West Pacific Ocean Research Articles

Population genetic structure and mixed stock analysis of the green sea turtle, Chelonia mydas, reveal reproductive isolation in French Polynesia

The green turtle, Chelonia mydas, is a migratory marine species with a circumglobal distribution in tropical and temperate waters. Its natal homing behavior leads to a complex genetic structure with genetically differentiated populations that breed separately and mix within the same foraging grounds. Delineating the boundaries of these populations and their connectivity to feeding grounds is important for the management of this species, classified as endangered on the IUCN red list. Here, we examined the genetic structure and the origin of the green turtle in French Polynesia with 239 samples collected during nesting or hatchling events and 204 samples collected outside of nesting events, across 21 islands. Amplification of the 770pb mtDNA control region fragment, the standard base used to characterize haplotype diversity in this species, revealed 23 haplotypes including three novel ones, belonging to 6 different lineages. Haplotype diversity in the rookeries was 0.615, and nucleotide diversity was 0.019, values similar to those in the North West Pacific and Western Indian Oceans, two regions recognized as genetic diversity hotspots for C. mydas. The genetic structure between the Leeward and Windward Islands of the Society archipelago was found to be significant with pairwise Fst index and φst distance. Island groups (Windward Islands, Leeward Islands, Tuamotu) were genetically different from all other identified Pacific management units, with a weak differentiation between American Samoa and Leeward Islands. A mixed-stock analysis for the French Polynesian mixture revealed an exclusive contribution from the French Polynesian rookeries, with negligible input from the other Pacific populations. This study provides the first assessment of the genetic structure of green turtle populations within French Polynesia and fills an essential data gap regarding the genetic diversity of the species and its connectivity to other feeding grounds in the Pacific Ocean. The French Polynesian populations appear to be important contributors to the overall genetic diversity of the species, isolated from other Pacific populations, thus making them essential within the Pacific region. These results have important implications for the conservation of the species at both local and regional scales.

Metal Accumulations in Two Extreme-Environment Amphipods, Hadal Eurythenes gryllus and Antarctic Pseudorchomene plebs

The hadal zone and Antarctic Ocean are two of the least-explored habitats. Knowledge about human impacts on these two extreme environments is limited. Here, we analyzed the metal accumulations of two amphipod species, Eurythenes gryllus, from the Mariana Trench (6040 m, 11.36° N, 142.41° E) in the West Pacific Ocean, and Pseudorchomene plebs, from the Ross Sea (600 m, 77.12° S, 167,67° E) in the Antarctic. Bioaccumulation of thirteen elements (Na, Mg, K, Ca, Cu, Fe, Al, Cr, Mn, Zn, As, Se, and Cd) in three tissues (exoskeleton, leg muscle, and gut) of the two amphipods was investigated using inductively coupled plasma mass spectrometry (ICP-MS). Comparing the trace element concentrations between the different amphipoda species, we found higher element concentrations in the Antarctic amphipod, and an oligotrophication of the Mariana Trench. The concentrations of Cu, Zn, As, and Se in the three tissues all had a significant difference in abundance, and the Cd in the gut of P. plebs was comparably higher than that in E. gryllus, consistent with special environment adaptation. Compared with non-abyssal and shallow water decapoda and amphipoda species, hadal amphipods possessed comparably higher concentrations of Cd and Cr elements and displayed a very high environmental specificity for amphipods’ metal-element bioaccumulation strategy. This study reveals the amphipods of remote and uncontaminated areas as potential indicator species for metal-element bioaccumulation to measure anthropogenic impacts.

Genomic analyses indicate two blue swimmer crab species in Australia, evidence for natural interspecific hybridization and genetic structure within species with implications for fisheries management and stock enhancement

