Variable Resistance Research Articles

Antimicrobial resistance pattern of anaerobic bacteria causing lower respiratory tract infections

BackgroundAnaerobes are normal flora of the human body. However, they can cause serious infections in humans. Anaerobic bacteria are known to cause respiratory infections like pneumonia and acute exacerbation of chronic lower airway infections. These are often missed due to the complexity of their isolation and identification. Hence, this study aimed to study anaerobes causing respiratory tract infections and determine their antibiotic susceptibility.Materials & methodsClinical specimens such as bronchial aspirates and pleural aspirates collected from patients with respiratory diseases attending Vallabhbhai Patel Chest Institute were processed, the anaerobes isolated were identified, and their susceptibilities to various groups of antimicrobials were studied using standard microbiological methods.ResultsThree hundred and fourteen patients were included in the study, 154 males and 160 females. Of these 314 patients, 148 (47%) yielded anaerobes in their clinical samples. Seventy patients had more than one type of anaerobic organism. Hence, 235 isolates were recovered belonging to as many as 17 genera. The MIC of seven antibiotics on 154 isolates was tested. The isolates belonged mostly to the genera Bacteroides, Prevotella, Veillonella, and Actinomyces. Variable resistance was observed to most classes of antibiotics by many genera.ConclusionsMetronidazole is commonly used against anaerobes, but the study showed that the isolates were 20–30% resistant to the antibiotic. Starting this as an empirical therapy might lead to treatment failure.

In vitro evaluation of probiotic properties of yeasts and lactic acid bacteria isolated from ersho samples collected from different parts of Ethiopia

ABSTRACT Ersho is an undefined starter culture used for Ethiopian injera production, and it is a good source of yeasts and lactic acid bacteria (LAB). However, few researchers have been done on the characterization of yeasts and LAB from ersho samples as a source of probiotics. The objective of the current work was to isolate and screen yeasts and LAB from ersho samples and in vitro characterization of their probiotic properties. An experimental research design was used. A total of 55 ersho samples were collected. Based on the ersho samples, 220 yeast colonies and 220 LAB colonies were isolated and purified. For the probiotic characterization, three yeasts (4A, 14D, 54A) and three LAB (1A, 13E, and 55A) were chosen. The isolates 4A, 14D, 54A, 1A, 13E, and 55A were identified as Saccharomyces cerevisiae KRSAN1, Saccharomyces cerevisiae JYC2577, Kazachstania humilis, Enterococcus lactis, Lactobacillus paracasei, and Lactobacillus species, respectively. All the isolates showed positive probiotic characteristics. They had very good acid resistance (percentage survival > 80%), high bile salt resistance (percentage survival > 140%), high cell surface hydrophobicity (>40%), high levels of auto-aggregation (>40%), variable co-aggregation with pathogens (ranged between 42% and 72%), variable antimicrobial activity (clear halo zone ranged from 4.0 to 31 mm), and variable antibiotic resistance responses. The results indicated that the ersho samples can be used as yeast and LAB sources for developing food and probiotic starter cultures.

Genetic diversity, population structure and anthracnose resistance response in a novel sweet sorghum diversity panel.

