Trachinotus Ovatus Research Articles

Integrated Transcriptomics and Metabolomics Reveal Changes in Cell Homeostasis and Energy Metabolism in Trachinotus ovatus in Response to Acute Hypoxic Stress.

Trachinotus ovatus is an economically important mariculture fish, and hypoxia has become a critical threat to this hypoxia-sensitive species. However, the molecular adaptation mechanism of T. ovatus liver to hypoxia remains unclear. In this study, we investigated the effects of acute hypoxic stress (1.5 ± 0.1 mg·L-1 for 6 h) and re-oxygenation (5.8 ± 0.3 mg·L-1 for 12 h) in T. ovatus liver at both the transcriptomic and metabolic levels to elucidate hypoxia adaptation mechanism. Integrated transcriptomics and metabolomics analyses identified 36 genes and seven metabolites as key molecules that were highly related to signal transduction, cell growth and death, carbohydrate metabolism, amino acid metabolism, and lipid metabolism, and all played key roles in hypoxia adaptation. Of these, the hub genes FOS and JUN were pivotal hypoxia adaptation biomarkers for regulating cell growth and death. During hypoxia, up-regulation of GADD45B and CDKN1A genes induced cell cycle arrest. Enhancing intrinsic and extrinsic pathways in combination with glutathione metabolism triggered apoptosis; meanwhile, anti-apoptosis mechanism was activated after hypoxia. Expression of genes related to glycolysis, gluconeogenesis, amino acid metabolism, fat mobilization, and fatty acid biosynthesis were up-regulated after acute hypoxic stress, promoting energy supply. After re-oxygenation for 12 h, continuous apoptosis favored cellular function and tissue repair. Shifting from anaerobic metabolism (glycolysis) during hypoxia to aerobic metabolism (fatty acid β-oxidation and TCA cycle) after re-oxygenation was an important energy metabolism adaptation mechanism. Hypoxia 6 h was a critical period for metabolism alteration and cellular homeostasis, and re-oxygenation intervention should be implemented in a timely way. This study thoroughly examined the molecular response mechanism of T. ovatus under acute hypoxic stress, which contributes to the molecular breeding of hypoxia-tolerant cultivars.

Whole-genome sequencing of a protease-producing strain isolated from fermented golden pompano and molecular docking of the protease to fish proteins

In fermented fish products, microorganisms catalyze protein degradation by secreting proteases, thereby altering the nutritional values of foods. In this study, we isolated a high proteinase-producing strain from fermented golden pompano (Trachinotus ovatus), and from the 16S rRNA, we identified the strain as Bacillus tropicus, which we named Bacillus tropicus MX-8. This strain could form a distinct proteolytic circle around the colony when plated on agar containing 3% skimmed milk powder and could grow under 0–5% salinity. Its protease significantly degraded fish proteins. Genome sequencing analysis revealed that the genome of B. tropicus MX-8 comprised one circular chromosome and three circular plasmids. A total of 27 genes encoding proteases, including a neutral protease and three serine proteases, were identified in the non-redundant protein database. Homology modeling showed that serine protease 2 had the best model quality and the highest sequence match. Molecular docking experiments revealed the presence of several amino acid active sites on serine protease 2. These active sites mainly rely on hydrogen bonding to interact with actin heavy chains and myosin to form complexes, which can promote further protein degradation. This study demonstrated that B. tropicus MX-8 has the potential to ferment fish, providing a theoretical basis for the production of rapidly fermented fish products.

