Rich Diversity Research Articles

Translanguaging and Decolonisation in South African Higher Education: Embracing Multilingual Pedagogies

Translanguaging, a practice that recognises and utilizes multilingual students’ linguistic repertoires has emerged as a crucial approach in challenging traditional language policies, particularly in the South African educational landscape.Despite its embrace, a colonial stance still persists in teaching practices. Through a critical analysis of teaching materials used in an academic literacy course, this paper explores how translanguaging is currently being used in teaching and learning. Findings reveal a tension in the sense that even though students’ language practices are acknowledged, the materials still maintain a dominant position for English. This highlights the need to move beyond a simplistic view of multilingualism towards a more holistic embrace of translanguaging.Set against this background, this research argues that translanguaging can bridge the abyssal divide created by colonialism. It emphasizes the unifying potential of translanguaging, fostering an educational landscape that celebrates South Africa's rich linguistic diversity and cultural heritage. Ultimately, the study calls upon educators to move beyond the limitations of standardized languages and fully embrace translanguaging as a transformative force for decolonization.At the end, the paper calls for further research.

Plasma photonic crystal ‘kaleidoscope’ with flexible control of topology and electromagnetism

Continuous development of photonic crystals (PCs) over the last 30 years has carved out many new scientific frontiers. However, creating tunable PCs that enable flexible control of geometric configurations remains a challenge. Here we present a scheme to produce a tunable plasma photonic crystal (PPC) ‘kaleidoscope’ with rich diversity of structural configurations in dielectric barrier discharge. Multi-freedom control of the PPCs, including the symmetry, dielectric constant, crystal orientation, lattice constant, topological state, and structures of scattering elements, has been realized. Four types of lattice reconfigurations are demonstrated, including transitions from periodic to periodic, disordered to ordered, non-topological to topological, and striped to honeycomb Moiré lattices. Furthermore, alterations in photonic band structures corresponding to the reconstruction of various PPCs have been investigated. Our system presents a promising platform for generating a PPC ‘kaleidoscope’, offering benefits such as reduced equipment requirements, low cost, rapid response, and enhanced flexibility. This development opens up new opportunities for both fundamental and applied research.Graphical

A Multimodal Educational Boot Camp for Training Fellows in Pediatric Extracorporeal Membrane Oxygenation (ECMO).

Pediatric extracorporeal membrane oxygenation (ECMO) management presents unique challenges in acute care settings, requiring specialized expertise to manage critically ill children. Medical and surgical fellows often manage these patients, but prior residency training rarely provides sufficient ECMO exposure. We developed and evaluated a multimodal pediatric ECMO boot camp for new fellows. This boot camp was implemented during 5-hour sessions in August 2021, August 2022, and August 2023. The curriculum included a 45-minute introductory didactics session, 30-minute hands-on circuit demonstration, and four 30-minute small-group activity stations. To assess knowledge acquisition, pre- and posttests were administered; participants also completed a post-boot camp survey to evaluate their confidence and provide feedback. Forty-nine participants completed the boot camp, including 18 critical care, four cardiology, 11 pediatric surgery, 12 cardiothoracic surgery, and four pediatric emergency medicine fellows. Pre- and posttests demonstrated significant improvement in knowledge of ECMO circuit components and pressures (56% vs. 76%, p < .001). All of our participants agreed or strongly agreed that participating in the boot camp increased their confidence in troubleshooting ECMO emergencies. The inclusion of fellows from various clinical disciplines, offering a rich diversity of perspectives, was particularly valued by participants. Our results demonstrate the feasibility and effectiveness of establishing a pediatric ECMO boot camp to train new surgical and medical fellows. The curriculum not only improved ECMO knowledge but also boosted learners' confidence in managing ECMO-related challenges.

Elucidation of Medusozoan (Jellyfish) Venom Constituent Activities Using Constellation Pharmacology.