Sweet sorghum is an attractive feedstock for the production of renewable chemicals and fuels due to the readily available fermentable sugars that can be extracted from the juice, and the additional stream of fermentable sugars that can be obtained from the cell wall polysaccharides in the bagasse. An important selection criterion for new sweet sorghum germplasm is resistance to anthracnose, a disease caused by the fungal pathogen Colletotrichum sublineolum. The identification of novel anthracnose-resistance sources present in sweet sorghum germplasm offers a fast track towards the development of new resistant sweet sorghum germplasm. We established a sweet sorghum diversity panel (SWDP) of 272 accessions from the USDA-ARS National Plant Germplasm (NPGS) collection that includes landraces from 22 countries and advanced breeding material, and that represents ~15% of the NPGS sweet sorghum collection. Genomic characterization of the SWDP identified 171,954 single nucleotide polymorphisms (SNPs) with an average of one SNP per 4,071 kb. Population structure analysis revealed that the SWDP could be stratified into four populations and one admixed group, and that this population structure could be aligned to sorghum's racial classification. Results from a two-year replicated trial of the SWDP for anthracnose resistance response in Texas, Georgia, Florida, and Puerto Rico showed 27 accessions to be resistant across locations, while 145 accessions showed variable resistance response against local pathotypes. A genome-wide association study identified 16 novel genomic regions associated with anthracnose resistance. Four resistance loci on chromosomes 3, 6, 8 and 9 were identified against pathotypes from Puerto Rico, and two resistance loci on chromosomes 3 and 8 against pathotypes from Texas. In Georgia and Florida, three resistance loci were detected on chromosomes 4, 5, 6 and four on chromosomes 4, 5 (two loci) and 7, respectively. One resistance locus on chromosome 2 was effective against pathotypes from Texas and Puerto Rico and a genomic region of 41.6 kb at the tip of chromosome 8 was associated with resistance response observed in Georgia, Texas, and Puerto Rico. This publicly available SWDP and the extensive evaluation of anthracnose resistance represent a valuable genomic resource for the improvement of sorghum.

THU143 A Novel Maternally Inherited GNAS Variant In A Family With Hyperphagia And Obesity

Abstract Disclosure: P. Purushothaman: None. A. Ramakrishnan: None. E.F. Gevers: None. Introduction: Heterozygous inactivating mutations in the maternal allele of the GNAS gene typically result in pseudohypoparathyroidism (PHP) characterized by developmental delay, short stature, obesity, hormone resistance and bone abnormalities. Recently, GNAS variants were also described in 1% of patients in the UK Genetics of Obesity cohort, resulting in reduced MC4R signalling. Here, we report another novel GNAS variant in family with hyperphagia and obesity and only mild features of PHP. Case: The proband presented at 6 years with hyperphagia and obesity from age 3 years. BMI was 30.4 (4.1 SDS) with height +1.9 SDS, and head circumference (HC) + 3.0 SDS. She had subtle brachydactyly, short toes and a café au lait patch. Developmental milestones and cognitive achievements were mildly delayed. Her 12-year-old brother [ height +2.1 SDS, weight +3.1 SDS, BMI 29.55 (2.9 SDS), HC +3.6 SDS] had been followed in an obesity clinic for a few years with hyperphagia, obesity, delayed developmental milestones and a recent diagnosis of autism. He also had subtle brachydactyly, as did the mother who was also obese (BMI 38.9) with a normal height but had normal cognition. Results: In the proband, initial investigations did not suggest hormone resistance. However, at 8.7 years, PTH was high [9.5 pmol/L (0.7-5.6)] with normal calcium and Vitamin D; TSH 6.6 mU/L (<6), FT4 11.8 pmol/L (10.8 - 19.0). She had hyperlipidaemia and fatty liver. X-ray hand showed generalised mild brachydactyly with a short right fifth metacarpal. In the brother, PTH tested for the first time at 12.9 years was 18.4 pmol/L (1.6-6.9), calcium and vitamin D were normal; TSH 4.04 mU/L (<4.2) and FT4 13.4 pmol/L. Next Generation Sequencing using the Cambridge Obesity gene panel detected a novel heterozygous (c.791A>C, p.(Asn264Thr) variant in exon 10 of GNAS in the proband and subsequently in the mother and brother confirming maternal inheritance. This variant has not been reported in control databases (1000 Genomes, ESP, ExAC and gnomAD, Human Gene Mutation Database and ClinVar). The variant is in a highly conserved region susceptible to missense mutations and has been classified as pathogenic using ACMG and ACGS guidelines. Discussion: In conclusion, we describe a novel heterozygous inactivating GNAS variant c.791A>C, p.Asn264Thr resulting in hyperphagia, obesity, developmental delay, macrocephaly, mild brachydactyly, tall stature and variable biochemical mild hormone resistance in 2 siblings and resulting in obesity, mild brachydactyly without cognitive impairment in the mother. These cases demonstrate the clinical heterogeneity of the monogenic disease. Clinical and biochemical screening for PHP and genetic screening for GNAS variants should be performed in patients presenting with obesity, even in the absence of classical signs of PHP, to reduce diagnostic delay. Presentation: Thursday, June 15, 2023

Low-Noise Low-Power Ultrasound AFE With Continuous TGC Built in Both TIA and Beamformer.

