Species Diversity Of Assemblages Research Articles

Phenology and ecological role of aerobic anoxygenic phototrophs in freshwaters

BackgroundAerobic anoxygenic phototrophic (AAP) bacteria are heterotrophic bacteria that supply their metabolism with light energy harvested by bacteriochlorophyll-a-containing reaction centers. Despite their substantial contribution to bacterial biomass, microbial food webs, and carbon cycle, their phenology in freshwater lakes remains unknown. Hence, we investigated seasonal variations of AAP abundance and community composition biweekly across 3 years in a temperate, meso-oligotrophic freshwater lake.ResultsAAP bacteria displayed a clear seasonal trend with a spring maximum following the bloom of phytoplankton and a secondary maximum in autumn. As the AAP bacteria represent a highly diverse assemblage of species, we followed their seasonal succession using the amplicon sequencing of the pufM marker gene. To enhance the accuracy of the taxonomic assignment, we developed new pufM primers that generate longer amplicons and compiled the currently largest database of pufM genes, comprising 3633 reference sequences spanning all phyla known to contain AAP species. With this novel resource, we demonstrated that the majority of the species appeared during specific phases of the seasonal cycle, with less than 2% of AAP species detected during the whole year. AAP community presented an indigenous freshwater nature characterized by high resilience and heterogenic adaptations to varying conditions of the freshwater environment.ConclusionsOur findings highlight the substantial contribution of AAP bacteria to the carbon flow and ecological dynamics of lakes and unveil a recurrent and dynamic seasonal succession of the AAP community. By integrating this information with the indicator of primary production (Chlorophyll-a) and existing ecological models, we show that AAP bacteria play a pivotal role in the recycling of dissolved organic matter released during spring phytoplankton bloom. We suggest a potential role of AAP bacteria within the context of the PEG model and their consideration in further ecological models.

Effect of expanding farmlands with domestication of animals in the vicinity of disturbed swamps and built-up farmland ponds on population dispersion and decline of locally adapted Mansonia vectors (Diptera: Culicidae).

The adaptive processes and resilience of Mansonia vectors responsible for bioindicators can change in response to climate, land use, and environmental changes. This study evaluated the effects of expanding farmlands with the domestication of animals in the vicinity of either disturbed swamps or built-up farmland ponds on the population dispersion and decline of locally adapted Mansonia faunas as a result of expanding farmlands in Thailand. Based on environmental surveys, four different geographically defined study sites were selected: I - the expanding farmlands with domestication of livestock and pet animals in the vicinity of low-lying swamp with habitat fragmentation and aquatic vegetation; II - the expanding farmlands with domestication of pet animals in the vicinity of elevated swamp with habitat destruction and aquatic vegetation; III - the expanding farmlands with domestication of livestock and pet animals in the vicinity of low-lying farmland ponds with restoration and aquatic vegetation; and IV - the expanding farmlands with domestication of pet animals in the vicinity of elevated farmland ponds with restoration and aquatic vegetation. Human landing catch collection method was used to periodically assess the species composition and abundance of Mansonia vectors. Aggregated distributions and seasonal abundances of Mansonia faunas (Mansonia uniformis, Mansonia indiana, Mansonia annulifera, Mansonia annulata, Mansonia bonneae, and Mansonia dives) with variable proportions were observed at all the study sites. A decline in the population of Mansonia faunas, except for Ma. uniformis, was observed at study sites I and II. The anticipated effects of expanding farmlands affected the population dispersion and decline of locally adapted Mansonia faunas, thus representing a diverse assemblage of Mansonia species with different adaptations, ecological tolerances, and host exploitation strategies in life. These effects depended either on the function of disturbed swamps or on the development of farmland ponds, whether they provided a wide range of freshwater habitats, or on the domestication of animals, whether they provided animal blood meal sources.

Light at the end of the tunnel: Innovative opportunities for saving tropical biodiversity.