Blue swimmer crab species are widely distributed in Indian and west Pacific Oceans including the coastline around Australia and have been identified as potential candidates for stock enhancement. A recent taxonomic review revealed the presence of two blue swimmer crab species in Australia, namely Portunus armatus which is found around most of the Australian coastline, and Portunus pelagicus which is found in the northern coast where it is sympatric with P. armatus. It is important to understand population structure and genetic diversity of Portunus spp. to efficiently manage stocks. In the present study we investigated species classification and population structure of Portunus spp. in Australia using full and partial genomic information, namely mitochondrial COX1 gene sequences derived from whole genome sequencing and single nucleotide polymorphic (SNP) markers developed from partial genome sequencing. Blue swimmer crab samples were collected from the western (n = 52), northern (n = 17) and eastern (n = 110) coasts of Australia. Genetic diversity and population genetic structure were assessed for within and between region variation. Our genomic results indicated the presence of two blue swimmer crab species in Australia. One, namely, P. pelagicus was found only in Northern Territory (Darwin), and other, namely P. armatus was found around Australia. There was evidence of natural hybridisation between two species in Northern Territory (Darwin) where they were sympatric. P. armatus populations from the western, northern and eastern regions were genetically different although there were no significant genetic differences observed between the Queensland and New South Wales populations nor between the two neighbouring populations in Western Australia. Results found in the present study supports the view that the P. armatus populations in western, northern and eastern regions of Australia should be treated as at least three different stocks. A lack of genetic structuring along the eastern coast suggests blue swimmer crabs can be considered as a single stock along the sampled range at least in relation to fisheries enhancement, release programs and broodstock management.

Four new Solenogastres (Mollusca, Aplacophora) from the South China Sea and paraphyly of Proneomeniidae Simroth, 1893

Solenogastres and Caudofoveata (Aplacophora) remain some of the least known molluscs, despite ubiquity in the marine environment and importance in understanding molluscan evolution. The use of new morphological techniques and development of DNA barcode libraries have helped make specimen identification easier. However, for solenogasters, using histology for identification and adequate description of species remains necessary in most cases. This, together with the facts that knowledge about solenogaster species distributions is biased and that most species were described from one or very few individuals, explains why many open questions about the actual distribution, intra- and interspecific variability, etc., remain. We performed an integrative taxonomic study of eight specimens of solenogasters from the South China Sea (West Pacific Ocean) thatresulted in the identification of four new species of Proneomeniidae. Species identification and description following the established diagnostic characters were straightforward. However, phylogenetic analysis of molecular data obtained from these specimens and other members of Proneomeniidae indicate that the family is polyphyletic. We recovered representatives of two other families, Epimeniidae (Epimenia) and Strophomeniidae (Anamenia), nested within Proneomeniidae with strong support. Ancestral character state reconstruction indicates that characters commonly used in solenogaster taxonomy, such as the radula and foregut glands, may be more evolutionarily labile in this group than previously known. Therefore our work fills knowledge gaps regarding the diversity and distribution of members of this family but raises important questions about solenogaster taxonomy and systematics that should be further assessed with additional markers and broader taxon sampling. ZooBank: urn:lsid:zoobank.org:pub:BCADACD6-9AD0-442A-AD64-031BA8D88599

Biocalcification crisis in the continental shelf under ocean acidification

Ocean acidification (OA) is a persistent challenge for humans and is predicted to have deleterious effects on marine organisms, especially marine calcifiers such as coral and foraminifera. Benthic foraminifera is an important component of sediment in the continental shelf, while little is known about the impact of ocean acidification on benthic foraminifera both at the community and individual level and associated calcium carbonate deposition. We conducted eight months continued culture experiment under the scenario of 400, 800, 1200 and 1600 ppm pCO2 gradients on living benthic foraminifera from four stations in the continental shelf of the West Pacific Ocean. Statistic results showed OA had a negative effect on the abundance of benthic foraminifera. In contrast, the diversity increased roughly under OA conditions implying OA might stimulate the emergence of rare species and promote community diversity to some extent. In addition, we confirmed that the offshore area wasn’t the refuge for benthic foraminifera while the nearshore one had more resistance to moderate acidification. Calcareous species Protelphidium tuberculatum was the dominant species occupying on average 75% in all treatments and its shell diameter, weight and thickness showed a decrease, indicating the decrease of calcification of benthic foraminifera. A relationship between the weight of P. tuberculatum and pCO2 (R2 = 0.96) was established. Based on the present work, calcareous benthic foraminifera deposited 8.57 × 104 t calcium carbonate per year and this might reduce by nearly half and 90% under 800 and 1200 ppm scenarios, which indicates a biocalcification crisis under ongoing OA. This work shows an analogy for palaeoceanic OA and also provides new insights into the sediment of calcium carbonate in the future.

