Ruminants play an important role in global food security and nutrition. The rumen microbial community provides ruminants with a unique ability to convert human indigestible plant matter, into high quality edible protein. However, enteric CH4 produced in the rumen is both a potent GHG and a metabolizable energy loss for ruminants. As the rumen microbiome constitutes 15-40% of the inter-animal variation in enteric CH4 emissions, understanding the microbiological mechanisms underpinning ruminal methanogenesis and its interaction with the host animal, is crucial for developing CH4 mitigation strategies. Variation in the relative abundance of different microbial species has been observed in cattle with contrasting residual CH4 emission and CH4 yield with up to 20% of the variation in inter-animal CH4 emissions attributable to the presence of a small number of microbial species. The demonstration of ruminotypes associated with high or low CH4 emissions suggests that interactions within complex microbial consortia and with their host are a major source of variation in CH4 emissions. Consequently, microbiome-assisted genomic approaches are being developed to select low CH4 emitting cattle, with breeding values for enteric CH4 being included as part of national breeding programmes. Generating rumen microbiome data for use in selection programs is expensive, therefore, identifying microbial biomarkers in milk or plasma to develop predictive models which include microbial predictors in equations based on animal related data, is required. A better understanding of the rumen microbiome has also aided the development and refinements of anti-methanogenic feed additives. However, these strategies, which increase the amount of reducing equivalents in the rumen ecosystem, do not generally result in an enrichment of propionate or an improvement in animal performance. Current research aims to provide alternative sinks to reducing equivalents and to stimulate activity of commensal microbes or the supplementation of direct fed microbials to capture lost energy. Furthering our knowledge of the rumen microbiome and its interaction with the host, will aid in the development of CH4 mitigation strategies for ruminant livestock.
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