This article presents a low-noise high-power-efficiency analog front-end (AFE) for capacitive-micromachined-ultrasonic transducers (CMUT). Implemented in 28-nm CMOS technology, the proposed AFE features three-stage continuous time-gain compensation (TGC) embedded in both trans-impedance amplifiers (TIAs) and an analog beamformer to provide a large compensation range with no extra power-consumption cost. The use of noise cancellation and capacitive feedback optimizes the noise performance of TIAs. The first stage of the TGC is built in the TIA by adjusting the positive and negative resistance loads, which are composed of voltage-controlled transistor arrays. An all-pass passive network is used as the delay unit of the analog beamformer, meanwhile achieving the second TGC stage. Phase shift for all frequency components in the ultrasound pass-band is manifested as a delay to the echoes. The third stage of the TGC is merged with a summing unit, which is a closed-loop amplifier with variable resistance feedback. The design takes into account the ability to handle large signals and power consumption, with TIA and beamforming operating at voltages of 2.5 V and 0.9 V, respectively. Experimental results show that the proposed AFE achieves a 2.11 pA/√Hz input-referred noise (IRN) at the 5 MHz center frequency of the echoes while consuming only 1.02 mW/channel. A total exponential TGC range of 60 dB with continuous ranges of 12 dB, 24 dB, and 24 dB assigned to three stages has been verified for this work.

Study and experimental analysis of the effect of static stretching combined with resistance training on neck and shoulder syndrome in college students in the context of big data

Abstract In order to explore the effect of variable resistance training with edge computing and information physical system model combined with computer vision under static traction in neck and shoulder rehabilitation training of college students. In this paper, 90 cases of neck and shoulder patients admitted to XX Hospital from February 2022 to December 2022 with neck and shoulder syndrome in a university in Shanghai, were selected as study subjects and randomly divided into 45 cases of the observation group and 45 cases of the control group. Edge computing and physical information system were used for data processing, and patients in the observation group received variable resistance training combined with static traction, and patients in the control group received static traction. The results showed that after rehabilitation training, the effective rates of the observation group and the control group were 91.11% and 71.11%, respectively, and the differences between the groups were statistically significant (P<0.05). Comparing the visual analog scale (VAS) and neck disability index (NDI) of the two groups, the VAS score of the observation group was lower than that of the control group after treatment (P<0.05), and the NDI score of the observation group was lower than that of the control group (P<0.05). It indicates that the use of static stretching and resistance training for neck and shoulder syndrome in college students is more effective in relieving patients’ neck pain and is worthy of clinical promotion and application.

Tumor Cell-Intrinsic PD-L1 Effects on Radiation-Induced Locoregional Antitumor Immunity