Effects of Sodium Acetate Supplementation on Growth, Hematologic and Plasma Biochemical Parameter, Lipid Deposition, and Intestinal Health of Juvenile Golden Pompano Trachinotus ovatus Fed High‐Lipid Diets

Experimental diets were formulated including the suitable lipid level (10%, PC), the high‐lipid level (16%, HL), and HL containing sodium acetate diets (HS). Three diets were fed golden pompano (Trachinotus ovatus) (initial body weight: 12.88 ± 0.03 g) for 8 weeks. The results showed HL diets significantly increased hepatosomatic index (HSI) and abdominal fat percentage (ASF), aggravated liver lipid deposition, and caused blood metabolic disorder and liver damage (P < 0.05). Moreover, the fish fed HL diets significantly decreased intestinal villus number (VN) and muscular layer thickness (MLT) (P < 0.05), accompanied with an increased trend in the relative abundance of intestinal pathogenic bacteria such as Mycoplasma and Photobacterium. However, the fish fed HS diets significantly decreased the HSI and AFP, relieved hepatic lipid deposition, improved blood and liver metabolism, and intestinal morphology in comparison to the fish fed HL diets (P < 0.05). More importantly, sodium acetate addition improved intestinal microbiota by inhibiting the proportion of pathogens (Mycoplasma and Vibrio) and increasing the abundance of probiotics (Bacteroidales_S24-7_group_norank, Cetobacterium, Bacteroides, and Lachnospiraceae_NK4A136_group). Furthermore, there was a strong correlation between these bacteria (Mycoplasma, Vibrio, Lachnospiraceae_NK4A136_group, Bacteroidales_S24-7_group_norank, Bacteroides, and Cetobacterium) and main physiological indices. In conclusion, sodium acetate improved blood performance, alleviated hepatic lipid deposition induced by HL diets, and boosted the growth and intestinal health for golden pompano.

Genome-wide characterization, phylogenetic and expression analysis of Galectin gene family in Golden pompano Trachinotus ovatus.

Galectins (Gals) are a type of S-type lectin that are widespread and evolutionarily conserved among metazoans, and can act as pattern recognition receptors (PRRs) to recognize pathogen-associated molecular patterns (PAMPs). In this study, 10 Gals (ToGals) were identified in the Golden pompano (Trachinotus ovatus), and their conserved domains, motifs, and collinearity relationships were analyzed. The expression of ToGals was regulated following infection to Cryptocaryon irritans and Streptococcus agalactiae, indicating that ToGals participate in immune responses against microbial pathogens. Further analysis was conducted on one important member, Galectin-3, subcellular localization showing that ToGal-3like protein is expressed both in the nucleus and cytoplasm. Recombinant protein obtained through prokaryotic expression showed that rToGal-3like can agglutinate red blood cells of rabbit, carp and golden pompano and also agglutinate and kill Staphylococcus aureus, Bacillus subtilis, Vibrio vulnificus, S. agalactiae, Pseudomonas aeruginosa, and Aeromonas hydrophila. This study lays the foundation for further research on the immune roles of Gals in teleosts.

Novel identification of mixed infection of Lactococcus garvieae and Cryptocaryon irritans isolated from cultured Trachinotus ovatus in China.

Lactococcus garvieae has recently been identified and listed as one of the causative agents of hyperacute hemorrhagic sepsis in fish. In intensive recirculating aquaculture systems where there are high fish densities and minimal water changes, not only will it be conducive to the growth of bacteria, but Cryptocaryon irritans as a marine protozoan fish parasite is also prone to appear. This study reports the disease status of Trachinotus ovatus in an aquaculture area in Yangjiang City, Guangdong Province. Through the diagnosis of clinical symptoms of the diseased fish, identification of specific primers, 16s rRNA sequences phylogenetic tree analysis, physiological and biochemical identification, and observation of histopathological sections, the result of the experiment is that the mass death of T. ovatus is caused by a mixture of L. garvieae and C. irritants infections. Subsequently, regression infection experiments were performed to verify Koch's law. It was confirmed that the pathogen had strong virulence to T. ovatus. This is the first time that the co-infection of L. garvieae and C. irritans to T. ovatus was found in South China. The research results of this experiment have certain enlightenment significance for the epidemic trend of fish diseases in relevant sea areas.