Within the phylum Cnidaria, sea anemones (class Anthozoa) express a rich diversity of ion-channel peptide modulators with biomedical applications, but corollary discoveries from jellyfish (subphylum Medusozoa) are lacking. To bridge this gap, bioactivities of previously unexplored proteinaceous and small molecular weight (~15 kDa to 5 kDa) venom components were assessed in a mouse dorsal root ganglia (DRG) high-content calcium-imaging assay, known as constellation pharmacology. While the addition of crude venom led to nonspecific cell death and Fura-2 signal leakage due to pore-forming activity, purified small molecular weight fractions of venom demonstrated three main, concentration-dependent and reversible effects on defined heterogeneous cell types found in the primary cultures of mouse DRG. These three phenotypic responses are herein referred to as phenotype A, B and C: excitatory amplification (A) or inhibition (B) of KCl-induced calcium signals, and test compound-induced disturbances to baseline calcium levels (C). Most notably, certain Alatina alata venom fractions showed phenotype A effects in all DRG neurons; Physalia physalis and Chironex fleckeri fractions predominantly showed phenotype B effects in small- and medium-diameter neurons. Finally, specific Physalia physalis and Alatina alata venom components induced direct excitatory responses (phenotype C) in glial cells. These findings demonstrate a diversity of neuroactive compounds in jellyfish venom potentially targeting a constellation of ion channels and ligand-gated receptors with broad physiological implications.

Soil animal communities demonstrate simplification without homogenization along an urban gradient.

Urbanization profoundly impacts biodiversity and ecosystem function, exerting an immense ecological filter on the flora and fauna that inhabit it, oftentimes leading to simplistic and homogenous ecological communities. However, the response of soil animal communities to urbanization remains underexplored, and it is unknown whether their response to urbanization is like that of aboveground organisms. This study investigated the influence of urbanization on soil animal communities in 40 public parks along an urbanization gradient. We evaluated soil animal abundance, diversity, and community composition and related these measures to urban and soil characteristics at each park. The most urbanized parks exhibited reduced animal abundance, richness, and Shannon diversity. These changes were influenced by many variables underscoring the multifaceted influence of urbanization on ecological communities. Notably, contrary to our expectation, urbanization did not lead to community homogenization; instead, it acted stochastically, creating unique soil animal assemblages. This suggests that urban soil animal communities are concomitantly shaped by deterministic and stochastic ecological processes in urban areas. Our study highlights the intricate interplay between urbanization and soil animal ecology, challenging the notion of urban homogenization in belowground ecosystems and providing insight for managing and preserving belowground communities in urban areas.

Geographical variation and genetic diversity of Parashorea chinensis germplasm resources.

Parashorea chinensis is a rare monodominant species in southwest China known for its production of high-quality timber, is facing decline due to its narrow distribution, human interference and habitat destruction. However, there are no reports on genetic diversity and geographical variation of phenotypic traits of P. chinensis. In this study, phenotypic characters and genetic diversity of 15 germplasms resources from five provenances in southwest China were investigated, and their relationships with geographical and environmental factors was discussed. Our results revealed a rich phenotypic diversity among the germplasms, with variation coefficients ranging from 3.63% to 45.49%. Among the studied germplasms, NP03 from Napo and ML02 from Mengla region exhibited superior phenotypic traits. Notably, NP03 also demonstrated the highest genetic diversity. Genetic differentiation analyses including genetic differentiation coefficient (0.6264) and gene flow (0.3736) illustrated that genetic variation was most prevalent among populations. Furthermore, redundancy analysis showed that temperature related factors (maximum air temperature, annual mean temperature and minimum air temperature) significantly affected phenotypic variation. Similarly, altitude, longitude, latitude, annual mean precipitation and the minimum air temperature significantly impacted the level of genetic diversity. The molecular variation of the natural population of P. chinensis followed a certain geographical pattern. Our finding indicated abundant phenotypic variation among P. chinensis germplasms. However, populations exhibited low levels of genetic diversity alongside high genetic differentiation, potentially contributing to the species' rarity. Based on our results, NP03 and ML02 germplasm could be used as the parents for breeding superior germplasm of P. chinensis. Overall, this study provides valuable insights into germplasm diversity and conservation, genetic improvement, and utilization of P. chinensis.

Independent effects of tree diversity on aboveground and soil carbon pools after six years of experimental afforestation.

