This study identifies gastrointestinal parasites in the feces of Pecari tajacu (caititu) and Sus scrofa domesticus (domestic pig) in southeastern Piauí, Brazil. The region covers 2 protected areas, Serra da Capivara National Park and Serra das Confusões National Park, and surrounding communities. Fecal samples from 64 animals, 42 from domestic swine and 22 from caititu, collected between 1985 and 2013, were analyzed by optical microscopy. Helminths and/or protozoa were found in 64% of the domestic pig samples and 27% of the caititu samples, totaling 18 morphospecies: Nematoda, Spirurida (2 morphospecies), Trichostrongyloidea, Eimeriidae, Aspidodera sp., Bertiella sp., Metastrongylus sp., Trichostrongylus sp., Moniezia sp., Gongylonema sp., Trichuris suis, Spirocerca lupi, Macracanthorhyncus hirudinaceus, Globocephalus urosubulatus, Strongyloides cf ransomi, Balantioides coli, and Eimeria cf scabra. The highest parasite diversity was obtained in the pig samples, totaling 15 morphospecies, compared to only 6 in caititus, with S. cf ransomi, G. urosubulatus, and S. lupi present in both hosts. We discuss the presence of parasites associated with domestic animals around the Protected Areas and potentially zoonotic parasites close to human communities, which raise concerns about the conservation of wildlife, human health, and livestock in the region.