AbstractBiological soil crusts (biocrusts) have crucial ecological functions in dryland ecosystems, yet understanding the variations in soil microbial biomass within biocrusts across diverse ecosystems, climates and soil conditions remains limited. This knowledge gap constrains our understanding of how microbial communities within biocrusts regulate terrestrial carbon and nitrogen cycling. Hence, we conducted a meta‐analysis using 255 paired observations from 42 study sites across the northern temperate ecosystem. The analysis revealed that biocrusts harbour significantly higher soil microbial biomass carbon and nitrogen (SMBC and SMBN, respectively) levels than bare (non‐biocrust) soil across all habitat types. Notably, deeper soil layers (5–10 and >10 cm) accumulated less SMBC and SMBN than biocrust and biocrust–5‐cm soil, revealing that biocrusts influence shallow soil environments. Ecosystem type, soil texture, depth and season emerged as key factors influencing the distribution of SMBC within biocrusts. Of particular interest, lichen biocrusts accumulated the most SMBC compared with other biocrust types. Furthermore, the difference in SMBC between biocrust and non‐biocrust soils was more pronounced in oligotrophic habitats (e.g., desert, grassland, sand and sandy loam soils) than in eutrophic habitats (e.g., forest and loam soils). Random forest analysis confirmed that soil variables affected SMBC accumulation in biocrusts more than climatic factors. Soil organic carbon (SOC), as the primary source of SMBC, could be the most important determinant. Moreover, the disparity between non‐biocrust SMBC and biocrust SMBC increased with increasing mean annual temperature (MAT) or decreasing altitude. These insights underscore the substantial contribution of lichen biocrusts to SMBC and emphasize the need to incorporate this knowledge into regional models for predicting the effects of climate change on soil carbon budgets within biocrust microbiomes in temperate ecosystems of the Northern Hemisphere.