Planting diverse forests has been proposed as a means to increase long-term carbon (C) sequestration while providing many co-benefits. Positive tree diversity-productivity relationships are well established, suggesting more diverse forests will lead to greater aboveground C sequestration. However, the effects of tree diversity on belowground C storage have the potential to either complement or offset aboveground gains, especially during early stages of afforestation when potential exists for large losses in soil C due to soil decomposition. Thus, experimental tests of the effects of planted tree biodiversity on changes in whole-ecosystem C balance are needed. Here, we present changes in above- and belowground C pools 6 years after the initiation of the Forests and Biodiversity experiment (FAB1), consisting of high-density plots of one, two, five, or 12 tree species planted in a common garden. The trees included a diverse range of native species, including both needle-leaf conifer and broadleaf angiosperm species, and both ectomycorrhizal and arbuscular mycorrhizal species. We quantified the effects of species richness, phylogenetic diversity, and functional diversity on aboveground woody C, as well as on mineral soil C accumulation, fine root C, and soil aggregation. Surprisingly, changes in aboveground woody C pools were uncorrelated to changes in mineral soil C pools, suggesting that variation in soil C accumulation was not driven by the quantity of plant litter inputs. Aboveground woody C accumulation was strongly driven by species and functional identity; however, plots with higher species richness and functional diversity accumulated more C in aboveground wood than expected based on monocultures. We also found weak but significant effects of tree species richness, identity, and mycorrhizal type on soil C accumulation. To assess the role of the microbial community in mediating these effects, we further compared changes in soil C pools to phospholipid fatty acid (PLFA) profiles. Soil C pools and accumulation were more strongly correlated with specific microbial clades than with total microbial biomass or plant diversity. Our results highlight rapidly emerging and microbially mediated effects of tree biodiversity on soil C storage in the early years of afforestation that are independent of gains in aboveground woody biomass.

The state of the bats in North America.

The world's rich diversity of bats supports healthy ecosystems and important ecosystem services. Maintaining healthy biological systems requires prompt identification of threats to biodiversity and immediate action to protect species, which for wide-ranging bat species that span geopolitical boundaries warrants international coordination. Anthropogenic forces drive the threats to bats throughout North America and the world. We conducted an international expert elicitation to assess the status of 153 bat species in Canada, the United States, and Mexico. We used expert assessment to determine the conservation status, highest impact threats, and recent population trends for these species. We found that 53% of North American bat species have moderate to very high risk of extinction in the next 15 years. The highest impact threats varied with species and country, and four IUCN threat categories had the greatest overall impacts: Climate Change, Problematic Species (including disease), Agriculture, and Energy Production. Experts estimated that 90% of species assessed had decreasing population trends over the past 15 years, demonstrating the need for conservation action. Although the state of North American bats is concerning, we identify threats that can be addressed through internationally collaborative, proactive, and protective actions to support the recovery and resilience of North American bat species.

Inspiration from Visual Ecology for Advancing Multifunctional Robotic Vision Systems: Bio-inspired Electronic Eyes and Neuromorphic Image Sensors.

In robotics, particularly for autonomous navigation and human-robot collaboration, the significance of unconventional imaging techniques and efficient data processing capabilities is paramount. The unstructured environments encountered by robots, coupled with complex missions assigned to them, present numerous challenges necessitating diverse visual functionalities, and consequently, the development of multifunctional robotic vision systems has become indispensable. Meanwhile, rich diversity inherent in animal vision systems, honed over evolutionary epochs to meet their survival demands across varied habitats, serves as a profound source of inspirations. Here, recent advancements in multifunctional robotic vision systems drawing inspiration from natural ocular structures and their visual perception mechanisms are delineated. First, unique imaging functionalities of natural eyes across terrestrial, aerial, and aquatic habitats and visual signal processing mechanism of humans are explored. Then, designs and functionalities of bio-inspired electronic eyes are explored, engineered to mimic key components and underlying optical principles of natural eyes. Furthermore, neuromorphic image sensors are discussed, emulating functional properties of synapses, neurons, and retinas and thereby enhancing accuracy and efficiency of robotic vision tasks. Next, integration examples of electronic eyes with mobile robotic/biological systems are introduced. Finally, a forward-looking outlook on the development of bio-inspired electronic eyes and neuromorphic image sensors is provided.

