Waterfowl surveys, especially for endangered waterfowl living in wetlands, are essential to protect endangered waterfowl and to create a management scenario of their habitats. Unmanned aerial vehicles (UAVs) are powerful new tools for waterfowl surveys. In this paper, we propose one method for a habitat survey and another for a waterfowl species distribution survey. The habitat survey method obtained the waterfowl’s habitat and spatial distribution with a UAV automatic flight plan in the aggregation area. The waterfowl species distribution survey was used to detect and identify waterfowl species with high-spatial-resolution images from a free UAV flight plan in the aggregation area or areas where individuals were suspected to be present. The UAV-based data showed not only the area where waterfowl were found, but also additional ground surveys. The results showed that the species and locations of the waterfowl were recorded more accurately and efficiently using the distribution method based on the images from the UAV. The waterfowl habitat type and the number of waterfowl were obtained in detail using the habitat survey method. UAV-derived counts of waterfowl were greater (+37%) than ground counts. The results indicated the feasibility and advantages of using a low-cost UAV survey of large waterfowl in wetland regions with complex vegetation. This study provides one case study of large waterfowl numbers and habitat surveys. The UAV-based methods also provide a feasible and scientific way to obtain basic data for the protection and management of waterfowl.
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