Targeting PD-L1 is a beneficial strategy to reinvigorate antitumor immunity, however variable response and resistance are challenging and suggest the need for multimodality approaches. Tumor cell-intrinsic PD-L1 signals also regulate non-canonical pathogenic pathways that may impact treatment resistance. Ionizing radiation (IR) can induce antitumor immunity and has demonstrated therapeutic synergy with immunotherapy in some cases, however tumor-driven immunologic mechanisms affecting clinical outcomes remain incompletely understood. In this study, we investigated the impact of tumor cell-intrinsic PD-L1 signals on IR-induced locoregional immune response and tumor control. We used orthotopic B16-F10 melanoma (WT-B16) and 4T1 triple negative breast cancer (WT-4T1) murine tumor models, as well as PD-L1 disabled variants (KO) generated by CRISPR/Cas9, implanted bilaterally. IR (10 Gy) was targeted at one tumor alone to evaluate both direct and indirect IR effects based on tumor PD-L1 status. We evaluated response by tumor volume (TV) measurements, flow cytometry of tumor-infiltrating lymphocytes (TILs) and tumor draining lymph nodes (TDLNs) in both irradiated and unirradiated compartments, and granzyme B (GZB) PET imaging to assess functional in vivo changes. Chemokine-based multiplex assays were used to assess cell lines receiving IR (4Gy) and ex vivo tumor lysates and serum. IR-induced local tumor control was not significantly affected based on tumor PD-L1 status, however deactivation of tumor cell PD-L1 enhanced IR-induced regional tumor control. Unirradiated WT tumors in mice harboring irradiated KO but not irradiated WT tumors demonstrated a significant mean reduction in TV with instances of complete distant tumor regression. PET imaging demonstrated a nearly 2-fold higher concentration of GZB in KO versus WT tumors, in line with known locally immunosuppressive effects of tumor PD-L1. Remarkably, GZB levels were >1.5-fold higher in unirradiated WT tumors in mice harboring an irradiated KO versus WT tumor, which correlated with a 50% increase in PD-1+CD8+ T cells. Higher levels of CD62+CD44- naïve CD4+ (4-fold) and CD8+ (2-fold) memory T cells were seen in TDLNs of irradiated KO versus WT tumors. Cytokine levels positively correlated with immune recruitment and activation status, as CXCL10, CCL2 and CCL5 were significantly upregulated in PD-L1 KO versus WT tumors cells. Results from this study demonstrate cell-intrinsic PD-L1 inhibits IR-induced locoregional immune activation and frequency of regional tumor control, with clinical implications including therapeutic targeting of tumor cell-intrinsic PD-L1 signals to enhance IR-induced immunogenicity, utility of IR based on tumor PD-L1 status particularly in the metastatic setting, and immunotherapy combinations. Future studies investigating mechanisms of resistance to IR-induced immune activation to enhance responsiveness are warranted.

Generating characteristics and experimentation of counter rotating dual rotor wound field flux switching wind generator

AbstractIn this paper, counter rotating dual rotor wound field flux switching wind power generator is revisited to study the generating characteristics of the AC output power curves based on finite element analysis (FEA) and experimental study. Analysis are performed under dynamic conditions, such as variable resistance, field excitation and speed. Also, electromagnetic performance is studied under variation of the field and armature currents. Analysis reveals that outer port machines with higher power capability and better electromagnetic performance compared to the inner port counterparts, although with higher fluctuations exhibited on the torque profiles of the former due to higher slotting effects. From the power generation characteristics curves, it is clear that the developed wind generator is able to produce reliable performance over a wide operating range. The accuracy of the FEA predicted results are validated, experimentally.The cover image is based on the Research Article Generating characteristics and experimentation of counter rotating dual rotor wound field flux switching wind generator by Wasiq Ullah et al., https://doi.org/10.1049/elp2.12374.

Effects of Continuous Non-Invasive Blood Pressure Monitoring on Intraoperative Hemodynamics and Postoperative Myocardial Injury in Craniotomy: Comparison Between Groups Based on Self-Control and Propensity Score Matching

Objective: To explore the effect of continuous non-invasive blood pressure monitoring on intraoperative hemodynamics and postoperative myocardial injury in craniotomy. Methods: 120 cases of elective craniotomy were divided into the self-control group (continuous non-invasive blood pressure monitoring and intermittent cuff non-invasive blood pressure monitoring, CNAP group) and propensity score matching group (only intermittent cuff non-invasive blood pressure measurement in previous craniotomy, PSM group); Goal-directed hemodynamic management in CNAP group included heart rate (HR), blood pressure (BP), stroke volume (SV), stroke variability (SVV), and systemic vascular resistance index (SVRI). The main index is to compare the troponin level within 72 hours after operation between the CNAP group and the PSM group; The secondary indicators are the comparison of the hemodynamic conditions between the CNAP group and the PSM at 10 specific time points. Results: The incidence of postoperative myocardial injury in the CNAP group was significantly lower than that in the PSM group (12% vs. 30%, P = 0.01); in the CNAP group hypotensive episodes (6 vs. 3, P = 0.01), positive balance of fluid therapy (700 vs. 500 mL, P < 0.001), more use of vasoactive drugs (29 vs. 18, P = 0.04), more stable hemodynamics medical status (P = 0.03) were recorded. Conclusion: The hemodynamic management strategy based on continuous non-invasive blood pressure monitoring can reduce the incidence of myocardial injury after elective craniotomy and maintain a more stable hemodynamic state.