Dietary Effects of Fermented Cottonseed Meal Substituting Fishmeal on the Growth, Biochemical Indexes, Antioxidant Capacity, and Muscle Quality of Juvenile Golden Pompano (Trachinotus ovatus)

This study investigated the effects of the dietary replacing fishmeal (FM) with fermented cottonseed meal (FCSM) on growth performance, body coloration, serum biochemistry, muscle quality, and liver antioxidant capacity of juvenile golden pompano (Trachinotus ovatus). Fish were fed with five experimental diets (0 (FM), 12.5% (CSM12.5), 25% (CSM25), 50% (CSM50), and 100% (CSM100) replacement levels) for 8 weeks. The weight gain rate (WGR), specific growth rate (SGR), and condition factor (CF) in fish fed with CSM25 were significantly higher than those of the FM (P < 0.05). ALT, GLU, TG, TC, and LDL of fish fed with CSM100 diet were significantly higher than those in FM (P < 0.05). No significant difference was observed in SOD, CAT, and MDA among all treatments (P > 0.05). The relative gene expression of Nrf2 of fish fed with CSM25 diet was higher than that of the other groups (P < 0.05). The relative gene expression of Keap-1 of fish fed with CSM25 diet was lower than those in FM (P < 0.05). In addition, the replacement of a high proportion of FM with FCSM negatively affect the liver antioxidant capacity of fish. With dietary replacement of FM with FCSM increasing 0%–25%, the relative expressions of GH, myf5, and MSTN were significantly upregulated (P > 0.05). Based on these results, we recommend that of FCSM in the diet of golden pompano, whereas the optimal level of FCSM should be carefully evaluated. In conclusion, the optimum level of dietary replacing FM with FCSM in T. ovatus diet was 24.74%−29.38% based on SGR and WGR.

Molecular characteristics and functional analysis of non-specific cytotoxic cell receptor (NCCRP1) in golden pompano (Trachinotus ovatus)

Non-specific cytotoxic cells (NCCs) are cytotoxic cell population found in innate immune system of teleost, playing crucial role in immune defense. Non-specific cytotoxic cell receptor protein 1 (NCCRP1) is responsible for recognizing target cells and activating NCCs. That said, since the studies regarding NCCs’ role in fish during pathogen infection are few, it is necessary to conduct more comprehensive studies. In this study, we identified NCCRP1 from Trachinotus ovatus (ToNCCRP1). The open reading frame of ToNCCRP1 was found to be 702 bp, encoding a protein of 233 amino acids. Additionally, ToNCCRP1 contained a conserved F-box-associated domain and exhibited more than 61 % similarity to NCCRP1 in other fish species. Quantitative real-time PCR analysis showed that ToNCCRP1 mRNA was generally expressed in all tissues, with the highest level expressed in the liver. Furthermore, the expression of ToNCCRP1 was significantly upregulated following infection with Streptococcus iniae. In vitro experiments demonstrated that recombinant ToNCCRP1 possessed bacterial agglutination and binding capabilities, suggesting its antibacterial function. Additionally, we investigated the immune response of head kidney leukocytes (HKLs) to ToNCCRP1. The challenge experiments revealed that ToNCCRP1 played a role in the immune response by influencing the inflammatory response, regulating signaling pathways and apoptosis in HKLs. These findings suggest that NCCRP1 is involved in the immune defense against pathogenic infections in golden pompano, providing insights into the immune mechanisms of teleost.

Genome-wide identification of heat shock protein gene family and their responses to pathogen challenge in Trachinotus ovatus

Heat Shock Proteins (HSPs) are a widely distributed family of proteins produced in response to heat and other stresses. To develop a deeper understanding of the mechanisms governing expression of HSPs in the bony fish Trachinotus ovatus, we carried out a whole genome analysis and identified 43 HSP genes. Based on their phylogenetic relationships with Danio rerio, Seriola dumerili, and Seriola lalandi, they were divided into four subfamilies: HSP20, HSP60, HSP70, and HSP90. We performed an analysis of the predicted physicochemical properties and subcellular localization of proteins encoded by these genes. The chromosomal localization results showed that the HSP genes are distributed across 20 chromosomes of T. ovatus.These genes were found to be expressed in different tissues, and they showed differential expression in the immune response against Streptococcus agalactiae. However, there was no significant differential expression in the different skin tissue locations of T. ovatus after infection by Cryptocaryon irritans Brown. This study provides basic information for further research on the evolution and structure and function of HSPs in teleosts.