The expansion of roads into wilderness areas and biodiversity hotspots in the Global South seems inevitable and is predicted to bring about significant biodiversity loss. Even so, existing widespread strategies aiming to mitigate the direct and indirect impacts of roads on the environment have been of limited effectiveness. These tactics, including construction of fencing, wildlife crossings on paved roads, and establishment of protected areas along the roads, are unlikely to be sufficient for protecting diverse species assemblages from roadkill, habitat fragmentation, and anthropogenic activity in tropics. This indicates the need for integration of more ambitious approaches into the conservation toolkit, such as the constructing tunnels, covered ways, and elevated roads. Although these tools could significantly support conservation efforts to save tropical biodiversity, to date, they are rarely considered. Here, we discuss factors which determine the need for application of these approaches in the Global South. We highlight the often-overlooked long-term benefits associated with the application of the proposed tools. We also discuss the potential challenges and risks, and the ways to minimise them. Hopefully this article will encourage practitioners to integrate these strategies into conservation toolkits and allow policy-makers and investors to make informed decisions on sustainable road infrastructure development in the Global South.

Environmental DNA reveals patterns of biological invasion in an inland sea.

Non-native species have the potential to cause ecological and economic harm to coastal and estuarine ecosystems. Understanding which habitat types are most vulnerable to biological invasions, where invasions originate, and the vectors by which they arrive can help direct limited resources to prevent or mitigate ecological and socio-economic harm. Information about the occurrence of non-native species can help guide interventions at all stages of invasion, from first introduction, to naturalization and invasion. However, monitoring at relevant scales requires considerable investment of time, resources, and taxonomic expertise. Environmental DNA (eDNA) metabarcoding methods sample coastal ecosystems at broad spatial and temporal scales to augment established monitoring methods. We use COI mtDNA eDNA sampling to survey a diverse assemblage of species across distinct habitats in the Salish Sea in Washington State, USA, and classify each as non-native, native, or indeterminate in origin. The non-native species detected include both well-documented invaders and species not previously reported within the Salish Sea. We find a non-native assemblage dominated by shellfish and algae with native ranges in the temperate western Pacific, and find more-retentive estuarine habitats to be invaded at far higher levels than better-flushed rocky shores. Furthermore, we find an increase in invasion level with higher water temperatures in spring and summer across habitat types. This analysis contributes to a growing understanding of the biotic and abiotic factors that influence invasion level, and underscores the utility of eDNA surveys to monitor biological invasions and to better understand the factors that drive these invasions.

The genus Rachicladosporium: introducing new species from sooty mould communities and excluding cold adapted species

The fungal genus Rachicladosporium (Cladosporiales, Cladosporiaceae), typified by cladosporium-like Rachicladosporium luculiae, includes a morphologically diverse assemblage of species. The species of this genus were reported from different substrates, habitats and environments, including plant leaves and needles, twig, black mould on baobab trees, rocks and insects. In this study, four new Rachicladosporium species (R. europaeum, R. ignacyi, R. kajetanii, R. silesianum) isolated from sooty mould communities covering leaves and needles of trees and shrubs in Poland are described. The new species are delineated based on morphological characteristics and molecular phylogenetic analyses using concatenated ITS, LSU, and rpb2 sequences. All newly described species are nested in the main Rachicladosporium lineage (centred around the type species), which contains species that are able to grow at 25 °C. By contrast, four cold adapted, endolithic species known from Antarctica (R. antarcticum, R. aridum, R. mcmurdoi) and Italian Alps (R. monterosanum) form distant phylogenetic lineage and do not grow at this temperature. Therefore, they are accommodated in the new genus Cryoendolithus, typified by Cryoendolithus mcmurdoi.

When Do Traits Tell More Than Species about a Metacommunity? A Synthesis across Ecosystems and Scales.

