Widespread Trait Research Articles

Serotiny in southern hemisphere conifers

Serotiny is a widespread trait in angiosperms in the southern hemisphere; however, it is less common in conifers and has been little examined in the only two genera of southern conifers (Callitris and Widdringtonia) that have serotinous cones. There is variation across the family in the size of cones, the amount of seed contained and the time over which the cones stay closed on the plant. Cones from most of the species were collected in the field and various morphometric measurements made including cone wet and dry weight, the number of seeds contained and their likely viability. Cones from a selection of species with different cone sizes were heated to increasing temperatures, to investigate the ability of cones to protect the contained seeds from heat. In comparison to the flowering plants, serotiny has developed comparatively recently in southern conifers (in the last 10–20 million years). In Widdringtonia, serotiny is relatively weak, whereas in Callitris, it varies from strong to non-existent. Cone size and fertile-seed production across the two genera varies and the number of fertile seeds produced is positively related to the size of the cone. In some species, there are sterile seed-like bodies. These may have developed to confuse seed predators, so fertile seeds have a better chance of survival. Larger (heavier) cones are more effective in protecting the contained seeds from the heat of fires than are smaller ones. There is no simple relationship between the cone size and type of environment occupied by the species. In regions where fire is unlikely, predictable but mild or completely unpredictable, the species tend to be non-serotinous. In temperate regions where hot fires are likely to have been a selective agent, the species tend to be more strongly serotinous, although fire is not essential to open the cones. The community and environment in which a species has evolved is likely to have influenced the development of the degree of serotiny for each species and this may still be a variable property among populations of some species, depending on the fire regime of the area in which they grow.

Acyl-homoserine lactone-based quorum sensing in the Roseobacter clade: complex cell-to-cell communication controls multiple physiologies.

Bacteria have been widely reported to use quorum sensing (QS) systems, which employ small diffusible metabolites to coordinate gene expression in a population density dependent manner. In Proteobacteria, the most commonly described QS signaling molecules are N-acyl-homoserine lactones (AHLs). Recent studies suggest that members of the abundant marine Roseobacter lineage possess AHL-based QS systems and are environmentally relevant models for relating QS to ecological success. As reviewed here, these studies suggest that the roles of QS in roseobacters are varied and complex. An analysis of the 43 publically available Roseobacter genomes shows conservation of QS protein sequences and overall gene topologies, providing support for the hypothesis that QS is a conserved and widespread trait in the clade.

Adult neurogenesis and brain regeneration in zebrafish

Adult neurogenesis is a widespread trait of vertebrates; however, the degree of this ability and the underlying activity of the adult neural stem cells differ vastly among species. In contrast to mammals that have limited neurogenesis in their adult brains,zebrafish can constitutively produce new neurons along the whole rostrocaudal brain axis throughout its life.This feature of adult zebrafish brain relies on the presence of stem/progenitor cells that continuously proliferate,and the permissive environment of zebrafish brain for neurogenesis. Zebrafish has also an extensive regenerative capacity, which manifests itself in responding to central nervous system injuries by producing new neurons to replenish the lost ones. This ability makes zebrafish a useful model organism for understanding the stem cell activity in the brain, and the molecular programs required for central nervous system regeneration.In this review, we will discuss the current knowledge on the stem cell niches, the characteristics of the stem/progenitor cells, how they are regulated and their involvement in the regeneration response of the adult zebrafish brain. We will also emphasize the open questions that may help guide the future research.

Opening the gateway to enhanced Eucalyptus

Eucalyptus is the second most planted tree on earth. Despite this ranking, its mature breeding programs, clonal propagation and deployment and short rotation time make it a leading target for biotechnology improvement. The recently completed eucalyptus genome project provides an enormous opportunity for understanding and developing new traits for eucalyptus forestry. The main obstacle for widespread trait enhancement remains the recalcitrance of commercial eucalyptus clones to transformation and thus the lack of a suitable prototyping system for this species. We believe that the future success of trait development in eucalyptus will be enhanced by close collaboration between academic centers and industrial partners. Some of FuturaGene’s models for academic collaboration will be described in this presentation. An example of such potential collaborations may involve BRASUZ1, which constituted the germplasm base for the eucalyptus genome project. This key clone was donated by Suzano Pulp and Paper, FuturaGene’s parent, to the genome project. We will present our progress with the transformation protocol for BRASUZ1, which could provide a platform for collaborations. We will also present our perspective on the development of improved transgenic eucalyptus, and an outline for such development programs.