Discovery of characteristic proteins linked to textural changes in fermented golden pompano (Trachinotus ovatus) based on a label-free proteomics strategy

Fermentation causes changes in fish texture, nevertheless, the mechanism of protein involvement in this process of textural changes are unknown. We investigated changes in the tissue microstructure and texture, combined with a multidimensional fusion strategy to characterized the oxidative degradation properties of myofibrillar proteins, and analyzed the protein expression using label-free quantitative proteomics. Muscle protein hydrolysis, increased oxidation levels, and changes in spatial conformation were observed in the fish texture and microstructure during fermentation. We identified 664 proteins and screened 330 differentially proteins. The weighted protein co-expression network model screening yielded a total of 38 key potential proteins associated with textural changes. Characteristic proteins at important nodes, which were mainly structural proteins and metabolic enzymes, were identified using protein-protein interaction network analysis. These results reveal a relationship between proteins and textural characteristics and provide a theoretical basis for improving the quality control of fermented marine fish.

Evaluation of the green development efficiency of marine fish culture in China

Green development efficiency (GDE) is an important criterion for measuring the level of green development. GDE considers not only economic development efficiency but also environmental costs. In China, marine fish culture, as one of the pillar industries of mariculture, promotes green development and industrial transformation and upgradation. Based on data from the field surveys of marine fish farmers (2017–2019) and the China Fishery Statistical Yearbook (2018–2020), this study establishes an evaluation index system and uses the super-slack-based measure model (Super-SBM) to evaluate the GDE of marine fish culture. The results show that the average GDE of marine fish culture in China was 0.9529, which was in an inefficient state. As for culture species, golden pompano (Trachinotus ovatus) and cobia (Rachycentron canadum) were the two species farmed in an efficient state, with a GDE of 1.2107 and 1.0659, respectively. Regarding culture modes, green modes (offshore cage aquaculture, industrial recirculating aquaculture, and engineering pond aquaculture) were in an efficient state, with a GDE of 1.2310, 1.0827, and 1.0401, respectively. Traditional modes (industrial flow-through aquaculture, ordinary cage aquaculture, and ordinary pond aquaculture) were in an inefficient state, with their GDE being 0.9884, 0.8746, and 0.8248, respectively. Green modes have higher GDE than traditional modes. In contrast, the production and culture areas of green modes were less than those of traditional modes because the profits of the same species in green modes were lower than those in traditional modes. The results of this study present an objective assessment of the GDE of marine fish culture in China and provide valuable insights for analyzing the mechanisms to improve the GDE of marine fish culture.

Comparative genomics analysis of Streptococcus iniae isolated from Trachinotus ovatus: novel insight into antimicrobial resistance and virulence differentiation

BackgroundStreptococcus iniae is an important fish pathogen that cause significant economic losses to the global aquaculture industry every year. Although there have some reports on the genotype of S.iniae and its relationship with virulence, no genome-scale comparative analysis has been performed so far. In our previous work, we characterized 17 isolates of S.iniae from Trachinotus ovatus and divided them into two genotypes using RAPD and rep-PCR methods. Among them, BH15-2 was classified as designated genotype A (in RAPD) and genotype 1 (in rep-PCR), while BH16-24 was classified as genotype B and genotype 2. Herein, we compared the differences in growth, drug resistance, virulence, and genome between BH15-2 and BH16-24.ResultsThe results showed that the growth ability of BH16-24 was significantly faster than that of BH15-2 at the exponential stage. Antimicrobial tests revealed that BH15-2 was susceptible to most of the tested antibiotics except neomycin and gentamycin. In contrast, BH16-24 was resistant to 7 antibiotics including penicillin, sulfasomizole, compound sulfamethoxazole tablets, polymyxin B, spectinomycin, rifampin and ceftazidime. Intraperitoneal challenge of T.ovatus, showed that the LD50 value of BH15-2 was 4.0 × 102 CFU/g, while that of BH16-24 was 1.2 × 105 CFU/g. The genome of S.iniae BH15-2 was 2,175,659 bp with a GC content of 36.80%. Meanwhile, the genome of BH16-24 was 2,153,918 bp with a GC content of 36.83%. Comparative genome analysis indicated that compared with BH15-2, BH16-24 genome had a large-scale genomic inversion fragment, at the location from 502,513 bp to 1,788,813 bp, resulting in many of virulence and resistance genes differentially expression. In addition, there was a 46 kb length, intact phage sequence in BH15-2 genome, which was absent in BH16-24.ConclusionComparative genomic studies of BH15-2 and BH16-24 showed that the main difference is a 1.28 Mbp inversion fragment. The inversion fragment may lead to abnormal expression of drug resistant and virulence genes, which is believed to be the main reason for the multiple resistance and weakened virulence of BH16-24. Our study revealed the potential mechanisms in underlying the differences of multidrug resistance and virulence among different genotypes of S.iniae.

