Currently, the energy demand at a global level is accelerated, and the use of non-renewable energies increases the problems related to global warming. Solar technologies, mainly photovoltaics, have been used as an alternative, but conversion efficiency is still low. Hybrid generation systems, which integrate photovoltaic and thermoelectric technologies, seek to provide a solution to efficiency and high costs per area unit. These systems need high tracking precision to concentrate solar energy, which requires robotic tracking systems, which generate energy waste due to the tracking action. The studies and developments do not contemplate in their analysis the losses due to tracking or the precision required by the optical concentration element. The present research develops a novel methodology for the design of optimized hybrid energy harvesting systems, integrating the concentrated photovoltaic and thermoelectric generator technologies and including the effects of solar tracking in the energy sense. In addition, a process for the numerical evaluation of hybrid systems is presented, considering thermal and tracking simulations to estimate the global energy balance. Consequently, the design methodology and numerical evaluation are implemented, comparing three concentration configurations. Additionally, a focus control device is designed for a high concentration index and evaluated. The mean total electrical efficiency of the hybrid system is 40.6763%, 38.84%, 13.3439%, and 35.0484%, respectively. With global gain estimates of 189.48 Wh, 201.83 Wh, 47.43 Wh, and 141.91 Wh. Finally, the results are compared with other developments, concluding that the hybrid system has high energy production. In conclusion, the proposal increases the overall performance of hybrid energy harvesting systems, allowing the development of future research regarding novel concentration devices, cooling methods, harvesting systems, and absorbing designs, among other innovations in more realistic energy evaluation terms.