Taxonomic Chauvinism Revisited: Insight from Parental Care Research

Parental care (any non-genetic contribution by a parent that appears likely to increase the fitness of its offspring) is a widespread trait exhibited by a broad range of animal taxa. In addition to influencing the fitness of parent(s) and offspring, parental care may be inextricably involved in other evolutionary processes, such as sexual selection and the evolution of endothermy. Yet, recent work has demonstrated that bias related to taxonomy is prevalent across many biological disciplines, and research in parental care may be similarly burdened. Thus, I used parental care articles published in six leading journals of fundamental behavioral sciences (Animal Behaviour, Behavioral Ecology, Behavioral Ecology and Sociobiology, Ethology, Hormones and Behavior, and Physiology & Behavior) from 2001–2010 (n = 712) to examine the year-to-year dynamics of two types of bias related to taxonomy across animals: (1) taxonomic bias, which exists when research output is not proportional to the frequency of organisms in nature, and (2) taxonomic citation bias, which is a proxy for the breadth of a given article—specifically, the proportion of articles cited that refer solely to the studied taxon. I demonstrate that research on birds likely represents a disproportionate amount of parental care research and, thus, exhibits taxonomic bias. Parental care research on birds and mammals also refers to a relatively narrow range of taxonomic groups when discussing its context and, thus, exhibits taxonomic citation bias. Further, the levels of taxonomic bias and taxonomic citation bias have not declined over the past decade despite cautionary messages about similar bias in related disciplines— in fact, taxonomic bias may have increased. As in Bonnet et al. (2002), my results should not be interpreted as evidence of an ‘ornithological Mafia’ conspiring to suppress other taxonomic groups. Rather, I generate several rational hypotheses to determine why bias persists and to guide future work.

The Demographic Benefits of Belligerence and Bravery: Defeated Group Repopulation or Victorious Group Size Expansion?

Intraspecific coalitional aggression between groups of individuals is a widespread trait in the animal world. It occurs in invertebrates and vertebrates, and is prevalent in humans. What are the conditions under which coalitional aggression evolves in natural populations? In this article, I develop a mathematical model delineating conditions where natural selection can favor the coevolution of belligerence and bravery between small-scale societies. Belligerence increases an actor's group probability of trying to conquer another group and bravery increase the actors's group probability of defeating an attacked group. The model takes into account two different types of demographic scenarios that may lead to the coevolution of belligerence and bravery. Under the first, the fitness benefits driving the coevolution of belligerence and bravery come through the repopulation of defeated groups by fission of victorious ones. Under the second demographic scenario, the fitness benefits come through a temporary increase in the local carrying capacity of victorious groups, after transfer of resources from defeated groups to victorious ones. The analysis of the model suggests that the selective pressures on belligerence and bravery are stronger when defeated groups can be repopulated by victorious ones. The analysis also suggests that, depending on the shape of the contest success function, costly bravery can evolve in groups of any size.

Response to environmental change in rainbow trout selected for divergent stress coping styles

An extensive literature has documented differences in the way individual animals cope with environmental challenges and stressors. Two broad patterns of individual variability in behavioural and physiological stress responses are described as the proactive and reactive stress coping styles. In addition to variability in the stress response, contrasting coping styles may encompass a general difference in behavioural flexibility as opposed to routine formation in response to more subtle environmental changes and non-threatening novelties. In the present study two different manipulations, relocating food from a previously learned location, and introducing a novel object yielded contrasting responses in rainbow trout selected for high (HR) and low (LR) post stress plasma cortisol levels. No difference was seen in the rate of learning the original food location; however, proactive LR fish were markedly slower than reactive HR fish in altering their food seeking behaviour in response to relocated food. In contrast, LR fish largely ignored a novel object which disrupted feeding in HR fish. Hence, it appears that the two lines appraise environmental cues differently. This observation suggests that differences in responsiveness to environmental change are an integral component of heritable stress coping styles, which in this particular case, had opposite effects on foraging efficiency in different situations. Context dependent fitness effects may thus explain the persistence of stable divergence of this evolutionary widespread trait complex.