AbstractLinking species traits with the variation in species assemblages across habitats has often proved useful for developing a more mechanistic understanding of species distributions in metacommunities. However, summarizing the rich tapestry of a species in all of its nuance with a few key ecological traits can also lead to an abstraction that provides less predictability than when using taxonomy alone. As a further complication, taxonomic and functional diversities can be inequitably compared, either by integrating taxonomic-level information into the calculation of how functional aspects of communities vary or by detecting spurious trait-environment relationships. To remedy this, we here synthesize analyses of 80 datasets on different taxa, ecosystems, and spatial scales that include information on abundance or presence/absence of species across sites with variable environmental conditions and the species' traits. By developing analyses that treat functional and taxonomic diversity equitably, we ask when functional diversity helps to explain metacommunity structure. We found that patterns of functional diversity explained metacommunity structure and response to environmental variation in only 25% of the datasets using a multitrait approach but up to 59% using a single-trait approach. Nevertheless, an average of only 19% (interquartile range = 0%-29%) of the traits showed a significant signal across environmental gradients. Species-level traits, as typically collected and analyzed through functional diversity patterns, often do not bring predictive advantages over what the taxonomic information already holds. While our assessment of a limited advantage of using traits to explain variation in species assemblages was largely true across ecosystems, traits played a more useful role in explaining variation when many traits were used and when trait constructs were more related to species' status, life history, and mobility. We propose future research directions to make trait-based approaches and data more helpful for inference in metacommunity ecology.

Complex patch geometry promotes species coexistence through a reverse competition-colonization trade-off.

Explaining the maintenance of diverse species assemblages is a central goal of ecology and conservation. Recent coexistence mechanisms highlight the role of dispersal as a source of the differences that allow similar species to coexist. Here, we propose a new mechanism for species coexistence that is based on dispersal differences, and on the geometry of the habitat patch. In a finite habitat patch with complex boundaries, species with different dispersal abilities will arrange themselves in stable, concentric patterns of dominance. Species with superior competitive and dispersal abilities will dominate the interior of the patch, with inferior species at the periphery. We demonstrate and explain the mechanism on a simple one-dimensional domain, and then on two-dimensional habitat patches with realistic geometries. Finally, we use metrics from landscape ecology to demonstrate that habitat patches with more complex geometries can more easily support coexistence. The factors that underpin this new coexistence mechanism-different dispersal abilities and habitat patches with complex geometries-are common to many marine and terrestrial ecosystems, and it is therefore possible that the mechanism is a common factor supporting diverse species assemblages.

Microplastics in river sediment: Chronic exposure of the amphipod Gammarus fossarum to polyethylene terephthalate in a microcosm

Microplastics constitute a form of particulate matter in aquatic environments, where they are a widespread pollutant. The broad range of particle sizes facilitates interactions with diverse species assemblages. Exposure to microplastics can negatively impact organisms, but similar effects also arise from exposure to naturally occurring particles, such as increased oxidative stress. It therefore remains uncertain, what effects are specific to microplastic particles, and how these effects manifest as a consequence of chronic exposure. Here we show in microcosm experiments that long-term exposure (111 days) to irregularly shaped polyethylene terephthalate (PET) fragments (10–400 µm) added to riverine sediments did not negatively impact the amphipod Gammarus fossarum’s group size, and oxygen consumption, and minimally affected proteome composition. We found that these results were consistent for male and female specimens when exposed to an environmentally relevant concentration (0.004% of sediment dry weight; dw) and an environmentally less realistic one (4% dw). In female specimens' whole proteomes, we identified two highly differentially abundant proteins, which have been associated with an organism's response to xenobiotics. We conclude that in this sentinel species exposure to PET microplastic fragments mixed into the sediment does not elicit significant stress, even at concentrations exceeding current exposure levels in the environment.

An Inexpensive System to Investigate the Daily Rhythms of Insects.

Insects' daily rhythms occur in response to their surrounding environment. Recognizing the daily rhythms of pathogen vectors can be helpful in developing effective, safe, and sustainable management strategies to control vector insects and reduce the spread of pathogens. However, studying the daily rhythm of insects often requires costly or labor-intensive trapping, and few tools are available to quantify daily rhythms in the field. We developed a simple collection system to study the flight activity of mosquitoes and biting midges using a contained, programmable, rotating, automatic pet feeder. A diverse assemblage of nuisance and vector species were collected with our system, including mosquitoes of the genera Aedes, Anopheles, Culex, and Deinocerites and biting midges (Ceratopogonidae) such as the coastal pest Culicoides furens. Surprisingly, mosquitoes and biting midges were less active during crepuscular periods (1800-2100h; 0600-0900h) than during dark periods (2100h-2400h; 0300h-0600h). A number of urban and agricultural pest insects were captured, including Coleoptera, Hymenoptera, Isoptera and Lepidoptera. This study shows that relatively inexpensive products can be adapted to study the daily rhythms of flying vectors and nuisance arthropods, with implications for vector-borne disease transmission and control. The collection system could also be used with flight intercept or pitfall traps, permitting study of the circadian activity patterns of a diverse array of arthropods.