Comparative survey of coordinated regulation of hypothalamic–pituitary–somatotropic axis in golden pompano (Trachinotus ovatus) and humpback grouper (Cromileptes altivelis)

Hypothalamic–Pituitary–Somatotropic (HPS) axis is the essential endocrine system playing important roles in animal growth. Here, the HPS axis were characterized in golden pompano (Trachinotus ovatus) and humpback grouper (Cromileptes altivelis), two marine cultured tropical teleosts representing fast and slow growth patterns, respectively. Through genomic and transcriptomic survey, 32 and 35 HPS genes were characterized in T. ovatus and C. altivelis. Functional domain and phylogeny revealed their conserved function among teleost lineages, with more ssts and igfbps identified and actively expressed in C. altivelis than in T. ovatus. The regulation of HPS genes responding to external stimuli revealed that T. ovatus HPS genes, including gh, igf1/2, igfbp1a/b, igfbp2b and igfbp5b, were differentially expressed under temperature or starvation challenges, while C. altivelis HPS genes were sensitive to salinity change with sst1.2, ghrhrb, igf1, igf2r, igfbp1a and igfbp5a regulated in brains. Strong interactive connectivity of igfbps was found in both T. ovatus and C. altivelis. Moreover, HPS genes evolved differently between T. ovatus and C. altivelis, and positively selected sites were detected in more C. altivelis HPS genes, like in functional domains of igf1ra and igf1rb. The igf1ra evolved faster than igf1rb in teleosts, which may contribute to their functional divergence. In conclusion, this study represented different regulatory and evolutionary patterns of HPS axis between T. ovatus and C. altivelis, which are vital in regulating their growth and will provide comprehensive insights into the cultivation of T. ovatus and C. altivelis in aquaculture.

The male and female genomes of golden pompano (Trachinotus ovatus) provide insights into the sex chromosome evolution and rapid growth

IntroductionGolden pompano (Trachinotus ovatus) is economically significant important for offshore cage aquaculture in China and Southeast Asian countries. Lack of high-quality genomic data and accurate gene annotations greatly restricts its genetic breeding progress. ObjectivesTo decode the mechanisms of sex determination and rapid growth in golden pompano and facilitate the sex- and growth-aimed genetic breeding. MethodsGenome assemblies of male and female golden pompano were generated using Illumina, PacBio, BioNano, genetic maps and Hi-C sequencing data. Genomic comparisons, whole genome re-sequencing of 202 F1 individuals, QTL mapping and gonadal transcriptomes were used to analyze the sex determining region, sex chromosome evolution, SNP loci, and growth candidate genes. Zebrafish model was used to investigate the functions of growth candidate gene. ResultsFemale (644.45 Mb) and male (652.12 Mb) genomes of golden pompano were assembled and annotated at the chromosome level. Both genomes are highly conserved and no new or highly differentiated sex chromosomes occur. A 3.5 Mb sex determining region on LG15 was identified, where Hsd17b1, Micall2 and Lmx1a were putative candidates for sex determination. Three SNP loci significantly linked to growth were pinpointed, and a growth-linked gene gpsstr1 was identified by locus BSNP1369 (G → C, 17489695, Chr23). Loss of sstr1a (homologue of gpsstr1) in zebrafish caused growth retardation. ConclusionThis study provides insights into sex chromosome evolution, sex determination and rapid growth of golden pompano.