Bacterial catabolism of nonulosonic (sialic) acid and fitness in the gut

The term nonulosonic acid or sialic acid encompasses a varied group of nine-carbon amino sugars widely distributed among mammals and higher metazoans. Among bacteria, the ability to synthesize sialic acid was first examined in a small number of human pathogenic species that deposit sialic acid residues on their outer surface. New phylogenomic data suggest that the ability to synthesize sialic acid and sialic acid-like compounds is not a novel bacterial innovation but a much more widespread ancient trait. In contrast, the genes required for the catabolism of sialic acid are found only among pathogenic and commensal bacterial species. This ability to utilize sialic acid as a carbon source is correlated with bacterial virulence, especially, in the sialic acid rich environment of the gut. In this article, we present the most recent findings in sialobiology with a focus on sialic acid catabolism.

Detection of extracellular protease activity in different species and genera of ectomycorrhizal fungi

In northern forest ecosystems, most soil nitrogen (N) is in organic form and forest trees are largely dependent on ectomycorrhizal (ECM) fungi and their degradative abilities for N uptake. The ability of ECM fungi to acquire N from organic substrates should, therefore, be a widespread trait given its ecological importance. However, little is known about the degradative abilities of most ECM fungi as they remain untested due to problems of isolation or extremely slow growth in pure culture. In this paper, we present data on extracellular protease activity of 32 species of ECM fungi, most of which have not previously been cultured. Milk powder plates and zymograms were compared for detecting protease activity in these intractable species. In total, 29/32 of the species produced extracellular protease activity, but detection was method dependent. Growth on milk powder plates detected protease activity in 28 of 32 species, while zymograms only detected proteases in Amanita muscaria, Russula chloroides, Lactarius deterrimus and Lactarius quieticolor. The study supports the hypothesis that protease excretion is a widespread physiological trait in ECM fungi and that this ability is of considerable significance for nitrogen uptake in forest ecosystems.

Evidence of alarm pheromones in the venom ofPolistes dominulusworkers (Hymenoptera: Vespidae)

AbstractThe active and coordinating capacity of defending the nest is a key feature of social insects. The present study investigates the presence of alarm pheromones in the venom of workers of the social wasp,Polistes dominulus. Laboratory experiments were performed with caged colonies ofP. dominulususing a wind tunnel apparatus to test the behavioural response of workers to venom released by other workers and to venom extracts. Contrary to that previously reported for European paper wasps, the present results show that the venom is the source of alarm pheromones. Field experiments combining a visual (black target) and a chemical stimulus (venom extract) were performed to test the effect of the venom on the reaction of colonies. Wasps leave the nest, land on the visual target and attack the target significantly more once exposed to venom extract plus target than to solvent plus target. This work shows that the venom ofP. dominulusworkers elicits an alarm response, reduces the threshold for attack and acts as an attractant on targets. These results usingP. dominulusindicate that, in both American and European species, colony defence is based on the same features, suggesting that chemical alarm is a widespread trait in the genusPolistes.

