Tan Spot Of Wheat Research Articles

Identification of quantitative trait loci for race-nonspecific resistance to tan spot in wheat

Tan spot, caused by Pyrenophora tritici-repentis (Ptr), is an economically important foliar disease in the major wheat growing areas throughout the world. Multiple races of the pathogen have been characterized based on their ability to cause necrosis and/or chlorosis on differential wheat lines. In this research, we evaluated a population of recombinant inbred lines derived from a cross between the common wheat varieties Grandin and BR34 for reaction to tan spot caused by Ptr races 1-3 and 5. Composite interval mapping revealed QTLs on the short arm of chromosome 1B and the long arm of chromosome 3B that were significantly associated with resistance to all four races. The effects of the two QTLs varied for the different races. The 1B QTL explained from 13% to 29% of the phenotypic variation, whereas the 3B QTL explained from 13% to 41% of the variation. Additional minor QTLs were detected but not associated with resistance to all races. The host-selective toxin Ptr ToxA, which is produced by races 1 and 2, was not a significant factor in the development of disease in this population. The race-nonspecific resistance derived from BR34 may take precedence over the gene-for-gene interaction known to be associated with the wheat-Ptr system.

Epidemiology of Foliar Blights (Spot Blotch and Tan Spot) of Wheat in the Plains Bordering the Himalayas

ABSTRACT Helminthosporium leaf blight (HLB), a complex of spot blotch caused by Cochliobolus sativus and of tan spot caused by Pyrenophora tritici-repentis, is a major wheat disease in South Asia. This 2-year study elucidated HLB development and its impact on yield. Symptoms caused by C. sativus and P. tritici-repentis were first observed at the seedling and tillering stages, respectively. The number of airborne conidia and leaves infected by the two pathogens remained low for several weeks under lower temperatures, followed by a sharp rise as temperatures increased. The number of airborne conidia of C. sativus and incidence of infection by C. sativus were higher compared with P. tritici-repentis. The disease complex caused an average 30% reduction in yield, with greater losses under delayed seeding. Delayed seeding increased disease severity even in resistant genotypes and caused higher yield losses. 'Milan/Shanghai-7' was the most resistant among six genotypes evaluated. Despite higher disease severity, 'BL 1473' showed relatively lower yield losses, indicating its tolerance to foliar blight. The findings of this study bear implications for integrated foliar blight management in the warmer areas of South Asia by combining optimum seeding date, seed treatment and foliar spray of fungicides, and resistant wheat genotypes.

Cultivar Mixtures for the Simultaneous Management of Multiple Diseases: Tan Spot and Leaf Rust of Wheat

ABSTRACT Because of differences in life histories between Puccinia triticina, a highly specialized, polycyclic, windborne pathogen with a shallow dispersal gradient, and Pyrenophora tritici-repentis, a residue-borne pathogen with a steep dispersal gradient, wheat mixtures are expected to be more effective at controlling leaf rust than tan spot. The objectives of this research were to determine the effect of two-cultivar mixtures with varying proportions and different pathogen resistance profiles on the severity of tan spot and leaf rust, to evaluate yield of the mixtures in the presence or absence of disease, and to directly compare the relative effectiveness of cultivar mixing for tan spot versus leaf rust. In a field experiment at two sites in Kansas over two growing seasons, winter wheat cvs. Jagger and 2145, which have differential resistance reactions to leaf rust and tan spot, each were planted in proportions of 0.25, 0.50, 0.75, and 1.00. Plots were inoculated with each pathogen alone, both pathogens, treated with a fungicide, or exposed to ambient conditions. For both diseases for all siteyears, severity decreased substantially on the susceptible cultivar as the proportion of that cultivar decreased in mixture. Mixtures were significantly more effective at reducing leaf rust than tan spot in three of four site-years. Mixtures generally yielded the same as the weighted mean of components in monoculture although, in two of three site-years, at least one fungicide-treated and one diseased mixture each yielded higher than expected values. Although this particular mixture produced only modest yield benefits, the potential for simultaneous reductions in tan spot and leaf rust was demonstrated.

