The actively growing cells (trophozoites) of the amoeba Acanthamoeba castellanii were found to contain one major form of class I RNA polymerase. This enzyme was purified to near homogeneity and had a subunit architecture of (182,000) 1, (122,000) 1, (35,000) 2, (20,800) 2, (19,900) 1, (18,100) 1, and (16,400) 2. The subcellular localization and catalytic properties of the enzyme suggest it to be a cognate of the eucaryotic class I polymerases previously reported. When Acanthamoeba castellanii is transferred to a medium lacking nutrients, the cells undergo a cellular differentiation resulting in the formation of metabolically inactive cells (cyst formation). During this process, the rate of ribosomal RNA synthesis decreases, ceasing by the seventh hour after cyst induction. During this time polymerase II and III activity remains constant and the cells are metabolically active. In contrast to this decrease in rRNA synthesis, we found no change in the level of extractable polymerase I activity ( S. Detke and M. R. Paule, 1975, Biochim. Biophys. Acta, 383, 67–77 ) or in the specific activity of the purified enzyme. Furthermore, the catalytic and chromatographic properties and the subunit architecture of the polymerase remain unchanged. These findings suggest that the rate of rRNA synthesis in Acanthamoeba is not controlled by modifying the number or the structure of the polymerase I molecules present in the cell.
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