Crustal Structure of the Jurassic Quiet Zone in the West Pacific Ocean: Insights from 2D Multichannel Seismic Reflection Profiles

Crustal Structure of the Jurassic Quiet Zone in the West Pacific Ocean: Insights from 2D Multichannel Seismic Reflection Profiles

New constraints of terrestrial and oceanic global gross primary productions from the triple oxygen isotopic composition of atmospheric CO2 and O2

Representations of the changing global carbon cycle under climatic and environmental perturbations require highly detailed accounting of all atmosphere and biosphere exchange. These fluxes remain unsatisfactory, as a consequence of only having data with limited spatiotemporal coverage and precision, which restrict accurate assessments. Through the nature of intimate coupling of global carbon and oxygen cycles via O2 and CO2 and their unique triple oxygen isotope compositions in the biosphere and atmosphere, greater insight is available. We report analysis of their isotopic compositions with the widest geographical and temporal coverage (123 new measurements for CO2) and constrain, on an annual basis, the global CO2 recycling time (1.5 ± 0.2 year) and gross primary productivities of terrestrial (~ 170–200 PgC/year) and oceanic (~ 90–120 PgC/year) biospheres. Observed inter-annual variations in CO2 triple oxygen isotopic compositions were observed at a magnitude close to the largest contrast set by the terrestrial and oceanic biospheres. The seasonal cycles between the east and west Pacific Ocean were found to be drastically different. This intra-annual variability implies that the entire atmospheric CO2 turnover time is not much longer than the tropospheric mixing time (less than ~ 5 months), verifying the derived recycling time. The new measurements, analyses, and incorporation of other global data sets allow development of an independent approach, providing a strong constraint to biogeochemical models.

Sounds of snapping shrimp (Alpheidae) as important input to the soundscape in the southeast China coastal sea

As a biological sound source widely distributed in temperate and tropical coastal waters, snapping shrimp produce strong pulses which can serve as honest signals to indicate habitat-specific soundscape. The past decade has witnessed the growing interest in investigating the acoustical activity of snapping shrimp across many shallow waters including the coastal line of the west Pacific Ocean. It was extended to the Southeast China coastal area where snapping sounds and the associated soundscape were recorded at four sites. Customized codes incorporating bandwidth and amplitude threshold operations were developed to detect snaps from the ambient noise to estimate snap rate and extract snaps individually. The subsequent analysis suggested that snaps recorded at different sites were unanimously stronger than background noise. Sound pressure level of the snaps ranged from 150 dB to 190 dB (re 1 μPa). The characteristics of snaps, including sound pressure level, duration, peak frequency, -3dB bandwidth from different sites are examined to evaluate the variability across the sites. Though snapping pulses had peak frequencies and the -3 dB bandwidth consistently below 10 kHz, snaps had considerable energy extending to the high frequency range over 200 kHz. The analysis of the acoustic data received for 7 consecutive days at one site indicated that the snap rate corresponded to tidal level periodicity. A high tide was accompanied with a local high snap rate regardless of light but this local snap rate peak was much higher at night. The mean rate fluctuated between 2000 and 4000 snaps per minute and more snaps were recorded after sunset suggesting that snapping shrimp living in the area snapped in response to light. These data may indicate that snaps are important communication means in light-limited condition and deepen our understanding on the correlation of snapping behavior and ecological environments.

Temporospatial Variation, Chemical Composition, and Source Resolution of PM2.5 in the Southeastern Taiwan Island

This study investigated the temporospatial variation, chemical composition, and source resolution of fine particles (PM2.5) in the southeastern seas of the Taiwan Island. 24-hr PM2.5 was sampled simultaneously at two remote sites, the Green Island (West Pacific Ocean; WPO) and the Kenting Peninsula (northern Bashi Channel; BC), in four seasons. After sampling, the chemical fingerprints of PM2.5 were characterized and further applied to resolve the potential sources of PM2.5 and their contribution by using a receptor model on the basis of chemical mass balance (CMB), enrichment factor (EF), and backward trajectory simulation. It showed that PM2.5 concentrations in winter (10.8 µg m–3) and spring (12.0 µg m–3) (i.e., during the period of Asian Northeastern Monsoons; ANMs) were higher than those in summer (4.0 µg m–3) and fall (6.6 µg m–3). In terms of chemical composition of PM2.5, secondary inorganic aerosols (SIAs = NO3–, SO42–, and NH4+) (56.7–67.2%) were the dominant component of water-soluble ions (WSIs) in PM2.5, while crustal elements (Mg, Al, Ca, Fe, and K) (44.0–61.2%) dominated the metallic contents in PM2.5. High EF values (> 10) showed that V, Mn, Ni, Cu, and Zn were potentially contributed from anthropogenic sources. Moreover, organic carbon (OC) (0.6 µg m–3) was superior to elemental carbon (EC) (0.3 µg m–3) in PM2.5. The OC/EC ratios higher than 2.0 showed the potential chemical formation of secondary organic aerosols (SOAs) in the atmosphere in winter and spring. Trajectory simulation indicated that high PM2.5 concentrations were mostly originated from North and Central China, Japan islands, and Korea Peninsula. Major sources of PM2.5 resolved by CMB receptor modeling were ordered as: sea salts (19.9%) > fugitive dust (19.8%) > industrial boilers (oil-fired) (10.8%) > secondary sulfate (9.8%) > mobile sources (8.0%).