Genomic Targeting and High‐Resolution Mapping of the Tsn1 Gene in Wheat

Tan spot, caused by the fungal pathogen Pyrenophora tritici‐repentis (Died.) Drechs. causes severe yield losses in wheat (Triticum aestivum L., 2n = 6x = 42, AABBDD) and durum (T. turgidum L., 2n = 4x = 28, AABB). The Tsn1 gene acts dominantly to confer sensitivity to a host‐selective proteinaceous toxin (Ptr ToxA) produced by the fungus. Our objectives were to: (i) target markers to the Tsn1 genomic region and (ii) develop a high‐resolution map of the Tsn1 locus. The techniques of methylation‐sensitive AFLP, traditional AFLP, and cDNA‐AFLP were combined with bulked segregant analysis (BSA) using various wheat and durum cytogenetic stocks to target markers to the Tsn1 genomic region. Over 500 primer combinations were screened resulting in the identification of 18 low‐copy markers closely linked to Tsn1. High‐resolution mapping of the markers delineated the Tsn1 gene to a 0.2 cM interval in a hexaploid wheat population consisting of 1266 gametes, and to 0.8 cM in a durum wheat population consisting of 1860 gametes. Comparisons with rice BAC/PAC sequences indicated the lack of colinearity within the Tsn1 genomic region. Tsn1 was located within a gene‐rich recombination hot spot region, and the physical distance separating the flanking markers may be as little as 200 kb. Therefore, these markers will serve as a basis for the map‐based cloning of Tsn1 The isolation of Tsn1 will further our knowledge of wheat–tan spot interactions as well as host–pathogen interactions in general.

Prospects for exploitation of disease resistance from Hordeum chilense in cultivated cereals.

Hordeum chilense is a South American wild barley with high potential for cereal breeding given its high crossability with other members of the Triticeae. In the present paper we consider the resistance of H. chilense to several fungal diseases and the prospects for its transference to cultivated cereals. All H. chilense accessions studied are resistant to the barley, wheat and rye brown rusts, the powdery mildews of wheat, barley, rye and oat, to Septoria leaf blotch, common bunt and to loose smuts, which suggests that H. chilense is a non-host of these diseases. There are also lines resistant to wheat and barley yellow rust, stem rust and to Agropyron leaf rust, as well as lines giving moderate levels of resistance to Septoria glume blotch, tan spot and Fusarium head blight. Some H. chilense lines display pre-appressorial avoidance to brown rust. Lines differ in the degree of haustorium formation by rust and mildew fungi they permit, and in the degree to which a hypersensitive response occurs after haustoria are formed. Unfortunately, resistance of H. chilense to rust fungi is not expressed in tritordeum hybrids, nor in chromosome addition lines in wheat. In tritordeum, H. chilense contributes quantitative resistance to wheat powdery mildew, tan spot and loose smut. The resistance to mildew, expressed as a reduced disease severity, is not associated with macroscopically visible necrosis. Hexaploid tritordeums are immune to Septoria leaf blotch and to common bunt although resistance to both is slightly diluted in octoploid tritordeums. Studies with addition lines in wheat indicate that the resistance of H. chilense to powdery mildew, Septoria leaf blotch and common bunt is of broad genetic basis, conferred by genes present on various chromosomes.

Genomic Targeting and High-Resolution Mapping of the Gene in Wheat

Tan spot, caused by the fungal pathogen Pyrenophora tritici-repentis (Died.) Drechs. causes severe yield losses in wheat (Triticum aestivum L., 2n = 6x = 42, AABBDD) and durum (T. turgidum L., 2n = 4x = 28, AABB). The Tsn1 gene acts dominantly to confer sensitivity to a host-selective proteinaceous toxin (Ptr ToxA) produced by the fungus. Our objectives were to: (i) target markers to the Tsn1 genomic region and (ii) develop a high-resolution map of the Tsn1 locus. The techniques of methylation-sensitive AFLP, traditional AFLP, and cDNA-AFLP were combined with bulked segregant analysis (BSA) using various wheat and durum cytogenetic stocks to target markers to the Tsn1 genomic region. Over 500 primer combinations were screened resulting in the identification of 18 low-copy markers closely linked to Tsn1. High-resolution mapping of the markers delineated the Tsn1 gene to a 0.2 cM interval in a hexaploid wheat population consisting of 1266 gametes, and to 0.8 cM in a durum wheat population consisting of 1860 gametes. Comparisons with rice BAC/PAC sequences indicated the lack of colinearity within the Tsn1 genomic region. Tsn1 was located within a gene-rich recombination hot spot region, and the physical distance separating the flanking markers may be as little as 200 kb. Therefore, these markers will serve as a basis for the map-based cloning of Tsn1 The isolation of Tsn1 will further our knowledge of wheat–tan spot interactions as well as host–pathogen interactions in general.

