Aphis craccivora Koch and Planococcus lilacinus Cockerell are phloem feeders and act as vectors for transmitting plant viruses to agricultural and horticultural crops thereby damaging them. The persistent and widespread use of synthetic, wide-spectrum pesticides has resulted in resistance development that is detrimental to the environment, human health, and natural enemies of pests. The present investigation uses various extraction mediums to examine the insecticidal efficacy of essential oils (EOs) isolated from Murraya koenigii (L.) leaves. Increase in yield was observed in the EO extracted using NADES-AHD [0.16% (obtained with hydro-distillation)] to 0.30% [obtained with N-1 (glycerol:lactic acid)]. EO obtained with water was found more effective against A. craccivora (LD50 = 0.89 µL/insect) and followed by N-1 (glycerol:lactic acid), and N-3 (choline chloride:citric acid) (LD50 = 1.29-1.38 µL/insect). Similarly, EO isolated by water and N-4 (choline chloride:oxalic acid) was effective against P. lilacinus (LD50 = 2.63-3.06 µL/insect). Additionally, the EO prepared by water substantially reduced glutathione S-transferase (GST) and acetylcholinesterase (AChE) in target pests, suggesting that these enzymes may be the EOs' site of action. NADES-AHD has enhanced the EO yield as compared to the conventional method. The EO obtained with water showed promising toxicity against target pests and target site of action. Therefore, based on field and greenhouse bio-efficacy experiments, EOs/biopesticides/botanicals can be proposed for controlling the spread of mealy bugs and aphids.