Long-range transport of atmospheric speciated mercury from the eastern waters of Taiwan Island to northern South China Sea

This study explored the temporospatial distribution, gas-particle partition, and pollution sources of atmospheric speciated mercury (ASM) from the eastern offshore waters of the Taiwan Island (TI) to the northern South China Sea (SCS). Both gaseous and particulate mercury were simultaneously sampled at three remote sites in four seasons. The average concentrations of gaseous elemental mercury (GEM), gaseous oxidized mercury (GOM), and particulate bound mercury (PBM) were 2.05 ± 0.45 ng/m3, 19.17 ± 5.39 pg/m3, and 0.11 ± 0.06 ng/m3, respectively. The concentrations of GEM and PBM in the cold seasons were higher than those in the warm seasons, but those of GOM had an opposite trend. In terms of gas-solid partition, ASM was apportioned as 91.3–97.3% of GEM and 2.7–8.7% of GOM and PBM. The average concentrations of GEM, GOM, and PBM at the Green Island (GI) were 2.21 ± 0.47 ng/m3, 22.31 ± 5.35 pg/m3, and 0.12 ± 0.06 ng/m3; those at the Kenting Peninsula (KT) were 2.11 ± 0.43 ng/m3, 20.57 ± 4.38 pg/m3, and 0.11 ± 0.06 ng/m3; and those at the Dongsha Islands (DS) were 1.84 ± 0.40 ng/m3, 15.19 ± 3.58 pg/m3, and 0.08 ± 0.05 ng/m3, respectively. Overall, the spatial distribution of ASM concentrations showed the order as: GI > KT > DS. Air masses blown mainly from the West Pacific Ocean (WPO) and SCS in summer showed the lowest ASM concentrations. Oppositely, high ASM concentrations were commonly observed in spring and winter when polluted air masses were blown by Asian Northeastern Monsoons (ANMs). The transport routes of polluted air masses were originated mainly from North China, Central China, Northeast China, Korea and Japan, and mostly passed through the urban and industrial regions in the northeastern Asian countries.

Cryptic Lineage and Genetic Structure of Acanthopagrus pacificus Populations in a Natural World Heritage Site Revealed by Population Genetic Analysis

Recent studies have revealed extensive genetic differentiation among some populations of marine taxa that were previously believed to be essentially homogeneous because larvae are widely dispersed in ocean currents. Acanthopagrus pacificus is a commercially and ecologically important teleost fish that is endemic to shallow coastal waters and estuaries of some tropical and sub-tropical areas in the West Pacific Ocean. Here, we examined genetic structure and the inferred demographic history of A. pacificus populations from mtDNA control region sequence data. A 677–678 base-pair fragment was sequenced from 159 individuals sampled at three localities across the West Pacific Ocean. Haplotype diversity was high, ranging from 0.915 to 0.989, while nucleotide diversity was low to medium, ranging from 0.8% to 2.60%. Analysis of molecular variance (AMOVA) showed significant genetic subdivision (FST = 0.155, p < 0.05) among sampled populations while pairwise FST estimates also revealed strong genetic differentiation among populations indicating that gene flow was restricted. Two distinct cryptic lineages were identified that were estimated to have diverged during the Pleistocene. In summary, contemporary factors including regional oceanic currents and self-recruitment are considered to have played significant roles in producing the population structure in this fish. In particular, the genetic information generated in the current study will allow appropriate fisheries management and conservation strategies to be developed for this important local fish in the waters around Iriomotejima Island, a World Heritage site.