Host–parasite interactions in tan spot [Pyrenophora tritici-repentis] of wheat

Tan spot of wheat, caused by the ascomycete Pyrenophora tritici-repentis, is an economically important disease in all the major wheat growing areas worldwide. Even though the pathogen was known to occur on grasses and episodically on wheat for more than eight decades, large-scale epidemics of tan spot were first recorded in the early 1970s. The increased incidence was associated with stubble retention, a practice implemented in the context of soil conservation. The present review highlights some of the recent developments that have occurred in studies of the wheat - P. tritici-repentis interaction and discusses the implications for our understanding of host-parasite relations in general. Races of P. tritici-repentis produce at least three host-specific toxins, effective on particular host lines or cultivars. Single dominant and independently inherited genes control host reaction to these toxins, with one gene for each toxin. Eight races of the pathogen have now been identified from collections made in several parts of the world, accounting for all virulence patterns expected from three toxins matching three "susceptibility" genes in the host. Genetic analyses of host and pathogen suggested that a one-to-one relationship existed in the wheat - P. tritici-repentis interaction. The model described for tan spot of wheat appears to be a mirror image of the classical gene-for-gene in that it is based on compatibility. Thus, it is proposed that the gene-for-gene model can be extended, as previously predicted by others, to pathosystems involving multiple host-specific toxins. The relationship between toxin production and the evolution of new races is also discussed.

The Identification of Two New Races ofPyrenophora tritici-repentisfrom the Host Center of Diversity Confirms a One-to-One Relationship in Tan Spot of Wheat

ABSTRACT Pyrenophora tritici-repentis, causal agent of tan spot, induces necrosis and chlorosis in its wheat host. The tan spot system conforms to the toxin model and three host-specific toxins have been identified (Ptr ToxA, Ptr ToxB, and putative Ptr ToxC). Processing of a collection of isolates, obtained in the Fertile Crescent and Caucasus regions, yielded two new virulence patterns. Isolate Az35-5 combined the virulences of races 2 and 5 and was classified in the new race 7. Isolates TS93-71B and TS93-71F had a virulence pattern that combined those of races 2, 3, and 5 and were grouped in the new race 8. Southern analysis revealed that all three isolates possessed copies of the ToxA and ToxB genes, the first time the genes were found in a common background. The production of Ptr ToxA and Ptr ToxB by the isolates was confirmed by western blotting. Virulence patterns suggested that TS93-71B and TS93-71F may also produce Ptr ToxC, even though it was not present at detectable levels in culture filtrates. The identification of races 7 and 8 complete the theoretical maximum number of races that can be differentiated by three loci in the host (2(3) = 8), assuming a one-to-one relationship. It appears that the wheat/P. tritici-repentis system is a mirror image of the classical gene-for-gene relationship.

Role of Host Sensitivity to Ptr ToxA in Development of Tan Spot of Wheat

ABSTRACT Pyrenophora tritici-repentis race 2 produces Ptr ToxA, a host-selective toxin previously described as a pathogenicity factor for tan spot on wheat. The objective of this research was to evaluate the role of host sensitivity to toxin, conditioned by a single dominant gene on chromosome 5BL, in the disease development by race 2. An F(2)-derived F(6) recombinant inbred population of 108 wheat lines, produced from crosses of toxin-sensitive, disease-susceptible cv. Kulm with the toxin-insensitive, disease-resistant cv. Erik segregated 1:1 for toxin reaction. However, the population was skewed toward resistance to race 2 of the fungus. Toxin reaction accounted for 24.4% of the genetic variance for disease. Heritability estimates suggested the presence of four to five genes that influence disease reaction in the population. Toxin-insensitive mutants, previously derived Kulm, were susceptible to race 2, although disease developed more slowly on the mutants than it did on the wild-type Kulm. The data indicate that sensitivity to Ptr ToxA influences disease severity in some host genotypes without defining susceptibility.

