The vertical wind speed profile is crucial to urban ventilation assessment and urban planning/design. This study uses Light Detection and Ranging (LiDAR) observation as benchmark to evaluate accuracy of wind profiles estimated by conventional methods. The conventional methods include Boundary Layer Wind Tunnel (BLWT), Regional Atmospheric Modeling System (RAMS), Power Law (PL), and Weather Research and Forecasting (WRF). The evaluation involves two typical urban sites with different densities under summer weak-wind conditions. Large Eddie Simulations (LES) are conducted to further investigate the sensitivity of urban ventilation assessment results to the deviations of wind profiles. The results indicate significant deviations in LES caused by conventional methods. The largest deviations of wind velocity ratio are found in mesoscale meteorological models (RAMS and WRF (>65%)). Deviations caused by physical and empirical models are smaller but still significant (BLWT (>25%) and PL (>40%)). Consequently, large deviations (>100%) of wind-relevant criterion for outdoor thermal comfort are observed. Finally, to balance accuracy and data availability, we recommend power law method as the optimal method to provide inflow boundary condition for numerical simulations when LiDAR observation is not available. We provide new and valuable understandings to improve urban ventilation assessment in high-density cities.