Effects of Dietary Mannan Oligosaccharides on Growth, Nonspecific Immunity and Tolerance to Salinity Stress and Streptococcus iniae Challenge in Golden Pompano, Trachinotus ovatus

The effects of dietary supplementation with mannan oligosaccharide (MOS) on growth performance, haematological parameters, abundance of intestinal Vibrio spp., immune response, and tolerance to low salinity stress and Streptococcus iniae challenge were evaluated in pompano (Trachinotus ovatus). Pompano (3.24 ± 0.45 g) were fed six diets including a basal diet as control, and the basal diets supplemented with 0.1%, 0.2%, 0.4%, 0.6%, or 0.8% MOSs for 8 weeks. The results showed that pompano fed 0.1%–0.4% MOS had significantly improved specific growth rates ( P ≤ 0.039 ). Dietary MOS did not affect the survival rate of pompano ( P = 0.192 ). WBC count was significantly higher in fish fed diets containing 0.1%–0.6% MOS. Dietary MOS increased lymphocytes count ( P ≤ 0.042 ) and reduced monocytes and basophils counts ( P ≤ 0.019 ); however, no effects were found on neutrophils and eosinophil numbers ( P ≥ 0.064 ). Intestinal Vibrio spp. counts reduced in fish fed diets containing 0.1%–0.4% MOS ( P ≤ 0.035 ). The phagocytic ratio significantly increased in pompano fed diets containing 0.1%–0.6% MOS ( P ≤ 0.015 ), while the phagocytic index and serum lysozyme activity in fish fed 0.1%–0.4% MOS were significantly higher than the control ( P ≤ 0.035 ). There were significant positive correlations between MOS levels and fish growth on days 14, 28, 42, and 56 ( P ≤ 0.049 ). In addition, dietary MOS levels were highly correlated with blood parameters, abundance of intestinal Vibrio spp., and immune responses. Optimal dietary MOS requirements for maximal growth were estimated to be 0.440% on day 21 (R2 = 0.861), 0.385% on day 28 (R2 = 0.877), 0.371% on day 42 (R2 = 0.891), and 0.365% on day 56 (R2 = 0.750), showing decreasing tendency in MOS requirement as fish size increased. Furthermore, the optimal MOS concentration for maximal immunity based on lysozyme activity was estimated to be 0.431% (R2 = 0.817) on day 56. In addition, fish fed 0.1%–0.4% MOS showed better resistance to low salinity stress and Streptococcus iniae challenges ( P ≤ 0.014 ). In conclusion, MOS supplementation effectively reduced the prevalence of intestinal Vibrio spp. and enhanced the growth, immune responses, and tolerance to low salinity stress and Streptococcus iniae in juvenile pompano.

Effects of partial replacement of fish meal with black soldier fly (Hermetia illucens) larvae meal on growth performance, lipid metabolism and hepatointestinal health of juvenile golden pompano (Trachinotus ovatus)

This experiment was conducted to investigate the effects of partial replacement of fish meal with black soldier fly larvae (BSFL) meal on growth performance, body and muscle nutrients, lipid metabolism, intestinal morphology and microbiota of juvenile golden pompano (Trachinotus ovatus). Three isolipidic (12.40 ± 0.29%) and isoproteinic (42.98 ± 0.02%) experimental diets were formulated to feed golden pompano by replacing 0% (BSFL0), 25% (BSFL25) and 50% (BSFL50) of fish meal with BSFL meal. The experiment lasted for a total of 8 weeks. The results showed that compared with BSFL0, BSFL25 could significantly increase feed intake of golden pompano (P < 0.05). However, BSFL50 significantly reduced growth performance (P < 0.05). The hepatosomatic index, body and muscle crude fat in BSFL25 and BSFL50 decreased. BSFL25 could significantly reduce the activity of fatty acid synthase (FAS) and significantly enhance the activity of lipase (LPS) (P < 0.05). Both BSFL25 and BSFL50 could significantly reduce the number and volume of lipid droplets in the liver, but BSFL50 could damage the intestinal morphology and shorten the intestinal villi. Compared with BSFL0, the richness (Chao1, ACE, Sobs) and diversity (Shannon and Simpson) of intestinal microbiota in BSFL25 and BSFL50 were increased, and the abundance of Proteobacteria, Actinobacteria and Bacteroidetes was increased. In conclusion, the replacement of 25% fish meal in the feed by BSFL meal improved the food intake, lipid deposition in the liver, and intestinal microbiota balance of golden pompano, and had no harmful effects on growth and intestinal health. However, when the substitution level reached 50%, it would have a negative impact on growth and intestinal health.