First Report of Tan Spot of Wheat Caused by Pyrenophora tritici-repentis in the Pacific Northwest.

In late May 2001, lesions resembling tan spot were observed on lower leaves of winter wheat (Triticum aestivum L.) in early boot stage in Nez Perce County, ID. Abundant sporulation was observed from tan lesions with chlorotic haloes after 2 days incubation in a moist chamber at room temperature. Conidia were multicelled, straw colored, approximately 100 × 15 µm, rounded at the apex, and borne singly on dark brown conidiophores. The fungus fit the morphological description of Drechslera tritici-repentis (Died.) Shoemaker, the anamorphic state of Pyrenophora tritici-repentis (Died.) Drechs. (2). Three single-conidial isolates were sampled from infected plants in a 5 × 1 m area of the affected field and induced to sporulate. Two of the isolates were used to spray-inoculate 3-week-old susceptible wheat (cv. Madsen) in the greenhouse (one plant per isolate, 1 × 105 conidia/ml), and tan spot lesions were apparent 3 to 5 days after inoculation with both isolates. DNA was extracted from all three isolates, and the entire nuclear ribosomal internal transcribed spacer (ITS) was amplified with ITS1 and ITS4 primers (4). Similarly, 610 bp of the 5' end of the glyceraldehyde-3-phosphate-dehydrogenase gene (gpd) was amplified with gpd-1 and gpd-2 primers (1). ITS and gpd amplicons were direct-sequenced on both strands, and alignment revealed that all three isolates were identical for both regions. A BLAST search of the NCBI database with the ITS sequence revealed P. tritici-repentis accessions AY004808 and AF071348 and D. tritici-repentis accession AF163060 as the closest matches with 100, 99.8, and 98.8% sequence similarity, respectively. A similar search with the gpd sequence revealed P. tritici-repentis accessions AY004838 and AF081370 and P. bromi accession AY004839 as the closest matches with 100, 100, and 99.0% sequence similarity, respectively. These results, coupled with the morphological identification and inoculation results, confirm the identity of the fungus as P. tritici-repentis. Although reported on other grass hosts in the region (3), to our knowledge, this is the first report of tan spot of wheat in the Pacific Northwest. This disease has been of little concern to wheat producers in the Pacific Northwest due to low rainfall and relative humidity during the growing season.

Tan spot of wheat ( Triticum aestivum L.) infection at different stages of crop development and inoculum type

The incidence, severity and progress of tan spot ( Pyrenophora tritici-repentis) of wheat under different inoculum types were analysed during 2000 and 2001 in two different environments of Buenos Aires Province. Severity, incidence and area under the disease progress curve (AUDPC) were higher in 2001 than in 2000. Inoculum as spore pulverization treatments of Drechslera tritici-repentis occasioned higher disease severity than the application of oat grains colonized with the pathogen at low or high inoculum concentration. Severities increased with the growth stage of wheat plants. In both environments severity was higher when the evaluation was performed at 14 days compared to 7 days after inoculation. The combined analysis for incidence and severity showed significant differences between all main factors and the interactions except the quadruple for incidence and environment×evaluation date and environment×growth stage×evaluation date for severity. For the AUDPC all main factors and interactions were significant except environment×evaluation date. Due to the significant interactions with the environment both years were analysed separately. For the separate analysis, incidence, severity and AUDPC increased with the growth stage and evaluation date in both years. The severity and AUDPC increased for the spore pulverization treatment with respect to oat grain application. For incidence there were differences between both treatments only in 2000 environment. Furthermore, the highest rate of spore pulverization caused a higher severity and AUDPC than the lowest rate. However, there were no differences for incidence between doses.

