When operating water recirculating systems (RAS) with high make-up water flushing rates in locations that have low alkalinity in the raw water, such as Norway, knowledge about the required RAS alkalinity concentration is important. Flushing RAS with make-up water containing low alkalinity washes out valuable base added to the RAS (as bicarbonate, hydroxide, or carbonate), which increases farm operating costs when high alkalinity concentrations are maintained; however, alkalinity must not be so low that it interferes with nitrification or pH stability. For these reasons, a study was designed to evaluate the effects of alkalinity on biofilter performance, and CO2 stripping during cascade aeration, within two replicate semi-commercial scale Atlantic salmon smolt RAS operated with moving bed biological filters. Alkalinity treatments of nominal 10, 70, and 200mg/L as CaCO3 were maintained using a pH controller and chemical dosing pumps supplying sodium bicarbonate (NaHCO3). Each of the three treatments was replicated three times in each RAS. Both RAS were operated at each treatment level for 2 weeks; water quality sampling was conducted at the end of the second week. A constant feeding of 23kg/day/RAS was provided every 1–2h, and continuous lighting, which minimized diurnal fluctuations in water quality. RAS hydraulic retention time and water temperature were 4.3 days and 12.5±0.5°C, respectively, typical of smolt production RAS in Norway.It was found that a low nominal alkalinity (10mg/L as CaCO3) led to a significantly higher steady-state TAN concentration, compared to when 70 or 200mg/L alkalinity was used. The mean areal nitrification rate was higher at the lowest alkalinity; however, the mean TAN removal efficiency across the MBBR was not significantly affected by alkalinity treatment. The CO2 stripping efficiency showed only a tendency towards higher efficiency at the lowest alkalinity. In contrast, the relative fraction of total inorganic carbon that was removed from the RAS during CO2 stripping was much higher at a low alkalinity (10mg/L) compared to the higher alkalinities (70 and 200mg/L as CaCO3). Despite this, when calculating the total loss of inorganic carbon from RAS, it was found that the daily loss was about equal at 10, and 70mg/L, whereas it was highest at 200mg/L alkalinity. pH recordings demonstrated that the 10mg/L alkalinity treatment resulted in the lowest system pH, the largest increase in [H+] across the fish culture tanks, as well as giving little response time in case of alkalinity dosing malfunction. Rapid pH changes under the relatively acidic conditions at 10mg/L alkalinity may ultimately create fish health issues due to e.g. CO2 or if aluminium or other metals are present. In conclusion, Atlantic salmon smolt producers using soft water make-up sources should aim for 70mg/L alkalinity considering the relatively low loss of inorganic carbon compared to 200mg/L alkalinity, and the increased pH stability as well as reduced TAN concentration, compared to lower alkalinity concentrations.