Molecular cloning of estrogen receptor and its function on vitellogenesis in pompano (Trachinotus ovatus)

Estrogen receptors (ERs) play a critical role in vitellogenesis (Vtgs). However, the contribution of each ER for the regulation of vtgs expression was not analyzed clearly in teleosts. In the present study, three ers isoforms (erα, erβ1, and erβ2) were cloned in pompano (Trachinotus ovatus). Real-time PCR and enzyme-linked immunosorbent assay (ELISA) was used to detect the effects of 17β-estradiol (E2) on ERs and Vtgs in the liver of pompano. In vivo injection experiments showed that E2 significantly increased the expressions of ers and vtgs. ER broad spectrum antagonist Fulvestrant significantly attenuated the E2- induced up-regulation of ers and vtgs in a dose-dependent manner. ERα antagonist Methyl-piperidino pyrazole (MPP) significantly attenuated the up-regulation of erα, erβ2, vtg-B and vtg-C, and promoted the expressions of erβ1 and vtg-A. ERβ antagonist Cyclofenil significantly inhibited the expressions of erβ1, erβ2, vtg-A and vtg-C, and promoted the expressions of erα and vtg-B. In addition, E2 significantly increased the protein level of Vtg, while Fulvestrant, MPP and Cyclofenil significantly inhibited the protein level of Vtg in a dose-dependent manner. Our results indicate that E2 may regulate the expression of each vtg with different subtypes of ERs, and shows a distinct compensatory expression effect on the regulation for ers and vtgs, which provides a theoretical basis for reproductive endocrinology study in pompano.

Differences in Physiological Performance and Gut Microbiota between Deep-Sea and Coastal Aquaculture of Thachinotus Ovatus: A Metagenomic Approach.

Aquaculture has become the fastest growing sector in global agriculture. The environmental degradation, diseases, and high density of mariculture has made for an inevitable shift in mariculture production from coastal to deep-sea areas. The influence that traditional coastal and emerging deep-sea farming environments exert on aquatic growth, immunity and gut microbial flora is unclear. To address this question, we compared the growth performance, physiological indicators and intestinal microbiological differences of deep-sea and coastal aquaculture in the Guangxi Beibu Gulf of China. The results showed that the growth performance and the complement of C3 and C4 (C3, C4), superoxide dismutase (SOD), and lysozyme (LYS), these physiological and biochemical indicators in the liver, kidney, and muscle of Trachinotus ovatus (T. ovatus), showed significant differences under different rearing conditions. Metagenome sequencing analysis showed Ascomycota, Pseudomonadota, and Bacillota were the three dominant phyla, accounting for 52.98/53.32 (coastal/deep sea), 24.30/22.13, and 10.39/11.82%, respectively. Aligned against the CARD database, a total of 23/2 (coastal/deep-sea) antibiotic resistance genes were screened and grouped into 4/2 genotypes. It indicated that compared with deep-sea fish, higher biological oxygen levels (3.10 times), inorganic nitrogen (110.00 times) and labile phosphate levels (29.00 times) in coastal waters might contributed to the existence of eutrophication with antibiotic resistance. The results of the study can provide complementary data on the study of the difference between deep-sea farming and traditional coastal farming, serving as a reference to future in-depth work on the transformation of fisheries development and scientific standardization of deep-sea farming.