Acute Effects of Back Squat Combined with Different Elastic Band Resistance on Vertical Jump Performance in Collegiate Basketball Players.

The purpose of this study was to compare the acute effects of back squat exercise with or without elastic band on countermovement jump performance. Thirteen collegiate male basketball players (age: 20.5 ± 0.9 years; height: 188.5 ± 8.5 cm; body mass: 82.8 ± 12.9 kg) completed 5 familiarization and 4 experimental sessions separated by at least 48 hours. In the experimental sessions, the order of the conditions was randomized so that the participants performed 1 set of 3 repetitions of barbell back squat at 85% of their one-repetition maximum (1-RM), 1 set of 3 repetitions of back squat at 85% 1-RM with 20% variable resistance training (VRT), 30%VRT, or 40%VRT of the total load coming from the elastic band. Countermovement jump performance was assessed before (baseline), 30 seconds, 3 minutes, 6 minutes, and 9 minutes following each condition. Jump height, rate of force development, peak power, and vastus lateralis, vastus medialis, and medial gastrocnemius electromyography data were collected. Compared with the baseline, 30%VRT significantly improved jump height at 3 minutes post-exercise by 1.3 cm (P < 0.001) and 6 minutes post-exercise by 1.2 cm (P = 0.005); 40%VRT significantly improved jump height from 30 seconds up to the 9th minute (1.2 to 1.9 cm, P ≤ 0.036). The superior jump height was also accompanied by improved kinetic and electromyography data. No significant changes were observed in the barbell back squat and 20%VRT conditions. In conclusion, back squat at 85% 1-RM with 40% elastic band resistance led to superior vertical jump performance with an optimal time window of 3 minutes.

Acute Effects of Back Squat Combined with Different Elastic Band Resistance on Vertical Jump Performance in Collegiate Basketball Players

The purpose of this study was to compare the acute effects of back squat exercise with or without elastic band on countermovement jump performance. Thirteen collegiate male basketball players (age: 20.5 ± 0.9 years; height: 188.5 ± 8.5 cm; body mass: 82.8 ± 12.9 kg) completed 5 familiarization and 4 experimental sessions separated by at least 48 hours. In the experimental sessions, the order of the conditions was randomized so that the participants performed 1 set of 3 repetitions of barbell back squat at 85% of their one-repetition maximum (1-RM), 1 set of 3 repetitions of back squat at 85% 1-RM with 20% variable resistance training (VRT), 30%VRT, or 40%VRT of the total load coming from the elastic band. Countermovement jump performance was assessed before (baseline), 30 seconds, 3 minutes, 6 minutes, and 9 minutes following each condition. Jump height, rate of force development, peak power, and vastus lateralis, vastus medialis, and medial gastrocnemius electromyography data were collected. Compared with the baseline, 30%VRT significantly improved jump height at 3 minutes post-exercise by 1.3 cm (P &lt; 0.001) and 6 minutes post-exercise by 1.2 cm (P = 0.005); 40%VRT significantly improved jump height from 30 seconds up to the 9th minute (1.2 to 1.9 cm, P ≤ 0.036). The superior jump height was also accompanied by improved kinetic and electromyography data. No significant changes were observed in the barbell back squat and 20%VRT conditions. In conclusion, back squat at 85% 1-RM with 40% elastic band resistance led to superior vertical jump performance with an optimal time window of 3 minutes.

