compatible reaction in GBK029646A as early as 3 days after infection. Our results suggest the likely existence of novel resistance in crop wild relatives that will be valuable for developing durable resistance to Striga in elite finger millet varieties.

Cryoconservation of In Vitro Grown Shoot Tips of Cicer Microphyllum: A Crop Wild Relative of Chickpea

BACKGROUND: Cicer microphyllum Benth. is a crop wild relative (CWR) of chickpea (C. arietinum L.), that possess useful genes for cold and drought tolerance. The species is being conserved in the In Vitro Active Genebank for short- to medium – term conservation. Cryopreservation would be a useful complementary approach for its long-term conservation. OBJECTIVE: The current work aimed to develop an efficient cryoconservation protocol for cryobanking of C. microphyllum shoot tips. MATERIALS AND METHODS: In vitro shoot tips excised from 4-month old shoot cultures grown on B5 + 0.5 mg L-1 KIN + 0.1 mg L -1 NAA + 10 mg L -1 AgNO 3medium were cryoconserved using a droplet-vitrification technique. Post-thaw regrowth was evaluated after: (i) preculture medium (B5 basal, B5 + 3, 4, 6 and 10% sucrose), (ii) preculture incubation temperature (25 ± 2, 10, 8 and 22/5°C), (iii) PVS2 duration (10, 20, 30. 40, 50 and 60 min) and (iv) regrowth medium (B5) supplemented with 0.5 mg L-1 KIN + 0.1 NAA mg L-1 ; 0.5 mg L-1 KIN + 0.1 mg L-1 NAA + 10 mg L-1 AgNO3; 0.2 mg L-1 BAP + 10 mg L-1 AgNO3 ; 0.2 mg L-1 BAP + 20 mg L-1 AgNO3 and 0.2 mg L-1 BAP + 30 mg L-1 AgNO3,. RESULTS: In vitro shoot tips grown on B5 + 0.5 mg L-1 KIN + 0.1 mg L-1 NAA + 10 mg L-1 AgNO3, precultured on B5 + 6% sucrose at 10°C for 3 days, followed by PVS2 treatment for 20 min, unloading solution for 60 min and regrowth on B5 + 0.2 mg L-1 BAP + 20 mg L-1 AgNO3 resulted in highest survival (57%) and regrowth (40%) after cryoconservation. CONCLUSION: The standardized protocol was successfully used for cryobanking of in vitro shoot tips of C. microphyllum in the In Vitro Base Genebank of ICAR-NBPGR, New Delhi.

Fostering in situ conservation of wild relatives of forage crops.

Most plant conservation strategies generally overlook the intra-specific genetic diversity of crop gene pools. Focusing on forage crops and their wild relatives, we present a novel approach to address the conservation of these species on meadows. Two-thirds of Swiss agricultural land is green land, mostly used for forage purposes, and their genetic diversity is being threatened. We focused here on eight plant associations gathering at least 18 taxa considered priority crop wild relatives of forage crops. Since 2020, about 1,217 high-quality surfaces (representing 1,566 hectares) nationwide have been integrated into an innovative auction-based policy instrument dedicated to conserving these populations. Here, we report the benefits and hurdles of implementing this bottom-up approach and try to estimate the quality of conservation of the forage plants' CWR gene pool. Although we focus on the Swiss case, our approach to in situ conservation offers opportunities to effectively guide conservation in other contexts. We also discuss possible ways to improve CWR conservation policy, particularly the need to better consider the populations and habitat levels.

Utilization of crop wild relatives for biotic and abiotic stress management in Indian mustard [Brassica juncea (L.) Czern. & Coss.

Brassica juncea (L.) Czern. & Coss. (Indian mustard) is an economically important edible oil crop. Over the years, plant breeders have developed many elite varieties of B. juncea with better yield traits, but research work on the introgression of stress resilience traits has largely been lagging due to scarcity of resistant donors. Crop wild relatives (CWRs) are the weedy relatives of domesticated plant species which are left unutilized in their natural habitat due to the presence of certain undesirable alleles which hamper their yield potential, and thus, their further domestication. CWRs of B. juncea namely include Sinapis alba L. (White mustard), B. tournefortii Gouan. (African mustard), B. fruticulosa Cirillo (Twiggy turnip), Camelina sativa L. (Gold-of-pleasure), Diplotaxis tenuisiliqua Delile (Wall rocket), D. erucoides L. (White wall rocket), D. muralis L. (Annual wall rocket), Crambe abyssinica R.E.Fr. (Abyssinian mustard), Erucastrum gallicum Willd. (Common dogmustard), E. cardaminoides Webb ex Christ (Dogmustard), Capsella bursa-pastoris L. (Shepherds purse), Lepidium sativum L. (Garden Cress) etc. These CWRs have withstood several regimes of biotic and abiotic stresses over the past thousands of years which led them to accumulate many useful alleles contributing in resistance against various environmental stresses. Thus, CWRs could serve as resourceful gene pools for introgression of stress resilience traits into Indian mustard. This review summarizes research work on the introgression of resistance against Sclerotinia stem rot (caused by Sclerotinia sclerotiorum), Alternaria blight (caused by Alternaria brassicae), white rust (caused by Albugo candida), aphid attack, drought and high temperature from CWRs into B. juncea. However, various pre- and post-fertilization barriers due to different ploidy levels are major stumbling blocks in the success of such programmes, therefore, we also insightfully discuss how the advances made in -omics technology could be helpful in assisting various breeding programmes aiming at improvisation of stress resilience traits in B. juncea.