The Influence of the Application of Mineral Fertilizers with the Biopreparation Supresivit ( Trichoderma Harzianum ) on the Health and the Yield of Different Crops

The biopreparation Supresivit based on spores from the fungus Trichoderma harzianum was applied as a dressing mixed with mineral fertilizers: NPK, LAV (ammonium nitrate with limestone) and DASA (ammonium nitrate and ammonium sulphate). Our experimental plots with spring barley, winter wheat, winter oil rape, maize and potatoes were fertilized with the mixtures of the biopreparation (1 g, 0.5 g and 0.1 g per 1 kg of fertilizer). There were two check variants, the first variant without any fertilization and without biopreparation, the second with fertilizer and without biopreparation. We observed the infestation of plants with pathogenic fungi and yield parameters. In our experiments it was indicated that Trichoderma harzianum suppresses pathogenic fungi at the concentration 0,5 g of Supresivit per 1 kg of the fertilizer and higher ones. The plants from treated plots had lower infestation - decreasing about 5-15% superficial infestation: tan spot of barley - yellow leaf spot on cereals and leaf blotch of barley, winter wheat - leaf spot of wheat, tan spot of wheat, take-all etc., winter oil-seed rape - black leg and collar rot, potatoes - blight fungus etc. Simultaneously the effect on higher yields was observed.

Controle da ferrugem da folha e da mancha bronzeada da folha de trigo pelo uso de fungicidas em tratamento de sementes

The control of leaf rust and tan spot of wheat by seed treatment with fungicides was evaluated during 1998 in Passo Fundo, RS. Except for treatments including triadimenol and iprodione, leaf rust and tan spot severity in above ground parts of wheat plants was drastically reduced by the fluquinconazole fungicide used.

Neural Network Classification of Tan Spot and Stagonospora Blotch Infection Periods in a Wheat Field Environment

ABSTRACT Tan spot and Stagonospora blotch of hard red spring wheat served as a model system for evaluating disease forecasts by artificial neural networks. Pathogen infection periods on susceptible wheat plants were measured in the field from 1993 to 1998, and incidence data were merged with 24-h summaries of accumulated growing degree days, temperature, relative humidity, precipitation, and leaf wetness duration. The resulting data set of 202 discrete periods was randomly assigned to 10 modeldevelopment or -validation (n = 50) data sets. Backpropagation neural networks, general regression neural networks, logistic regression, and parametric and nonparametric methods of discriminant analysis were chosen for comparison. Mean validation classification of tan spot incidence was between 71% for logistic regression and 76% for backpropagation models. No significant difference was found between methods of modeling tan spot infection periods. Mean validation prediction accuracy of Stagonospora blotch incidence was 86 and 81% for backpropagation and logistic regression, respectively. Prediction accuracies of other modeling methods were </=78% and were significantly different (P = 0.01) from backpropagation, but not logistic regression, results. The best backpropagation models of tan spot and Stagonospora blotch incidences correctly classified 82 and 84% of validation cases, respectively. High classification accuracy and consistently good performance demonstrate the applicability of neural network technology to plant disease forecasting.

Advances in the Characterization of the Pyrenophora tritici-repentis—Wheat Interaction

ABSTRACT Tan spot of wheat, caused by the fungus Pyrenophora tritici-repentis, is a destructive disease found in wheat-growing regions worldwide that can lead to serious yield losses. Changes in cultural practices have led to an increase in the severity and incidence of tan spot. Following infection, compatible races of the fungus elicit two distinct symptoms in differential wheat lines: tan necrosis and (extensive) chlorosis. Tan necrosis has been clearly demonstrated by several groups to result from the action of a protein toxin, Ptr ToxA. Wheat sensitivity to this toxin is conditioned by a single dominant gene. The chlorosis response may be more complex and appears to involve at least two other toxins, Ptr ToxB and Ptr ToxC, produced by different races of the fungus. Distinct genes apparently condition the reaction of wheat lines to each of these chlorosis-inducing toxins. This review concentrates on significant advances that have occurred during the past decade in the characterization of this disease interaction, ranging from the epidemiology and management of tan spot to molecular host-parasite interactions. Particular emphasis is placed on work describing fungal race differentiation, production of toxins and their importance in pathogenicity, and the genetics and physiology of host response to infection.

