With the increasing severity of global environmental issues, natural reserves have become crucial areas for maintaining biodiversity and protecting natural ecosystems. The ecological status of landscape vegetation and the characteristics of cellular structures within these reserves have become focal points of research. However, traditional evaluation methods have limitations when dealing with the complex ecosystems of natural reserves, making it difficult to assess the relationship comprehensively and accurately between vegetation ecology and cellular structures. Therefore, this paper proposes an analysis of landscape vegetation ecology and cellular structure in natural reserves based on an improved Analytic Hierarchy Process (AHP). By incorporating fuzzy set theory and expert scoring mechanisms, the evaluation process is enhanced in terms of objectivity and precision. An evaluation index system for landscape vegetation ecology and cellular structure in natural reserves is constructed, covering aspects such as vegetation species richness, community structural complexity, and ecological functional stability. This systematic approach reflects the ecological status of vegetation and cellular structure characteristics, providing scientific support for targeted protection and management measures.