Effects Of 4-week Variable Resistance Lower Body Strengthening On Body Composition In Untrained Individuals

Effects Of 4-week Variable Resistance Lower Body Strengthening On Body Composition In Untrained Individuals

In vitro sensitivity of Malassezia furfur isolates from HIV-positive and negative patients to antifungal agents

Malassezia is a lipophilic and lipid-dependent yeast genus belonging to the skin microbiota of humans and other animals. However, due to dysbiosis processes or other factors in the host, this yeast can cause different pathologies, ranging from skin diseases, such as seborrheic dermatitis, to fungemia. Isolation of Malassezia furfur has been reported in HIV-positive patients with or without skin lesions. Due to its opportunistic nature and its variable resistance to antifungal compounds, it is relevant to know the Malassezia sensitivity profiles. To determine the sensitivity to different antifungal agents, of clinical isolates of M. furfur obtained from HIV-positive or negative patients, with or without seborrheic dermatitis. Assessment of isolates sensitivity to itraconazole, voriconazole, fluconazole, and amphotericin B was performed by two techniques: (1) Broth microdilution using Clinical and Laboratory Standards Institute (CLSI) protocol M27-A3 with modifications; and (2) agar tests using Etest®. Isolates obtained from HIV patients showed an increase in the minimum inhibitory concentration of fluconazole, voriconazole, and amphotericin B, compared with those of non-HIV patients. Itraconazole was the antifungal with the lowest minimum inhibitory concentration (MIC) in most isolates. We observed differences in the sensitivity profiles of M. furfur isolates according to the context of the patient. High MIC of antifungals like fluconazole, commonly used for treating pathologies caused by Malassezia, were identified.

Experimental Investigation of Temperature Distribution in a Laminar Boundary Layer over a Heated Flat Plate with Localized Transverse Cold Air Injections

This study presents an experimental investigation focused on the interaction between a transverse injection of cold air (blowing) and the boundary layer over a heated flat plate. The flat plate was equipped with a cylindrical coil heater positioned at its center along the flow direction. The constant heat flux was maintained using a variable resistance potentiometer. The flat plate with the heater was mounted inside a subsonic wind tunnel to sustain a constant laminar air flow. The primary objective of this research was to examine the effects of cold air injections through localized holes in the flat plate near the trailing edge on the thermal boundary layer thickness δt(x,Rex,Pr). The thermal boundary layer thickness was measured using K-type thermocouples and PT-100 RTD sensors, which are made to move precise, small distances using a specially constructed traversing mechanism. Cold air was injected using purposefully fabricated metal capillary tubes force-fitted into holes through the hot flat plate. The metal tubes were thermally insulated using class-F insulation, which is used in electric motor windings. The presented work focused on a fixed free-stream velocity and a fixed cold-injection velocity less than the free-stream velocity but for two-variable heat fluxes. The results show that the thermal boundary layer thickness generally increased due to the secondary cold flow.

Uncovering genetic and metabolite markers associated with resistance against anthracnose fruit rot in northern highbush blueberry.

Anthracnose fruit rot (AFR), caused by the fungal pathogen Colletotrichum fioriniae, is among the most destructive and widespread fruit disease of blueberry, impacting both yield and overall fruit quality. Blueberry cultivars have highly variable resistance against AFR. To date, this pathogen is largely controlled by applying various fungicides; thus, a more cost-effective and environmentally conscious solution for AFR is needed. Here we report three quantitative trait loci associated with AFR resistance in northern highbush blueberry (Vaccinium corymbosum). Candidate genes within these genomic regions are associated with the biosynthesis of flavonoids (e.g. anthocyanins) and resistance against pathogens. Furthermore, we examined gene expression changes in fruits following inoculation with Colletotrichum in a resistant cultivar, which revealed an enrichment of significantly differentially expressed genes associated with certain specialized metabolic pathways (e.g. flavonol biosynthesis) and pathogen resistance. Using non-targeted metabolite profiling, we identified a flavonol glycoside with properties consistent with a quercetin rhamnoside as a compound exhibiting significant abundance differences among the most resistant and susceptible individuals from the genetic mapping population. Further analysis revealed that this compound exhibits significant abundance differences among the most resistant and susceptible individuals when analyzed as two groups. However, individuals within each group displayed considerable overlapping variation in this compound, suggesting that its abundance may only be partially associated with resistance against C. fioriniae. These findings should serve as a powerful resource that will enable breeding programs to more easily develop new cultivars with superior resistance to AFR and as the basis of future research studies.

