Korean pine (Pinus koraiensis Siebold & Zucc.) is an important timber and economic tree species in northeast China. Its seeds serve as both a primary means of propagation and a significant economic product. In this study, we identified 12 full-length MADS-box genes based on the Korean pine flower-induced transcriptome data available in our laboratory. These genes were identified through multiple sequence alignment and screening for conserved structural domains. We analyzed the genetic relationships of these genes and predicted their physicochemical properties. Additionally, we examined the expression patterns of three SHORT VEGETATIVE PHASE (SVP) genes across different tissues and developmental stages of Korean pine. The results indicate that the amino acid composition, molecular weight, isoelectric point, and other physicochemical properties of the MADS-box gene family in Pinus koraiensis are generally similar, though some individual variations are observed. A total of 12 MADS-box family genes were identified from the Korean pine transcriptome, distributed across five subfamilies. Conserved motif analysis revealed that these genes share similar conserved sequences. Structural and physicochemical analyses showed that genes with similar sequences exhibited comparable characteristics. Expression levels of the SVP genes varied significantly across different developmental stages and tissues, with the expression of the three SVP genes in leaves being markedly higher than in buds (approximately 200-fold). The expression levels of these genes in leaves were not only higher than in buds but also exceeded those in other tissues. Based on these findings, we conclude that these three SVP genes primarily play a suppressive role in the process of flower bud formation, helping Korean pine maintain a juvenile state under certain conditions, and are also involved in the growth and development of its leaves. This research provides a basis for future studies on the flowering induction mechanism in Korean pine.
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