Molecular aspects of host-pathogen interactions in tan spot of wheat

Molecular aspects of host-pathogen interactions in tan spot of wheat

The Population Genetics of Fungi: Tools and Techniques

Over the last 10 years plant pathologists have begun to realize that more knowledge about the genetic structure of populations of plant pathogens is needed to implement effective control strategies (48). Research on the genetic structure of fungal populations has mushroomed, and review papers that summarize these studies are numerous (7,27,33,34,38). Although the number of fungal studies has increased greatly, the most comprehensive work has focused on a small number of plant-pathogenic fungi. The majority of these fungi can be recognized easily by their fruiting bodies or disease symptoms on aboveground plant parts. It has proven more difficult to assess the genetic structure of fungal populations that exist mainly belowground, because the distribution of individuals cannot be visualized directly and appropriate sampling procedures are less obvious and more cumbersome. Nevertheless, substantial progress has been made in interpreting the population genetic structure of some soilborne fungi (1,17). The purpose of this paper is to provide an overview of the tools and techniques of fungal population genetics. I will try to emphasize approaches that may be applied to studies of soilborne fungi. Instead of providing detailed methods, I will cite recent references where appropriate. There are many opinions regarding which techniques and tools are best suited to studies of fungal populations. I will give a personal and biased viewpoint, which I believe will be most useful to those who are just entering the field.

A Single Gene Encodes a Selective Toxin Causal to the Development of Tan Spot of Wheat

A Single Gene Encodes a Selective Toxin Causal to the Development of Tan Spot of Wheat

Neural Networks That Distinguish Infection Periods of Wheat Tan Spot in an Outdoor Environment

ABSTRACT Tan spot of wheat, caused by Pyrenophora tritici-repentis, provided a model system for testing disease forecasts based on an artificial neural network. Infection periods for P. tritici-repentis on susceptible wheat cultivars were identified from a bioassay system that correlated tan spot incidence with crop growth stage and 24-h summaries of environmental data, including temperature, relative humidity, wind speed, wind direction, solar radiation, precipitation, and flat-plate resistance-type wetness sensors. The resulting data set consisted of 97 discrete periods, of which 32 were reserved for validation analysis. Neural networks with zero to nine processing elements were evaluated 20 times each to identify the model that most accurately predicted an infection event. The 200 models averaged 74 to 77% accuracy, depending on the number of processing elements and random initialization of coefficients. The most accurate model had five processing elements and correctly predicted 87% of the infection periods in the validation set. In comparison, stepwise logistic regression correctly predicted 69% of the validation cases, and multivariate discriminant analysis distinguished 50% of the validation cases. When wetness-sensor inputs were withheld from the models, both the neural network and logistic regression models declined 6% in prediction accuracy. Thus, neural networks were more accurate than statistical procedures, both with and without wetness-sensor inputs. These results demonstrate the applicability of neural networks to plant disease forecasting.

Additional Sources of Resistance to Tan Spot of Wheat

Tan spot, a foliar disease of wheat (Triticum aestivum L. em Thell) and durum (T. turgidum var. durum L.) caused by Pyrenophora triticirepentis (Died.) Drechs., reduces yield in susceptible cultivars by 3 to 50%. Additional sources for resistance to tan spot were sought in germplasm consisting of a collection of spring wheats previously screened for reaction to spot blotch [Cochliobolus sativus (Ito &amp; Kurib.) Drech. ex Dastur] in Brazil, wheat cultivars recommended for cultivation in the state of Paraná, Brazil, and a collection of synthetic hexaploid wheats. Plants from each of the three groups were inoculated at the seedling stage with a composite of four fungal isolates and at the adult stage with one of the four isolates. A subset of germplasm was treated at the seedling stage with necrosis toxin, crude extract, and conidia produced by P. tritici‐repentis isolate 86‐124. Adult disease reactions did not always agree with seedling evaluations and some of the variation could be explained by sensitivity or a mixed reaction to necrosis toxin. Assay with purified necrosis toxin was a reliable way to detect a major factor involved in resistance. This work identifies diverse germplasm available for incorporation of tan spot resistance into cultivated wheats.