Effect of SST in the Northwest Indian Ocean on Synoptic Eddies over the South China Sea-Philippine Sea in June

Synoptic eddies (with a period of two to eight days) are active in the South China Sea-Philippine Sea (SCS-PS) and control weather variations. In addition, the intensity and frequency of synoptic eddies may change along with variations in sea surface temperatures (SST). This paper presented the influence of SST in the northwest Indian Ocean on synoptic eddies in the lower troposphere over the SCS-PS in June. Our statistical analysis showed a significant negative correlation between the SST in the northwest Indian Ocean and the synoptic scale eddy kinetic energy (EKE) in the SCS-PS. By analyzing the EKE budget of synoptic eddies, we found that the variation in the synoptic scale EKE over the SCS-PS is mainly due to the change in the monthly zonal wind gradient, which affects the barotropic energy conversion between the monthly mean flow and the synoptic eddies. Additionally, the northwest Indian Ocean SST modulates the monthly flow over the SCS-PS by alternating the strength of the Walker circulation in the west Pacific and Indian Ocean. Finally, the influence of SST in the northwest Indian Ocean on EKE in the SCS-PS was reproduced using the simplified atmospheric general circulation model, SPEEDY.

New Echinoderes (Kinorhyncha: Cyclorhagida) from Mexico: Molecular barcoding demonstrate species delimitation between highly similar morphospecies

Two new species of Echinoderes are described from Mexico. Echinoderes abeli sp. nov. is described from the archipelago Islas Marias in the Mexican Pacific Ocean west coast. The species is characterized by very short and stout lateral terminal spines, middorsal spines on segments 4 to 8 and lateroventral spines on segments 6 to 9, lateroventral tubes on segment 2 and 5, midlateral tubes on segment 4, and sublateral ones on segment 8, and in laterodorsal positions on segment 10, as well as glandular cell outlets type 2 in subdorsal positions segment 2. The second new species, Echinoderes wilberti sp. nov. is described from the Caribbean coast in Yucatan. The new species show great resemblance with another species, Echinoderes horni, that occurred at the same locality. The only notable difference is a pair of subdorsal tubes on segment 2, present in E. wilberti sp. nov. only. However, barcoding of COI demonstrated the two morphospecies differed genetically more than 8%. This result shows that small morphological differences might be supported by much more conspicuous molecular differences. Based on the high level of morphological similarity between E. wilberti sp. nov. and E. horni, as well as a third Caribbean species, Echinoderes parahorni, a species group, the E. horni group, is proposed to accommodate this potentially monophyletic group of species.This article is registered at www.zoobank.org under urn: lsid: zoobank.org:pub: 5AE5C820-C922-492B-83F3-66C957E53453.

Typhoon Identification and Positioning Using the FY-4A AGRI Thermal Infrared Data

This paper addresses typhoon identification and positioning by using the thermal infrared data acquired by the Advanced Geostationary Radiation Imager (AGRI) on the Chinese Fengyun 4A (FY-4A) satellite. First, a training dataset, a validation dataset, and a test dataset of typhoons in the West Pacific Ocean close to China are created from the FY-4A AGRI thermal infrared data. Then, the YOLOX neural network is configured and trained, in which an average precision (AP) of 33.2 is obtained for the test dataset. Finally, with the prior knowledge that the brightness temperature of the typhoon eye is higher than that of its surroundings, the typhoon eyes are located using the morphological image processing method. The results of typhoon eye positioning are generally consistent with the Optimal Path (OP) dataset of tropical cyclones created by the China Meteorology Administration (CMA), and the mean errors in latitude and longitude are 0.0391° and 0.0334°, respectively.