Establishment and characterization of a muscle cell line from golden pompano (Trachinotus ovatus) and its application in viral susceptibility

A new cell line, golden pompano muscle (GPM), was developed and characterized from the muscle tissue of the golden pompano in this work. GPM cells were mostly fibroblast-like and proliferated well in Leibovitz's L-15 medium supplemented with fetal bovine serum (FBS) (concentration of 10% to 20%) at 28 °C. The cell line has been stably passed over 80 generations and has been successfully cryopreserved. Molecular characterization of cytochrome oxidase subunit I (COI) confirmed that the GPM cells used in this study were from the golden pompano. Chromosome analysis showed that the diploid chromosome number of GPM cells was 2 N = 48. The enhanced green fluorescent protein (EGFP) reporter gene was successfully expressed in the GPM cell line by liposome transfection technique, and the transfection efficiency of GPM cells was about 60%, which suggests that GPM cells are available for research on gene expression in vitro. Virus susceptibility assay showed that GPM cells were susceptible to red-spotted grouper nervous necrosis virus (RGNNV), evidenced by the occurrence of cytopathic effect (CPE) and the increased viral protein synthesis capacity. Furthermore, viral replication significantly increased the expression levels of interferon (IFN) related signaling molecules and pro-inflammatory cytokines in cells. Therefore, our work developed and characterized a new cell line from golden pompano muscle, which allowed for functional studies of genetic manipulation, viral pathogenesis, and the interactions of host and virus.

Transcriptome analysis of the allometric growth of golden pompano (Trachinotus ovatus) following soybean meal feed

Golden pompano (Trachinotus ovatus) is a marine fish of great commercial value. It was selected for a study on allometric growth using fermented soybean meal (SBM) as the primary protein source during an 8-week culture period. By comparing the gene expression levels of different individuals in the fermented soybean meal group, we discovered that 1026 genes exhibited significant changes in slow and fast-growth individuals. Among these genes, 358 showed high expression levels, while 668 showed low ones. Subsequently, we conducted go function annotation and KEGG pathway enrichment analysis on all the significantly differentially expressed genes. This analysis revealed that many of these genes were associated with oxidative phosphorylation, steroid biosynthesis, glyceride metabolism, alanine, aspartic acid, and glutamate metabolism. Identifying these differentially expressed genes is a foundation for unraveling the molecular mechanisms behind growth and development. Additionally, it provides valuable gene data for future studies on the cloning and expression of growth-related genes and offers insights for subsequent biological research.

Astaxanthin-enriched Oedocladium sp. improves liver health by enhancing fatty acid oxidation and suppressing inflammation in Trachinotus ovatus that was fed a high-fat diet

A high-fat diet can lead to fat deposition in the liver. Astaxanthin is reported to exert a hepatoprotective effect by affecting host fat metabolism. However, the molecular mechanism used by astaxanthin to regulate fat metabolism is still unclear. This study aimed to examine the function and molecular mechanism used by astaxanthin-enriched Oedocladium sp. in attenuating liver damage and fat deposition that was caused by a high-fat diet. The normal-fat diet (NF), high-fat diet (HF), and high-fat diet supplemented with Oedocladium sp. (HFO) were used to feed juvenile Trachinotus ovatus for 8 weeks. The findings of this study indicated that the HFO diet mitigated growth decline caused by the HF diet by improving digestibility and feed utilization. Meanwhile, the HFO diet reduced serum cholesterol and triglycerides as well as hepatic fat accumulation, alleviating inflammation, oxidative stress, and immunosuppression caused by an HF diet. Additionally, the HFO diet activated AMPK/ACC/CPT1 signal and suppressed the AMPK/SREBP1/FAS signal to promote the catabolism and transport of fat molecules and inhibit fat synthesis. This was regarded as an important regulatory mechanism that was used by Oedocladium sp. to alleviate the fat deposition induced by an HF diet. AMPK may be a key target for Oedocladium sp. to regulate fat metabolism. Therefore, Oedocladium sp., a promising source of astaxanthin, can be used in HF diets to enhance the health and productivity of farmed fish.