Genomic characterization and gene bank curation of Aegilops: the wild relatives of wheat.

Genetic diversity found in crop wild relatives is critical to preserve and utilize for crop improvement to achieve sustainable food production amid climate change and increased demand. We genetically characterized a large collection of 1,041 Aegilops accessions distributed among 23 different species using more than 45K single nucleotide polymorphisms identified by genotyping-by-sequencing. The Wheat Genetics Resource Center (WGRC) Aegilops germplasm collection was curated through the identification of misclassified and redundant accessions. There were 49 misclassified and 28 sets of redundant accessions within the four diploid species. The curated germplasm sets now have improved utility for genetic studies and wheat improvement. We constructed a phylogenetic tree and principal component analysis cluster for all Aegilops species together, giving one of the most comprehensive views of Aegilops. The Sitopsis section and the U genome Aegilops clade were further scrutinized with in-depth population analysis. The genetic relatedness among the pair of Aegilops species provided strong evidence for the species evolution, speciation, and diversification. We inferred genome symbols for two species Ae. neglecta and Ae. columnaris based on the sequence read mapping and the presence of segregating loci on the pertinent genomes as well as genetic clustering. The high genetic diversity observed among Aegilops species indicated that the genus could play an even greater role in providing the critical need for untapped genetic diversity for future wheat breeding and improvement. To fully characterize these Aegilops species, there is an urgent need to generate reference assemblies for these wild wheats, especially for the polyploid Aegilops.

Importance of agriculture for crop wild relatives conservation in Switzerland

Importance of agriculture for crop wild relatives conservation in Switzerland

Exploring the World of Mungbean: Uncovering its Origins, Taxonomy, Genetic Resources and Research Approaches

The mungbean is one of the important leguminous crops, holds great importance in agriculture and nutrition in Asian countries. It is a vital source of protein, playing a key role in vegetarian diets and offering versatility in culinary applications. The crop wild relatives and landraces are invaluable sources of novel genes and alleles, augmenting mungbean resilience against both biotic and abiotic stresses. Researchers have meticulously examined the roles of additive and dominant gene effects in governing vital traits, including seed weight, seed yield, plant height, days to flowering, and yield components. However, despite their potential, these genetic resources remain underutilized due to several constraints, encompassing interspecific hybridization barriers, limited trait evaluation data, and the absence of advanced breeding tools. Announcement of the VC1973A draft reference genome utilizing next-generation sequencing, have facilitated rapid DNA marker development, gene mapping, and the identification of candidate genes for complex traits, predominantly within the last decade. Reports on GBS analysis of mungbean relatively limited and mostly includes investigating population structure and LD in mungbean. This review offers a comprehensive overview of the origin, taxonomy, gene pool dynamics, and the pivotal role played by mungbean CWRs in ensuring agricultural sustainability and elevating crop improvement initiatives. Additionally, it discusses about genotypic characterization of CWRs, advances in sequencing technologies, QTLs mapping for various economically important traits and validation techniques that aid in confirming the QTLs found through GWAS.

Form and contour: breeding and genetics of organ shape from wild relatives to modern vegetable crops.

Shape is a primary determinant of consumer preference for many horticultural crops and it is also associated with many aspects of marketing, harvest mechanics, and postharvest handling. Perceptions of quality and preference often map to specific shapes of fruits, tubers, leaves, flowers, roots, and other plant organs. As a result, humans have greatly expanded the palette of shapes available for horticultural crops, in many cases creating a series of market classes where particular shapes predominate. Crop wild relatives possess organs shaped by natural selection, while domesticated species possess organs shaped by human desires. Selection for visually-pleasing shapes in vegetable crops resulted from a number of opportunistic factors, including modification of supernumerary cambia, allelic variation at loci that control fundamental processes such as cell division, cell elongation, transposon-mediated variation, and partitioning of photosynthate. Genes that control cell division patterning may be universal shape regulators in horticultural crops, influencing the form of fruits, tubers, and grains in disparate species. Crop wild relatives are often considered less relevant for modern breeding efforts when it comes to characteristics such as shape, however this view may be unnecessarily limiting. Useful allelic variation in wild species may not have been examined or exploited with respect to shape modifications, and newly emergent information on key genes and proteins may provide additional opportunities to regulate the form and contour of vegetable crops.