Who lives in a pear tree under the sea? A first look at tree reefs as a complex natural biodegradable structure to enhance biodiversity in marine systems

Hard substrates play an important role in global marine systems as settlement surface for sessile reef-forming species such as corals, seaweeds, and shellfish. In soft-sediment systems, natural hard substrates such as stones, bedrock and driftwood are essential as they support diverse assemblages of reef-associated species. However, availability of these hard substrates has been declining in many estuaries and shallow seas worldwide due to human impacts. This is also the case in the Dutch Wadden Sea, where natural hard substrates have gradually disappeared due to burial by sand and/or active removal by humans. In addition, driftwood that was historically imported from rivers has been nullified by upstream logging and coastal damming of estuaries. To investigate the historic ecological role of wood presence in the Wadden Sea as settlement substrate and fish habitat, we constructed three meter high artificial reefs made of felled pear trees. Results demonstrate that these reefs rapidly developed into hotspots of biodiversity. Within six months, the tree-reefs were colonized by sessile hard substrate associated species, with a clear vertical zonation of the settled species. Macroalgae and barnacles were more abundant on the lower parts of the reef, while bryozoans were more dominant on the upper branches. In addition, six fish species were observed on the reefs, while only two species were caught on sandy control sites. Moreover, the abundance of fish on the reefs was five times higher. Individuals of the most commonly caught species, the five-bearded rockling Ciliata mustela, were also larger on the reef. These patterns also hold true for common prawn, Palaemon serratus, which were also larger and ten times more numerous on the reefs. Present findings indicate that the reintroduction of tree-reefs as biodegradable, structurally complex hard substrates can increase local marine biodiversity in soft-sediment systems within relatively short time scales.

Floristic Survey of Deedwana Tehsil, District Nagaur, Rajasthan

Abstract: The present research paper presents a comprehensive floristic study of Deedwana Tehsil, District Nagaur, Rajasthan, aimed at documenting the plant diversity and understanding its ecological significance. The study involved extensive field surveys, specimen collections, and interviews with local experts to identify and classify the plant species within the region. The results revealed a diverse and unique assemblage of plant species in Deedwana Tehsil, representing various vegetation types and habitats. The enumeration of identified plant species showcased a rich floral diversity, including both native and exotic species. A total of 331 species of angiospermic plants belonging to 218 genera and 65 families were recorded including four series of natural vegetation in Deedwana tehsil: 1. Acacia nilotica-Maytenus emarginata-Balanites aegyptiaca series 2. Prosopis cineraria-Crotalaria burhia-Leptadaenia pyrotechnica series. 3. Prosopis cineraria- Capparis decidua-Tephrosia purpuria series and 4. Suaeda fruticosa-Cressa cretica–Heliotropium curassavicum series. (Quereishi, 2018). The study also provide information about the traditional uses of plants by local communities, providing insights into their cultural significance and medicinal applications. Traditional knowledge holders and local healers shared valuable information about medicinal plant practices, adding to the understanding of the region's traditional healthcare systems. The study also analyzed the major threats faced by the flora of Deedwana Tehsil, such as habitat loss, overgrazing, climate change, and unsustainable resource extraction. These findings highlighted the urgent need for conservation and sustainable management initiatives to protect the region's botanical wealth

Shoreline master programs: A hindrance or a help to kelp conservation in Puget Sound?

The waters of Puget Sound are home to one of the most diverse assemblages of kelp species in the world, providing numerous ecosystem services. However, documented loss of bull kelp (Nereocystis luekeana) forests in South and Central Puget Sound and observed declines throughout Puget Sound, pose a threat to marine ecosystems dependent on kelp forests for habitat and primary production, and jeopardize economic activities reliant on kelp-based resources. Although the recently released Kelp Conservation and Recovery Plan highlights the need for action, local environmental regulations may complicate implementing restoration projects and may not adequately protect kelp. We used content analysis to examine 45 local Shoreline Master Programs in jurisdictions along Puget Sound to identify kelp protection and restoration actions, then compared local kelp protection and restoration potential to the best available science of linear extent of understory and canopy kelp in each county. Our assessment revealed generally low levels of both protection of kelp and support for kelp restoration across all Shoreline Master Programs. These results may reflect a bias toward freshwater restoration stemming from watershed restoration efforts in the late 1990 s and early 2000 s. Although support for kelp restoration is largely absent from current Shoreline Master Programs, recent legislative activity has paved the way for policy changes that reflect the emerging scientific consensus that nearshore kelp habitats in Puget Sound are vital for salmon, rockfish and other important species.