Lebensspuren and müllspuren: Drifting plastic bags alter microtopography of seafloor at full ocean depth (10,000 m, Philippine Trench)

Tracks, trails, burrows, faecal castings and other sedimentary structures made by organisms on the deep-seafloor, known as “Lebensspuren”, form a natural and significant component of the microtopography at the sediment-water interface. These structures are often more conspicuous than the errant organisms responsible for them, particularly at hadal depths (>6000 m). Recent explorations of the deepest places in the oceans have revealed the occurrence of long, often parallel tracks running in unnaturally straight lines along the trench floors, erasing lebensspuren. During a crewed submersible dive to 10,000 m deep in the Philippine Trench (west Pacific Ocean), the source of these features was confirmed to be the result of plastic bags drifting in the near-bottom currents. During the 90 min transect of the trench floor, nine individual bags were observed compared to only one benthic holothurian. Assuming the bags are drifting at similar speeds to the current, these tracks, documented here for the first time, that we have coined “müllspuren” are forming up to 12 times faster than hadal holothurians create lebensspuren. The area affected is also much larger as the tracks laid down by plastic bags often consist of multiple, parallel gouges with smoothed intermediate sediment. The ecological effects of particle perturbation and the erasing of lebensspuren is unknown but is becoming ubiquitous at the deepest points in our oceans.

Zavarzinia marina sp. nov., a novel hydrocarbon-degrading bacterium isolated from deep chlorophyll maximum layer seawater of the West Pacific Ocean and emended description of the genus Zavarzinia.

A Gram-stain-negative, motile, non-spore-forming, strictly aerobic and rod-shaped bacterial strain, Adcm-6AT, was isolated from a seawater sample collected from the deep chlorophyll maximum layer in the West Pacific Ocean. Strain Adcm-6AT grew at 20-37 °C (optimum, 28-32 °C), at pH 6-11 (pH 7) and in the presence of 0-6 % (1-2 %) NaCl (w/v). Phylogenetic analysis based on 16S rRNA gene sequences indicated that it belonged to the genus Zavarzinia and had 97.7 and 96.9 % sequence similarity to Zavarzinia compransoris DSM 1231T and Zavarzinia aquatilis JCM 32263T, respectively. Digital DNA-DNA hybridization and average nucleotide identity values between strain Adcm-6AT and the two type strains were 22.2-22.9 % and 79.7-80.4 %, respectively. The principal fatty acids were C19:0 cyclo ω8c, summed feature 8 (C18:1 ω6c and/or C18:1 ω7c) and C16:0. The predominant respiratory quinone was Q-10. The polar lipids were diphosphatidylglycerol, two phosphatidylethanolamines, two phosphatidyglycerols and an unidentified lipid. The genomic DNA G+C content of strain Adcm-6AT was 67.7 %. Based on phylogenetic analysis and genomic-based relatedness indices, as well as phenotypic and genotypic characteristics, strain Adcm-6AT represents a novel species within the genus Zavarzinia, for which the name Zavarzinia marina sp. nov. is proposed. The type strain is Adcm-6AT (=MCCC M24951T=KCTC 82849T).

Porewater geochemistry indicates methane seepage in the Okinawa Trough and its implications for the carbon cycle of the subtropical West Pacific

The Kuroshio Current, originating from the West Pacific Warm Pool and flowing through the Okinawa Trough, connects the equator and the subtropical West Pacific and plays an important role in the carbon cycle in the West Pacific Ocean. Previous studies have focused on the effects of surface export productivity and bottom redox conditions on the carbon cycle in the late Quaternary. Recent studies have demonstrated that methane seepages are very common in the Okinawa Trough, however, their significance for the carbon cycle remains not well understood. Here, methane seepages and sulfate-driven anaerobic oxidation of methane (SD-AOM) are constrained by the geochemical characteristics of porewater at site CSHC-4 (Length: 1555 cm) derived from the water depth of 934 m on the western continental slope of the Okinawa Trough. Using the △(DIC+ Ca2++ Mg2+)/△SO42− ratio, it is suggested that the sulfate reduction in the upper part of site CSHC-4 is dominated by organoclastic sulfate reduction (OSR), while that between 655 and 1055 cm is gradually dominated by SD-AOM with deepening depth. However, with the depletion of sulfate, the methanogenesis process predominates at the bottom of site CSHC-4. The depth of the sulfate-methane interface (SMI) and the methane diffusive flux of site CSHC-4 is calculated to be ∼1156 cm and ∼ 63 mmol m−2 yr−1, respectively. Near the SMI, the changes in concentrations of Ca2+, Mg2+, Sr2+ and ratios of Mg/Ca and Sr/Ca in the porewater indicate the possibility of the precipitation of authigenic high-Mg calcite in the sediments. In contrast, the increase in the concentration of Ba2+ in porewater below the SMI may imply the dissolution of barite (BaSO4). In addition, redox-sensitive elements in porewater exhibit various geochemical behaviours due to changes in redox conditions caused by SD-AOM. The above SD-AOM processes will affect the reconstruction of surface productivity and redox conditions of bottom water in the Okinawa Trough since the late Quaternary based on biogenic elements (e.g., Ca and Ba) and redox-sensitive elements (e.g., U and Cr), which requires careful evaluation. Therefore, our new findings illustrate the modern methane seepage in the Okinawa Trough and provide a reference for calculating the ancient carbon cycle in the subtropical West Pacific.