Identification of QTLs Conferring Resistance to Bacterial Diseases in Rice.

Bacterial panicle blight, bacterial leaf streak, and bacterial brown stripe are common bacterial diseases in rice that represent global threats to stable rice yields. In this study, we used the rice variety HZ, Nekken and their 120 RIL population as experimental materials. Phenotypes of the parents and RILs were quantitatively analyzed after inoculation with Burkholderia glumae, Xanthomonas oryzae pv. oryzicola, and Acidovorax avenae subsp. avenae. Genetic SNP maps were also constructed and used for QTL mapping of the quantitative traits. We located 40 QTL loci on 12 chromosomes. The analysis of disease resistance-related candidate genes in the QTL regions with high LOD value on chromosomes 1, 3, 4, and 12 revealed differential expression before and after treatment, suggesting that the identified genes mediated the variable disease resistance profiles of Huazhan and Nekken2. These results provide an important foundation for cloning bacterial-resistant QTLs of panicle blight, leaf streak, and brown stripe in rice.

Localised surface plasmon resonance inducing cooperative Jahn–Teller effect for crystal phase-change in a nanocrystal

The Jahn–Teller effect, a phase transition phenomenon involving the spontaneous breakdown of symmetry in molecules and crystals, causes important physical and chemical changes that affect various fields of science. In this study, we discovered that localised surface plasmon resonance (LSPR) induced the cooperative Jahn–Teller effect in covellite CuS nanocrystals (NCs), causing metastable displacive ion movements. Electron diffraction measurements under photo illumination, ultrafast time-resolved electron diffraction analyses, and theoretical calculations of semiconductive plasmonic CuS NCs showed that metastable displacive ion movements due to the LSPR-induced cooperative Jahn–Teller effect delayed the relaxation of LSPR in the microsecond region. Furthermore, the displacive ion movements caused photo-switching of the conductivity in CuS NC films at room temperature (22 °C), such as in transparent variable resistance infrared sensors. This study pushes the limits of plasmonics from tentative control of collective oscillation to metastable crystal structure manipulation.

Alternative Splicing for Leucanthemella linearis NST1 Contributes to Variable Abiotic Stress Resistance in Transgenic Tobacco.

Leucanthemella linearis is a marsh plant in the family Compositae. It has good water and moisture resistance and ornamental properties, which makes it one of the important materials for chrysanthemum breeding and genetic improvement. The NST1 (NAC secondary wall enhancement factor 1) gene is associated with the thickening of the secondary walls of fiber cells in the plant ducts and the secondary xylem and plays an important role in plant stress resistance. In this study, two variable spliceosomes of the NST1 gene were identified from a chrysanthemum plant by using bioinformatics, qRT-PCR, transgene, and paraffin section methods to explore the molecular mechanism of the variable splicing of NST1 under abiotic stress. The results show that only three amino acids were found to be different between the two LlNST1 variants. After being treated with salt, drought, and low temperatures, analysis of the expression levels of the LlNST1 and LlNST1.1 genes in Ll showed that LlNST1.1 could respond to low temperatures and salt stress and had a weak response to drought stress. However, the expression level of LlNST1 under the three treatments was lower than that of LlNST1.1. LlNST1 transgenic tobacco showed increased saline-alkali resistance and low-temperature resistance at the seedling stage. LlNST1.1 transgenic tobacco also showed enhanced saline-alkali resistance and drought resistance at the seedling stage. In conclusion, the functions of the two variable spliceosomes of the NST1 gene are very different under abiotic stress. Therefore, this study verified the function of the variable spliceosome of NST1 and improved the stress resistance of the chrysanthemum plant under examination by regulating the expression of the NST protein, which lays a material foundation for the improvement of plant stress resistance materials and has important significance for the study of the resistance of chrysanthemum plants to abiotic stress.

