In this paper, we report on an investigation of the vertical transport of tracer particles released within a shallow, continuously-forced flow by means of numerical simulations. The investigation is motivated by the shallow flows encountered in many environmental situations and inspired by the laboratory experiments conducted in electromagnetically forced shallow fluid layers. The flow is confined to a thin fluid layer by stress-free top and no-slip bottom walls. The dynamics and the transport properties of the shallow flow are investigated under various flow conditions characterized by a Reynolds number related to the forcing, ReF, and the aspect ratio of vertical and horizontal length scales δ. The forcing generates an array of vortices that becomes unsteady when ReFδ2≳10. These vortices are accompanied by upwellings in their cores which are surrounded by narrower, stronger downwellings. Hence, upwellings occur where the horizontal flow is vorticity-dominated, while downwellings where it is strain-dominated. The magnitude of the asymmetry in strength and size of the vertical flows and their correlation with horizontal structures depends on the flow conditions and significantly influences the vertical spreading of particles within the fluid volume. Under conditions leading to a large asymmetry, particles within updrafts are transported slowly upwards, while particles within downdrafts rapidly move downwards. In addition, particles are trapped for longer within the updrafts than downdrafts because of their correlation with vorticity-dominated regions. However, when the flow becomes fully three-dimensional and highly unsteady for large ReFδ2 values, this transport asymmetry subsides because the updrafts and downdrafts exhibit similar strength and size in such flow conditions. Consequently, similar amounts of particles are transported upwards and downwards at similar rates.