A diverse assemblage of Ptychodus species (Elasmobranchii: Ptychodontidae) from the Upper Cretaceous of Ukraine, with comments on possible diversification drivers during the Cenomanian

New isolated teeth from the Upper Cretaceous of Ukraine and belonging to the extinct durophagous shark Ptychodus are described here. The taxonomic identification of the examined material reveals a quite diverse Cenomanian shark fauna which comprised both cuspidate and un-cuspidate species of Ptychodus from the coastal areas at the north-western margin of the Ukrainian Massif. In addition, P. latissimus from the Turonian of Ukraine is reported here for the first time. The revision of the Ukrainian record of Ptychodus revealed that most specimens described here are the oldest so far known from this part of the European Peri-Tethys. Moreover, the present study highlights the co-occurrence of cuspidate and un-cuspidate Ptychodus and a variety of shelled macroinvertebrates, which inhabited coastal and offshore areas of the European epicontinental seas during the Late Cretaceous. The availability of different prey items is proposed here as one of the possible drivers, in addition to abiotic environmental factors, for the diversification of shark tooth morphologies, and possible trophic partitioning between cuspidate and un-cuspidate species of the genus Ptychodus.

Phenotypic and genomic dissection of colour pattern variation in a reef fish radiation.

Coral reefs rank among the most diverse species assemblages on Earth. A particularly striking aspect of coral reef communities is the variety of colour patterns displayed by reef fishes. Colour pattern is known to play a central role in the ecology and evolution of reef fishes through, for example, signalling or camouflage. Nevertheless, colour pattern is a complex trait in reef fishes-actually a collection of traits-that is difficult to analyse in a quantitative and standardized way. This is the challenge that we address in this study using the hamlets (Hypoplectrus spp., Serranidae) as a model system. Our approach involves a custom underwater camera system to take orientation- and size-standardized photographs in situ, colour correction, alignment of the fish images with a combination of landmarks and Bézier curves, and principal component analysis on the colour value of each pixel of each aligned fish. This approach identifies the major colour pattern elements that contribute to phenotypic variation in the group. Furthermore, we complement the image analysis with whole-genome sequencing to run a multivariate genome-wide association study for colour pattern variation. This second layer of analysis reveals sharp association peaks along the hamlet genome for each colour pattern element and allows to characterize the phenotypic effect of the single nucleotide polymorphisms that are most strongly associated with colour pattern variation at each association peak. Our results suggest that the diversity of colour patterns displayed by the hamlets is generated by a modular genomic and phenotypic architecture.

No Observed Effects of Subsea Renewable Energy Infrastructure on Benthic Environments

For the tidal energy industry to move forward to commercialisation, understanding the interaction between the environment and tidal energy converters (TEC) is essential. The benthic environment may be particularly vulnerable to development by changing the existing physical and ecological characteristics. To assess measurable changes of the infrastructural and operation activity of the Deep Green subsea TEC known as the kite, developed by Minesto, benthic surveys were carried out in the Narrows, Strangford Lough, Northern Ireland. At the Minesto site and two other locations, scientific divers carried out circular cardinal-direction benthic camera surveys prior to and after five years of operation. A diverse assemblage of sessile, vagile and mobile species associated with substrate types were identified. No significant changes at any of the sites were recorded in the abundance of species, substrate type or species diversity over the five-year period. The results show that no impact on benthic communities was detected as a result of the operation and deployment of the infrastructure associated with the technology.

Phylogenetic and functional trait-based community assembly within Pacific Cyrtandra (Gesneriaceae): Evidence for clustering at multiple spatial scales.