Assessment of global habitat suitability and risk of ocean green tides

Green tides, which are widespread problems, are harmful issues that affect the protection of ocean ecosystems and natural resources. Scientific assessment and prevention of the green tides are essential for sustainable planning and the utilization of maritime traffic, tourism, and industry. However, the suitable or risk habitats and their dominant factors of green tides from global perspective are unknown. Here, this study proposed a novel framework to show the habitat suitability and risk of ocean green tides by considering marine environmental factors (i.e., sea surface temperature, sea surface salinity, solar irradiance, chlorophyll-a concentration, and sea surface wind). Through global remote sensing images and marine environmental factor data, this study found that (1) suitable and at-risk green tides areas are located in the north and south temperate zones; (2) marine physical factors are expected to weaken the green tide risk globally and enhance the green tide risk in coastal areas; (3) the green tides in the North Atlantic Ocean and the West Pacific Ocean are dominated by environmental factors and physical factors, respectively; and (4) when reducing carbon to promote sustainability, more potentially suitable green tide areas may appear at high latitudes. The results demonstrate the at-risk location and future trend of green tides, which are helpful for sustainable planning of ocean ecosystems.

Early onset of summer monsoon during the Mystery Interval (17.5–14.5 ka BP) in the East Asian Summer Monsoon area: Evidence from leaf alkane δ2H

Exploring the seasonal atmospheric processes involved with hydroclimate changes of the East Asian Summer Monsoon (EASM) during the Mystery Interval (MI, 17.5–14.5 ka BP) will enhance understanding of the EASM climate system. Here we report on the δ2H values of leaf wax n-alkanes (δ2Halk) in a wetland core retrieved from southern China. These values are relatively negative during the MI, contrasting to positive excursion recorded by stalagmite δ18O in nearby caves during the same period. Considering the overlap of the primary synthesis time of leaf waxes in deciduous woody plants and periods of precipitation δ2H alteration in the EASM (late spring to early summer), we interpret the relatively negative signal of δ2Halk in the wetland core as the early onset of summer rainfall during the MI. The early onset of summer rainfall was likely due to the early northeastward shifting of the Western Pacific subtropical high due to the low land-sea thermogradient between the Qinghai-Tibet Plateau and the West Pacific Ocean.

Insights into community assembly mechanisms, biogeography, and metabolic potential of particle-associated and free-living prokaryotes in tropical oligotrophic surface oceans

Heterotrophic prokaryotes constitute the largest living biomass in the ocean and can be divided into particle-associated (PA) and free-living (FL) fractions. PA and FL prokaryotic communities play critical roles in the biogeochemical cycles of particulate and dissolved organic matter; however, their community assembly processes, biogeographical distribution patterns, and functional properties in oligotrophic surface water remain to be further elucidated. Based on 16S rRNA gene sequencing and shotgun metagenomics, we investigated the assembly mechanisms, biogeography, and functional potential of PA and FL prokaryotes in the surface waters of the West Pacific and Indian Oceans. FL prokaryotic communities were predominantly structured by deterministic processes, whereas their PA counterparts appeared to be shaped by the combined action of deterministic and stochastic processes. PA and FL prokaryotes in the tropical oligotrophic surface ocean exhibit markedly different community structures and functional potentials. Bacterial PA specialists such as Lentimonas, Alteromonas, and Pirellula as well as archaeal PA specialists Marine Group II and Marine Group III were significantly more abundant in PA assemblages, whereas lineages such as Prochlorococcus, SAR11 clade, and Candidatus Actinomarina were significantly more abundant in FL communities. The metabolic potential of the PA community was more abundant in pathways such as polyamine biosynthesis, carbohydrate metabolism, and glycosaminoglycan degradation. In contrast, the FL community was more enriched in functions related to amino acid metabolism, lipid biosynthesis, and aromatic degradation.