This paper utilises the system dynamics theory to develop a simulation model of the agricultural and agricultural product logistics system in Sichuan Province. The coordinated development policy of the agricultural and agricultural product logistics in Sichuan Province is analysed through simulation by adjusting the proportions of investment in the logistics industry, logistics information technology, and agricultural financial input. The study suggests that enhancing investments in logistics industry and logistics information technology leads to an accelerated development in the agricultural product logistics sector, ultimately promoting coordination between the agricultural economy and agricultural product logistics. Moreover, lowering agricultural financial input can lead to more rational allocation and utilization of resources, hence further advancing the coordinated growth of agriculture and agricultural product logistics.