Tropical rainforest communities are often characterized by a small number of species-rich genera that contribute disproportionately to the alpha diversity in these habitats. In the Pacific Basin, there are nearly 200 species of Cyrtandra, most of which are white-flowered woody shrubs that are single-island endemics. Within these island communities, multiple Cyrtandra species are commonly observed to occur sympatrically in wet forest understories, forming swarms of what appear to be ecologically similar taxa. The aim of this study was to determine whether species of these plants are randomly assembled with respect to phylogenetic relatedness and traits that are ecologically relevant. I examined assembly patterns across three Pacific archipelagoes using a combination of 10 functional traits and a well-resolved phylogeny comprising 34 species of Cyrtandra. Coexisting species were found to be more closely related and more phenotypically similar than would be expected by chance. This pattern was observed at both regional (island) and local (site) spatial scales. The retention of phylogenetic signal in floral traits and the strong influence of these traits on the observed degree of phylogenetic clustering may indicate that generalist insect pollinators act as a biotic filter on oceanic islands, driving selection for similar floral morphology among closely related species of Pacific Cyrtandra. Phylogenetic signal was also detected in leaf size, which contributed to niche clustering at both spatial scales. Coupled with a propensity for long-distance dispersal, and the restricted distribution of Cyrtandra to rainforest understories, this finding suggests that environmental filtering along this trait axis may be more important than dispersal limitation in determining species assemblages. This study supports the theory that plant species are not randomly assembled, and instead, that niche-based processes structure biodiversity at regional and local spatial scales in diverse congeneric species assemblages.

Ecological consequences of shifting habitat mosaics within and across years in an intermittent stream

Abstract Intermittent streams that cease to flow during dry periods represent more than half of the global river network, and are particularly common in arid and semi‐arid regions. They are characterised by high spatial and temporal variability in aquatic habitat, forming a shifting habitat mosaic that supports diverse assemblages of native and endemic species. Climate projections for much of the world predict greater variation in precipitation and increasing drought severity, suggesting a need to better understand species' responses to habitat variability within intermittent stream ecosystems. Here we explored changes in the distribution and abundance of aquatic vertebrates in response to a wide range of annual hydrologic conditions within a Mediterranean‐climate intermittent stream in California. We conducted wetted habitat and vertebrate abundance surveys during the dry season for 7 years, spanning both extreme wet and extreme dry annual precipitation conditions, and characterised the variation in the size, persistence, and spatial configuration of wetted habitats in relation to the observed abundance and composition of fishes, amphibians, and aquatic reptiles. We characterised the habitat mosaic using a k‐means clustering approach, and identified three habitat types with distinct size, persistence, and connectivity distributions. We found that some wetted habitat units persisted across all years, regardless of antecedent precipitation, whereas others dried in all but the wettest years. We determined that persistent pools, a subset of wetted habitats present in the stream, supported diverse assemblages of native species even during extreme dry conditions, while transient pools acted as important habitat for particular species and life stages, including a young‐of‐year minnow species. Linear mixed models indicated that species' abundances were influenced by habitat quantity, quality, and connectivity. Our study ‐ considers intermittent streams as shifting habitat mosaics and uses multi‐year surveys to understand the ecological consequences of habitat variability within and across years to advance our understanding of intermittent stream ecology and the implications of climate change for spatial and temporal patterns of refuge habitat.

Disentangling the determinants of symbiotic species richness in native and invasive gammarids (Crustacea, Amphipoda) of the Baltic region

