At present, in practice, to model channel reformations in rivers with a deformable bottom, a large number of different formulas are used to calculate the flow of bottom sediments. However, the reliability of channel forecasts performed using the apparatus of mathematical modeling, in most cases, still remains quite low. The quality of channel forecasts performed when designing engineering measures to ensure navigation on rivers is determined, on the one hand, by the correct assessment of the physical nature of sediment transport in natural channel flows, and, on the other hand, by the quality of the applied numerical models. This work is devoted to the verification of the sediment transport model based on studies in hydraulic flumes, in which microforms and mesoforms of a river channel with a secondary type of channel process were simultaneously reproduced. Such problems have not been considered yet. The previous experiments were carried out with a uniform steady-state mode of water movement at one structural level of bottom sediment movement - with the movement of bottom sediments in the form of microforms (dunes) - i. e. on a flat day. The results obtained in the course of the research make it possible to obtain new data, using which it seems possible to improve the quality of modeling of sediment transport in natural channel flows. This line of research, based on the use of the methodology for calculating the discharge of channel sediments using the parameters of dunes, can objectively lead to an increase in the reliability of forecasts of channel reformations when keeping navigation on free and regulated rivers with a moving bottom.