Restoring native forests from Pinus radiata plantations: natural regeneration of native tree species in response to different harvesting treatments in central Chile

The natural forests of south‐central Chile are known as world biodiversity hotspot. Due to increasing societal demands and certification commitments, a vast extension of these forests that was replaced by commercial exotic tree plantations is now to be restored. Given the magnitude of the area involved, large‐scale approaches based on natural regeneration require consideration. However, experimental evidence for this approach to restoration is lacking in different regions. We conducted a large‐scale replicated experiment to evaluate the response of natural regeneration of native tree species to different harvesting treatments (clearcut, strip‐cutting, and unharvested control) in 20‐year‐old Pinus radiata plantations. For 2 years, we monitored variations in (1) regeneration basal area (dRBA), (2) maximum sapling height (dMH), (3) frequency of free‐growing regeneration (dFGR), and (4) diversity of regenerating tree species. The harvesting treatment had significant effects on dRBA, dMH, and dFGR. The clearcuts showed the highest values of dRBA and dFGR of native species, but also, the highest dRBA of P. radiata regeneration. The strip‐cuttings showed the highest dMH of native species and the highest values of richness, Shannon, and Simpson diversity. Our results suggest that both clearcuts and strip‐cuttings facilitate natural regeneration. Although clearcuts may allow higher rates of natural regeneration establishment than strip‐cuttings, they require periodic control of P. radiata regeneration to prevent suppression of established native regeneration. Strip‐cuttings may require fewer management interventions and allow for higher initial species diversity, although with a potentially longer establishment period and higher risk of damage from residual P. radiata trees experiencing wind throw.

Assessing Carbon Stocks and Ecosystem Functioning in Char (Buchanania lanzan) Forests of Central India

The present study assessment of plant community structure, carbon stock and CO2 sequestration of char (Buchanania lanzan) dominant forest sites in Central India during 2020-22. The forest vegetation was analysed using 20 quadrats (each 10 x 10 m in size for tree layers, 5 x 5 m in size for sapling layers and 1 x 1 m size for seedling layers) within the representative one-hectare plot on each site. The biomass, carbon stock, and carbon dioxide sequestration from three district (Mahasamund, Gariaband, and Kabirdham) char dominated forest sites of dry deciduous forests in Central India were estimated using the non-destructive allometric equation approach. The results revealed that the density of tree, sapling and seedling were ranged from 430-605 stems ha-1, 120-600 stems ha-1 and 28000-34500 stems ha-1, respectively. The basal area of tree and sapling layers were varied from 18.15-29.68 m2 ha-1 and 0.33-1.04 m2 ha-1, respectively. The diversity indices of tree layer viz; Shannon index, Simpson index, Evenness, species richness and beta diversity were ranged from 2.40-2.72, 0.17-0.22, 1.08-1.18, 2.26-3.11 and 5.0-6.0, respectively on different forest site in Central India. The total biomass, carbon stock and CO2 sequestration potential of tree layers were varied from 105.72-216.96 Mg ha-1, 50.22-103.06 Mg ha-1 and 184.29-378.22 Mg ha-1, respectively on char dominant various forest sites in Central India. The correlation coefficients were statistically significant performed between basal area and biomass, carbon stock and CO2 sequestration potential with R2 values of 0.988 at p&lt;0.01 levels. After doing this study, it can be concluded that estimating the biomass and carbon stock in Central India will be useful for managing forests sustainably.

Bond-centric modular design of protein assemblies.

We describe a modular bond-centric approach to protein nanomaterial design inspired by the rich diversity of chemical structures that can be generated from the small number of atomic valencies and bonding interactions. We design protein building blocks with regular coordination geometries and bonding interactions that enable the assembly of a wide variety of closed and opened nanomaterials using simple geometrical principles. Experimental characterization confirms successful formation of more than twenty multi-component polyhedral protein cages, 2D arrays, and 3D protein lattices, with a high (10-50 %) success rate and electron microscopy data closely matching the corresponding design models. Because of the modularity, individual building blocks can assemble with different partners to generate distinct regular assemblies, resulting in an economy of parts and enabling the construction of reconfigurable systems.