Dispersal of alien species is a global problem threatening native biodiversity. Co-introduction of non-native parasites and pathogens adds to the severity of this threat, but this indirect impact has received less attention. To shed light on the key factors determining the richness of microorganisms in native and invasive host species, we compared symbiotic (parasitic and epibiotic) communities of gammarids across different habitats and localities along the Baltic coast of Poland. Seven gammarid species, two native and five invasive, were sampled from 16 freshwater and brackish localities. Sixty symbiotic species of microorganisms of nine phyla were identified. This taxonomically diverse species assemblage of symbionts allowed us to assess the effect of host translocation and regional ecological determinants driving assembly richness in the gammarid hosts. Our results revealed that (i) the current assemblages of symbionts of gammarid hosts in the Baltic region are formed by native and co-introduced species; (ii) species richness of the symbiotic community was higher in the native Gammarus pulex than in the invasive hosts, probably reflecting a process of species loss by invasive gammarids in the new area and the distinct habitat conditions occupied by G. pulex and invasive hosts; (iii) both host species and locality were key drivers shaping assembly composition of symbionts, whereas habitat condition (freshwater versus brackish) was a stronger determinant of communities than geographic distance; (iv) the dispersion patterns of the individual species richness of symbiotic communities were best described by Poisson distributions; in the case of an invasive host, the dispersion of the rich species diversity may switch to a right-skewed negative binomial distribution, suggesting a host-mediated regulation process. We believe this is the first analysis of the symbiotic species richness in native and invasive gammarid hosts in European waters based on original field data and a broad range of taxonomic groups including Microsporidia, Choanozoa, Ciliophora, Apicomplexa, Platyhelminthes, Nematoda, Nematomorha, Acanthocephala and Rotifera, to document the patterns of species composition and distribution.

Six years of demography data for 11 reef coral species.

Scleractinian corals are colonial animals with a range of life-history strategies, making up diverse species assemblages that define coral reefs. We tagged and tracked ~30 colonies from each of 11 species during seven trips spanning 6 years (2009-2015) to measure their vital rates and competitive interactions on the reef crest at Trimodal Reef, Lizard Island, Australia. Pairs of species were chosen from five growth forms in which one species of the pair was locally rare (R) and the other common (C). The sampled growth forms were massive (Goniastrea pectinata [R] and G. retiformis [C]), digitate (Acropora humilis [R] and A. cf. digitifera [C]), corymbose (A. millepora [R] and A. nasuta [C]), tabular (A. cytherea [R] and A. hyacinthus [C]) and arborescent (A. robusta [R] and A. intermedia [C]). An extra corymbose species with intermediate abundance, A. spathulata was included when it became apparent that A. millepora was too rare on the reef crest, making the 11 species in total. The tagged colonies were visited each year in the weeks prior to spawning. During visits, two or more observers each took two or three photographs of each tagged colony from directly above and on the horizontal plane with a scale plate to track planar area. Dead or missing colonies were recorded and new colonies tagged to maintain ~30 colonies per species throughout the 6 years of the study. In addition to tracking tagged corals, 30 fragments were collected from neighboring untagged colonies of each species for counting numbers of eggs per polyp (fecundity); and fragments of untagged colonies were brought into the laboratory where spawned eggs were collected for biomass and energy measurements. We also conducted surveys at the study site to generate size structure data for each species in several of the years. Each tagged colony photograph was digitized by at least two people. Therefore, we could examine sources of error in planar area for both photographers and outliners. Competitive interactions were recorded for a subset of species by measuring the margins of tagged colony outlines interacting with neighboring corals. The study was abruptly ended by Tropical Cyclone Nathan (Category 4) that killed all but nine of the more than 300 tagged colonies in early 2015. Nonetheless, these data will be of use to other researchers interested in coral demography and coexistence, functional ecology, and parametrizing population, community, and ecosystem models. The data set is not copyright restricted, and users should cite this paper when using the data.

Ghost rodents: Albinism in Australian rodent species

While almost half of all mammal species are rodents, records of albinism in free-ranging rodents are very rare. Australia has a large and diverse assemblage of native rodent species, but there are no records of free-ranging albino rodents in the published literature. In this study, we aim to improve our understanding of the occurrence of albinism in Australian rodent species by collating contemporary and historic records of this condition and providing an estimate of its frequency. We found 23 records of albinism (i.e., a complete loss of pigmentation), representing eight species, in free-ranging rodents native to Australia, with the frequency of albinism being generally <0.1%. Our findings bring the total number of rodent species in which albinism has been recorded globally to 76. While native Australian species represent only 7.8% of the world's murid rodent diversity, they now account for 42.1% of murid rodent species known to exhibit albinism. We also identified multiple concurrent albino records from a small island population of rakali (Hydromys chrysogaster) and discuss the factors that may contribute to the relatively high frequency (2%) of the condition on this island. We suggest that the small number of native albino rodents recorded in mainland Australia over the last 100 years means that traits associated with the condition are likely deleterious within populations and are thus selected against.