Manipulation of primary sex-ratio: an updated review

Some bird species would be able to manipulate primary sex ratio, i.e. the proportion of male and female offspring at the laying time. Such trait could be considered being mostly under maternal control. Nevertheless, the exact mechanism involved remains undetermined. Knowledge of the mechanism would contribute to any assessment of its cost in terms of resources andyor time, which would be important to formulate predictions of those scenarios where it could have evolved. In fact, small costs of sex ratio control could overcome the adaptive value of adjusting the proportion of sexes in the progeny. Pike and Petrie (2003) published an excellent review on the potential mechanism involved. However, many new experimental and correlational evidences have appeared from that date, providing new and interesting perspectives. Thus, hormonal control is obtaining strong support from recent findings. The present review updates the current knowledge on this subject with emphasis on the question of whether sex ratio manipulation is a widespread trait among avian taxa. Finally, future directions for research, including not only those related to the mechanism per se, but also those linked to conditions necessary for the evolution of this trait, are presented. Thus, the necessity of determining fitness functions of male and female offspring and both parents, as well as the problem of if this trait is the result of a evolutionary constraint or strategy, are also addressed.

Thinking about Feathers: Adaptations of Golden Eagle Rectrices

“Happy is the man whose lot it is to know The secrets of the earth.” EuripidesThe striking black and white plumage of the juvenile Golden Eagle (Aquila chrysaetos) provides an excellent opportunity to examine the possible selective forces influencing the strategic placement of dark pigment in birds. The conflict between opposing selective pressures (first, toward large white patches, which may allay aggression in adults, and second, toward dark plumage to promote camouflage and limit solar and abrasive wear) provides the stage whereon are revealed a score of pigmentation traits of potential adaptive value.The general pigmentation trend is for zones that are more exposed to the sun to be darker than elsewhere. More specifically: (1) for rectrices and remiges, outer webs are darker than inner; (2) for those few feathers (e.g., central rectrices, some scapulars, and some tertials), where both inner and outer webs are heavily and nearly equally solar exposed, pigmentation is supplied similarly on both webs; (3) outermost primaries and rectrices are darkest of all and are structurally similar; (4) for central rectrices, subject to high levels of abrasion with substrate, the tip is paler (resultant flexibility may limit breakage); and (5) pigment is heavier along or on the rachis than on the webs.Many of the traits listed above for the Golden Eagle are also found in other families of birds. Traits of the tail common to many species were a terminal pale tip, a subterminal dark band, rachis darker than vane, and outer webs darker than inner for both remiges and rectrices. The most widespread traits likely have adaptive value.

Multiple, recurring origins of aposematism and diet specialization in poison frogs.

Aposematism is the association, in a prey organism, of the presence of a warning signal with unprofitability to predators. The origin of aposematism is puzzling, because of its predicted low probability of establishment in a population due to the prey's increased conspicuousness. Aposematism is a widespread trait in invertebrate taxa, but, in vertebrates, it is mostly evident in amphibians, reptiles, and fishes. Poison frogs (Dendrobatidae) are one of the most well known examples of the co-occurrence of warning coloration and toxicity. This monophyletic group of mostly diurnal leaf-litter Neotropical anurans has both toxic/colorful and palatable/cryptic species. Previous studies suggested a single origin of toxicity and warning coloration, dividing the family in two discrete groups of primitively cryptic and more derived aposematic frogs. Recent molecular phylogenetic analyses using mostly aposematic taxa supported this conclusion and proposed a single tandem origin of toxicity and conspicuous warning coloration. By using expanded taxon and character sampling, we reexamined the phylogenetic correlation between the origins of toxicity and warning coloration. At least four or five independent origins of aposematism have occurred within poison frogs; by using simulations, we rejected hypotheses of one, two, or three origins of aposematism (P < 0.002). We also found that diet specialization is linked with the evolution of aposematism. Specialization on prey, such as ants and termites, may have evolved independently at least two times.

Resistance to serum complement, iss, and virulence of avian Escherichia coli.