PERBANDINGAN JARAK EUCLIDEAN, CITYBLOCK, MINKOWSKI, CANBERRA, DAN CHEBYSHEV DALAM SISTEM TEMU KEMBALI CITRA BATIK

Batik is a highly valuable cultural heritage in Indonesia, showcasing a rich diversity of motifs with deep meaning and aesthetics. To enhance the accessibility and utilization of batik collections, an efficient image retrieval system is essential. This study compares distance measurement methods in a batik image retrieval system: Euclidean, Cityblock, Minkowski, Canberra, and Chebyshev, using a combination of color and texture features. The dataset comprises 50 types of batik images. The results show that the Cityblock method achieves the highest Mean Average Precision (MAP) of 97.71, followed by Canberra with MAP 96.87. The Euclidean method also performs well with a MAP of 94.56, while Minkowski and Chebyshev have lower MAP values of 92.93 and 90.89, respectively. Chebyshev experiences the largest MAP drop when images are rotated (5.98), while Cityblock demonstrates the best resistance to rotation with the smallest MAP drop (1.51). This research successfully developed a Content-Based Image Retrieval (CBIR) system with a GUI in MATLAB and suggests integrating the latest image processing and machine learning techniques for further enhancement.

Extensive longevity and DNA virus-driven adaptation in nearctic Myotis bats.

The rich species diversity of bats encompasses extraordinary adaptations, including extreme longevity and tolerance to infectious disease. While traditional approaches using genetic screens in model organisms have uncovered some fundamental processes underlying these traits, model organisms do not possess the variation required to understand the evolution of traits with complex genetic architectures. In contrast, the advent of genomics at tree-of-life scales enables us to study the genetic interactions underlying these processes by leveraging millions of years of evolutionary trial-and-error. Here, we use the rich species diversity of the genus Myotis - one of the longest-living clades of mammals - to study the evolution of longevity-associated traits and infectious disease using functional evolutionary genomics. We generated reference genome assemblies and cell lines for 8 closely-related (∼11 MYA) species of Myotis rich in phenotypic and life history diversity. Using genome-wide screens of positive selection, analysis of structural variation and copy number variation, and functional experiments in primary cell lines, we identify new patterns of adaptation in longevity, cancer resistance, and viral interactions both within Myotis and across bats. We find that the rapid evolution of lifespan in Myotis has some of the most significant variations in cancer risk across mammals, and demonstrate a unique DNA damage response in the long-lived M. lucifugus using primary cell culture models. Furthermore, we find evidence of abundant adaptation in response to DNA viruses, but not RNA viruses, in Myotis and other bats. This is in contrast to these patterns of adaptation in humans, which might contribute to the importance of bats as a reservoir of zoonotic viruses. Together, our results demonstrate the utility of leveraging natural variation to understand the genomics of traits with implications for human health and suggest important pleiotropic relationships between infectious disease tolerance and cancer resistance.

Linguistic discrimination and diversity: the pivotal role of linguistics in the University of Pennsylvania’s writing program

Abstract This paper outlines a unit on linguistics in the curriculum of the writing seminar taken by all undergraduate students at the University of Pennsylvania. The linguistic unit introduces undergraduates to key concepts from linguistic scholarship, and compels students to engage with these language issues in order to advance their consciousness of linguistic inequity and their appreciation of linguistic diversity. Taking our cue from linguists, the unit focuses on the descriptive and contrasts it with the prescriptive approach with which they are typically accustomed. It introduces foundational ideas about language, languaging, and linguistic discrimination through readings and videos. Students write guided reflections in response to the readings and screenings, culminating in a personal narrative and questions they share with their peers on an online discussion board, exploring their own and others’ language use or language attitudes. Upon completion of this unit, many students confirm one of the unit’s learning outcomes by expressing a new awareness of a linguistic climate that they had previously assumed was neutral. Our goal, in part, is to render the campus’s linguistic climate more equitable by advancing students’ consciousness of linguistic inequity and appreciation of the rich diversity of their voices.

Identification of Volatile Organic Compounds and Analysis of Aroma Characteristics in Ten Pear Syrups.