Isoniazid resistance-conferring mutations are associated with highly variable phenotypic resistance

BackgroundHigh-dose isoniazid is recommended in the 9–12 months short-course regimen for multidrug-resistant tuberculosis with inhA mutation. However, there is insufficient evidence to support the assumption of genotypic-phenotypic concordance. This study aimed to identify the genetic mutations associated with high-level phenotypic isoniazid resistance. MethodsClinical isolates from patients with drug-resistant tuberculosis were profiled by whole-genome sequencing and subjected to minimum inhibitory concentration (MIC) testing using MGIT based-method. MICs were performed in concentration ranges based on the mutation present: isolates with no isoniazid resistance-conferring mutations and H37Rv, 0.016–0.256 µg/ml; inhA, 0.256–4.0 µg/ml, katG 1.0–16.0 µg/ml; and inhA + katG, 4.0–64.0 µg/ml. Isolates demonstrating resistance at the upper limit of the concentration range were tested up to the maximum of 64.0 µg/ml. Bootstrap of the mean MICs was performed to increase the robustness of the estimates and an overlap index was used to compare the distributions of the MICs for each mutation profile. ResultsA total of 52 clinical isolates were included in this analysis. Bootstrap MIC means for inhA, katG and inhA + katG were 33.64 (95% CI, 9.47, 56.90), 6.79 (4.45, 9.70) and 52.34 (42.750, 61.66) µg/ml, respectively. There was high overlap between inhA and inhA + katG mutations (eta = 0.45) but not with inhA and katG (eta = 0.19). Furthermore, katG showed poor overlap with inhA + katG mutations (eta = 0.09). Unexpectedly, 4/8 (50.0%) of all InhA mutants demonstrated high-level resistance, while 20/24 (83.3%) of katG mutants demonstrated moderate-level resistance. ConclusionsInhA mutations demonstrated unexpectedly high MICs and showed high overlap with inhA + katG. Contrary to the common belief that katG mutants are associated with high-level resistance, this mutation primarily showed moderate-level resistance.

The effects of subsalt relief on gravity-driven salt tectonics: Results from analogue modelling

Gravity-driven salt-related deformation on passive margins is commonly interpreted as kinematically-linked domains of updip extension and downdip contraction with an intermediate, undeformed zone of translation. Our study uses analogue models to show how salt flow is affected by the subsalt geometry resulting in complex deformation and the alternation of extensional and contractional domains in space and time in translational salt provinces. In our work, the analogue models incorporate subsalt relief associated with half-graben and graben that are realistic geometries along passive margins and combine the effects of gravity spreading in which deformation is driven by differential sedimentary loading, and an early-stage of gravity gliding induced by basin tilt. This approach allows for analysis of how salt flow and overburden deformation are affected by: (1) smoothly dipping subsalt relief; (2) subsalt relief characterized by half-graben with a gently landward dipping extensional fault; (3) subsalt half-graben connected laterally with a distal symmetric graben. For each of these models, we evaluate: 1) the interplay between slipping deformation corresponding to gravity gliding, gravity spreading mechanisms, and subsalt geometry; 2) the spatial and temporal distribution of salt-related structural domains; and 3) the contrasting styles of salt tectonics for different subsalt geometries. In addition, some of the experiments have been repeated considering thicker salt and pre-kinematic overburden and different sedimentation rates. We show that the structures of the subsalt relief variably resist salt flow producing flow mismatch. This variable resistance controls the orientation of the extension and contraction supra-salt structures. Salt surplus and contraction occur over landward dipping base-salt ramps, and a zone of salt depletion and subsidence limited by extensional and contractional hinges occurs over the basinward dipping base-salt ramp. Variations in width and the dip of these base-salt ramps result in stronger flow mismatches and deformation complexity. We also discuss variations in salt flow profile in response to the gravitational forces that drive deformation, allowing a good first-order approximation of viscous salt flow at a regional scale that can be directly compared to examples from various salt-bearing continental margins, particularly the relatively less understood but extremely economically important distal domains of Brazil's Campos and Santos basins.