Control of avian colibacillosis is hampered by lack of easily identifiable markers for virulent Escherichia coli. Resistance to serum complement appears to be a widespread trait of virulent avian E. coil, suggesting that bacterial factors promoting survival in serum may be useful in discriminating between virulent and avirulent isolates. Such distinguishing factors may prove useful in diagnostic protocols or as targets in future colibacillosis control protocols. Interestingly, the factors responsible for resistance to complement differ in the E. coli isolated from mammalian and avian hosts, which may reflect differences in the nature of avian and mammalian colibacillosis. In some cases, genetic determinants for serum complement resistance in avian E. coli are found on aerobactin- or Colicin V-encoding plasmids. One such gene, iss, first described for its role in the serum resistance associated with a ColV plasmid from a human E. coli isolate, occurs much more frequently in isolates from birds with colibacillosis than in faecal isolates from healthy birds. Efforts to identify the genomic location of iss in a single, virulent avian E. coli isolate have revealed that it occurs in association with several purported virulence genes, all linked to a large conjugative R plasmid. At this time, it is not known whether iss merely marks the presence of a larger pathogenicity unit or is itself a contributor to virulence. Nevertheless, the presence of the complement-resistance determinant, iss, may be a marker of virulent avian E. coli exploitable in controlling avian colibacillosis.

Mutants of the carotene cyclase domain of al-2 from Neurospora crassa.

Phytoene synthase and carotene cyclase, two key enzymes in carotenoid biosynthesis, are encoded by two separate genes in bacteria and plants, but by a single bifunctional gene in fungi. The cyclase function has been demonstrated for the products of the genes crtYB from the basidiomycete Xanthophyllomyces dendrorhous, and for carRA and carRP from the zygomycetes Phycomyces blakesleeanus and Mucor circinelloides, respectively. These three genes are highly similar to al-2 from Neurospora crassa. Taking advantage of the high proportion of the final product of the carotenoid pathway that accumulates Neurospora when mycelium is illuminated at low temperature, we have isolated two mutants with a pale reddish pigmentation. Both mutants are complemented by the wild-type al-2 gene, and carry mutations in the al-2 domain to which cyclase activity has been attributed in other fungi. The mutants lack neurosporaxanthin and accumulate an unidentified reddish carotenoid, as shown by column chromatography and HPLC. The chemical and spectrophotometrical properties of this carotenoid are consistent with the absence of carotenoid cyclization, and indicate that the product of al-2 is bifunctional. The existence of a single gene responsible for phytoene synthase and carotene cyclase thus seems to be a widespread trait among filamentous fungi, as shown by the examples now known in a basidiomycete, two zygomycetes and one ascomycete.

Secretory structures on the leaf rachis of Caesalpinieae and Mimosoideae (Leguminosae): implications for the evolution of nectary glands

Cup- or sometimes slit-shaped nectary glands on the rachis are a widespread trait in the legume subfamily Mimosoideae, especially in derived tribes. Their spotty occurrence in genera that appear to be basal has led to uncertainty about when in the mimosoid radiation this character evolved. Until now, specialized rachis glands were unknown in caesalpinioids thought to be related to ancestral mimosoids. We report here the occurrence of rachis glands in seven of the ten species of the Paleotropical genus Erythrophleum, a member of the Dimorphandra group of caesalpinioids thought to include the sister group(s) of mimosoids. The histological structure and location of Erythrophleum glands suggest homology with those of mimosoids; these glands are simpler structurally than rachis glands of any known mimosoid. The Erythrophleum glands differ from those of most mimosoids in the following respects: (1) they are smaller than glands of mimosoids; (2) the secretory surface is sunken in a pit capped by a small round pore rather than exposed on a broad concave or flat surface; (3) a smaller number of cells are involved in production and secretion of nectar; (4) vascular supply to the nectary is less extensive; and (5) mechanical support tissue (sclerenchyma) is less extensive and less organized. Rachis glands appear to be absent in the nine other genera included in the Dimorphandra group. We also report the occurrence of other secretory structures (patches of glandular trichomes) on the rachis of some Caesalpinieae and Mimoseae that lack specialized nectary glands and suggest that these patches of trichomes are primitive homologues of more organized glands. We discuss the significance of these glands and of the patches of trichomes for understanding relationships among primitive mimosoids and related caesalpinioids, and for understanding the origin of ant-guard defenses typical of many mimosoids.