Aroma in food plays an important role in food perception and acceptance, which depends on various mixtures of volatile organic compounds (VOCs). Moreover, VOCs are of great significance for aroma identification. In this study, headspace solid-phase microextraction (HS-SPME) combined with gas chromatography-mass spectrometry (GC-MS) technology was used to determine the VOCs in 10 pear syrups. A total of 127 VOCs were quantitatively determined, including 9 common VOCs and 46 characteristic VOCs of 10 pear syrups. The pear syrups were divided into three categories by cluster analysis, and thirty-eight differential VOCs were obtained using orthogonal partial least squares discrimination analysis (OPLS-DA) and fourteen key VOCs were selected by odor activity value (OAV). It was revealed that the key and common aroma components of pear syrups were butanoic acid, methyl ester, 2-methyl-, methyl ester and Hexanoic acid, and ethyl ester. The characteristic and differential VOCs were 10-Undecen-1-ol, Hexadecanal, n-Propylacetate, Cyclohexanol, 5-methyl-2-(1-methylethyl)-, (1S,2R,5S)-, Methional, Disulfide, dimethyl, 8-Nonenoic acid, ethyl ester, Naphthalene, 1,2-dihydro-1,1,6-trimethyl-, 3H-Purin-6-amine, N,N,3-trimethyl-, 2-Octanol,2,6-dimethyl-, Furyl hydroxymethyl ketone, Heptane, 2,2,4,6,6-pentamethyl-, and Butanoic acid,2-methyl-,methyl ester. The above results showed that different pear syrups had rich diversity in aroma compounds, with some components being shared among them while others are exclusive to specific syrups.

Unraveling the Genomic Diversity of the Pseudomonas putida Group: Exploring Taxonomy, Core Pangenome, and Antibiotic Resistance Mechanisms.

The genus Pseudomonas is characterized by its rich genetic diversity, with over 300 species been validly recognized. This reflects significant progress made through sequencing and computational methods. Pseudomonas putida group comprises highly adaptable species that thrive in diverse environments and play various ecological roles, from promoting plant growth to being pathogenic in immunocompromised individuals. By leveraging the GRUMPS computational pipeline, we scrutinized 26363 genomes labeled as Pseudomonas in NCBI GenBank, categorizing all Pseudomonas spp. genomes into 435 distinct species-level clusters or cliques. We identified 224 strains deposited under the taxonomic identifier "Pseudomonas putida" distributed within 31 of these species-level clusters, challenging prior classifications. Nine of these 31 cliques contained at least six genomes labeled as "Pseudomonas putida" and were analyzed in depth, particularly clique_1 (P. alloputida) and clique_2 (P. putida). Pangenomic analysis of a set of 413 P. putida group strains revealed over 2.2 million proteins and more than 77000 distinct protein families. The core genome of these 413 strains includes 2226 protein families involved in essential biological processes. Intraspecific genetic homogeneity was observed within each clique, each possessing a distinct genomic identity. These cliques exhibit distinct core genes and diverse subgroups, reflecting adaptation to specific environments. Contrary to traditional views, nosocomial infections by P. alloputida, P. putida, and P. monteilii have been reported, with strains showing varied antibiotic resistance profiles due to diverse mechanisms. This review enhances the taxonomic understanding of key P. putida group species using advanced population genomics approaches and provides a comprehensive understanding of their genetic diversity, ecological roles, interactions, and potential applications.

Characterization of newborn gut microbiota according to the pre-gestational maternal nutritional status and delivery mode.

The aim of this study is to characterize the composition of the newborn gut microbiota based on the maternal pre-pregnancy nutritional status and the delivery mode. A biological sample was collected from the anal mucosa of the newborns between 24 and 48h after delivery, as it was not possible to collect a meconium sample at that time. A general data collection questionnaire was administered. The microbiome of the samples was analyzed by next-generation sequencing of the hypervariable regions v3-v4 of the 16S gene. Alpha diversity analyses were performed using the Observed Richness and Shannon diversity index metrics and Beta diversity analyses were conducted using Nonmetric multidimensional scaling with Weighted Unifrac, Differential abundance analysis was performed using a Negative Binomial Wald Test with maximum likelihood estimation for coefficients of Generalized Linear Models. Newborns of obese mothers exhibited lower alpha diversity compared to newborns of mothers with adequate BMI (body mass index). We observed variation in the composition of the microbial community in newborn stool samples, both from mothers with overweight/obesity and those with adequate pre-pregnancy BMI. We observed a visible correlation between the mode of delivery and the newborn's microbiota. We found variation in the overall composition of the microbial community in the stools of newborns, regardless of the delivery mode. The results of our study demonstrate differences in the microbiota of neonates born via cesarean section compared to those born vaginally as well as differences in newborns of mothers with overweight/obesity compared to those with an adequate pre-pregnancy BMI.

