Vetiver is one of the valued plants in the aromatic world which has been extensively used in fragrances, aromatherapy, and medicines. The essential oils derived from vetiver root portions are mainly responsible for the organoleptic character of the plant. Vetiver essential oil is composed of diverse structural framework biosynthesized by using three isoprene units or sesquitepene leading to a number of bicyclic, tricyclic and tetracylic structures. Sequiterpenoids contribute major proportion to vetiver (Chrysopogon zizanioides) roots. However, the terpene synthases and their role in sesquiterpene biosynthesis in plant have not yet been studied. On the basis of volatile composition, two distinct stable vetiver genotypes viz., ‘CIM-Vridhi’ and ‘CIMAP-Khusinolika’ have been identified in ‘CSIR-CIMAP’ in recent years. Such a unique chemical difference is attributed to the array of structural diversity in sesquiterpenes and their derivatives. The root transcriptome of the two contrasting genotypes ‘CIM-Vridhi’ and ‘CIMAP-Khusinolika’ was carried out and three full length terpene synthase (TPS) genes were analyzed. These synthase genes, CZTPS1, CZTPS2, and CZTPS3 produce multiple sesquiterpenoids and were functionally characterized. In addition, the gene expression studies leading to metabolite biosynthesis in these genotypes were further confirmed by compound isolation and NMR based structural characterization of compounds from each genotypes. A bicyclic cadinane called khusinol identified as unique identifier in ‘CIMAP-Khusinolika’ while khusimol, a tricyclic zizaene dominates the ‘CIM-Vridhi’ oil composition. In conclusion, characterization of unique markers in each genotypes has been well supported by their transcriptomic data. Thus, present study can be utilized to investigate the vetiver terpenoid metabolism and its structure–odor correlations for the production of more potent odor threshold oriented chemicals from this plant.
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