Fire and resprouting in Mediterranean ecosystems: insights from an external biogeographical region, the mexical shrubland

We investigated modes of regeneration of dominant species of the mexical vegetation after fire. The mexical shrubland shows a remarkable structural, morphological, and floristic similarity to Mediterranean-type vegetation and is considered a relict of the Madro-Tertiary Geoflora under a non-Mediterranean climate. This vegetation provides an ideal scenario to test the role of fire in Mediterranean ecosystems because historical fire occurrence is absent and the species assembly is constituted mostly by Madro-Tertiary elements and Neotropical species (some of them, endemic species from Mexico). The existence of congeneric species of the California chaparral allows us to determine the regeneration ability of these communities after fire in relation to resprouting and seeding strategies, which are widespread modes reported in the Mediterranean-type vegetation. By the experimental application of fire in the two biogeographical groups of species, we tested the hypothesis that low resprouting ability of California congeneric species (Madro-Tertiary species) after fire would indicate that fire has played an important selective force in the resprouting habit. A low resprouting ability in the Neotropical group of species would suggest that fire has molded the set of species dominating fire-prone environments.Our results indicated that resprouting is a widespread trait in the mexical species characterized by the presence of lignotubers and burls. Resprouting can be considered an ancient trait, probably linked to losses of aboveground biomass, that became a pre-adaptation in Mediterranean fire-prone communities. The Neotropical group of species showed less ability to regenerate after fire, and small plants were more likely to die after disturbance in this group than in the Madro-Tertiary group. The resprouting feature and the seeder strategy of other species after a fire in the mexical shrubland are similar to Mediterranean-type ecosystems, emphasizing their common origin and the relevance of phylogenetic and biogeographical studies to explain current patterns of vegetation.

Andromonoecy and fruit set in three genera of the Proteaceae

It has been suggested by some authors that the low fruit to flower ratio in some Proteaceae is due to andromonoecy, while others, looking particularly at Banksia , have not been able to find evidence for male flowers in the inflorescences. Stirlingia latifolia, Xylomelum occidentale and X. angustifolium are clearly andromonoccous, while no evidence for this condition could be found in Brabejum stellatifolium. Production of fertile fruit is related to andromonoecy in Xylomelum and S. latifolia but not in Brabejum. It is unlikely that all-encompassing solutions will be found to what initially seem to be widespread traits in the family, especially in regard to pollination biology, as the genera in the family occupy widely different environments and have very diverse ecological ranges.

Andromonoecy and fruit set in three genera of the Proteaceae

It has been suggested by some authors that the low fruit to flower ratio in some Proteaceae is due to andromonoecy, while others, looking particularly at Banksia , have not been able to find evidence for male flowers in the inflorescences. Stirlingia latifolia, Xylomelum occidentale and X. angustifolium are clearly andromonoccous, while no evidence for this condition could be found in Brabejum stellatifolium. Production of fertile fruit is related to andromonoecy in Xylomelum and S. latifolia but not in Brabejum. It is unlikely that all-encompassing solutions will be found to what initially seem to be widespread traits in the family, especially in regard to pollination biology, as the genera in the family occupy widely different environments and have very diverse ecological ranges.

Progesterone induces bright orange throat coloration in female Petrosaurus mearnsi

Abstract Female Petrosaurus mearnsi develop orange throat coloration when gravid. This coloration was induced in the nonbreeding season (late fall) by exogenous progesterone delivered by subcutaneous implantation in Silastic capsules or intramuscular injection. Color change was first apparent after five days of administration. The time course of brightening was similar for the two methods. Color change was first apparent after five days, and was detectable in most females receiving implants after six days. For both routes of administration, maximum brightening usually occurred within three days of the time that brightening was first detected. Following removal of implants or termination of daily injections, the throat coloration of most females had begun to fade within 25 to 30 days. However, two injected females did not fade at all after sixty days and none faded completely to pretreatment coloration. This suggests that endogenous steroid production by early winter is insufficient to induce brightening, but it might maintain some degree of artificially induced brightening. Because progesterone has also been shown to induce orange female coloration in a distantly related phrynosomatid species and two species of crotaphytids, we hypothesize that induction of bright female secondary sexual coloration by progesterone may be a widespread trait in iguanian lizards.