Sulawesi stream fish communities depend on connectivity and habitat diversity.

Streams provide an array of habitat niches that may act as environmental filters for fish communities. The tropical island of Sulawesi in Indonesia is located in the Wallacea, a region isolated by marine barriers from the Asian and Australian faunas. Primary freshwater fishes are naturally absent in the Wallacea, including Sulawesi's numerous coastal streams. Diadromous species are in contrast species-rich in the area. The knowledge available on stream fishes in the Wallacea is largely restricted to taxonomic work and studies targeting single species groups, whereas baseline data on fish ecology remain extremely scarce. Such data and a deeper understanding of stream fish ecology are, however, urgently required for purposes such as informed management. We assumed that the stream fish assemblages are dominated by recruitment from the sea and are structured by macro- and microhabitat diversity. To test this hypothesis, we quantified the occurrence of individual fishes by point abundance electrofishing at 33 streams across Sulawesi. The 4632 fishes obtained represent 58 species out of 24 families. The native fishes recorded are mainly amphidromous (34 species), euryhaline (five species), and catadromous (five species). Gobiiformes make up the vast majority of records, dominated by Oxudercidae (22 species) and Eleotridae (five species). Only two of the species recorded are endemic to Sulawesi, including a single species strictly confined to freshwaters. Ten species, making up 6% of the fishes caught, are not native to Sulawesi. The outlying mean index (OMI) and BIOENV analyses suggest that effects on the scale of macro- and microhabitat shape fish assemblage composition, ranging from pH, conductivity, and temperature to current velocity, substrate, canopy cover, and elevation. Habitat niche use of species along the first two OMI axes is complementary and fine-scaled, covering a wide range of the available habitat space. Juvenile and adult conspecifics share similar habitat niches in most of the cases. Niche breadths overlap, but niche specialization is significant in most of the species. Non-native fishes link into the assemblages at the margins of habitat space, with substantial niche overlaps to native species. The present findings show that the native fish communities in coastal streams of Sulawesi are largely composed of species depending on access to the sea, highlighting the importance of connectivity down to the estuaries and sea. The ichthyofauna shows a rich diversity in habitat use, and the availability of alternative habitats along the altitudinal gradient provides plausible filters for species establishment. Non-native fishes are locally abundant, pose substantial potential for changing communities, but are still stocked intentionally. We stress the need for incorporating the need for connectivity and maintained habitat quality into management decisions, and a critical evaluation of stocking activities.

Lineage diversity in a Melanesian lizard radiation (Gekkonidae: Nactus) further highlights exceptional diversity and endemism in eastern Papua New Guinea

AbstractNew Guinea and surrounding islands are home to some of the richest assemblages of insular biodiversity in the world. The key geological drivers of species richness in this region are largely considered to be mountain uplift and development of offshore archipelagos—some of which have accreted onto New Guinea—with the role of mountain uplift and elevational gradients receiving more attention than the role of isolation on islands. Here, we examine the distribution of lineage richness and body-size diversity in a radiation of Melanesian lizards that is almost entirely absent from montane habitats but closely associated with islands—the geckos of the genus Nactus. Our data indicate that eastern New Guinea—centred on the East Papuan Composite Terrane (EPCT)—shows particularly high levels of endemism and body-size diversity and is also inferred to be a source area for multiple independent colonisations elsewhere in New Guinea, the Pacific and Australia. Two Nactus lineages in Australia have closest relatives occurring to the north of New Guinea’s Central Cordillera, suggesting dispersal through this area in the mid-Miocene, possibly via seaways that would have isolated the islands to the east and west of the proto-Papuan region. Syntopic species tend to differ in body length; however, at a phylogenetic scale, this trait appears to be conservative, with small-sized and large-sized species clustered into separate lineages. These data suggest that species richness in Melanesian Nactus is in part explained by morphological diversification enabling the presence of sympatric communities to exist, but to a greater extent by multiple instances of dispersal and extensive allopatric and parapatric speciation, especially in and around the islands of the EPCT.