Tail Model Research Articles

플라즈마 공정을 이용한 고추역병균(Phytophthora capsici) 불활성화 모델의 적용

Ten empirical disinfection models for the plasma process were used to find an optimum model. The variation of model parameters in each model according to the operating conditions (first voltage, second voltage, air flow rate, pH, incubation water concentration) were investigated in order to explain the disinfection model. In this experiment, the DBD (dielectric barrier discharge) plasma reactor was used to inactivate Phytophthora capsici which cause wilt in tomato plantation. Optimum disinfection models were chosen among ten models by the application of statistical SSE (sum of squared error), RMSE (root mean sum of squared error), r 2 values on the experimental data using the GInaFiT software in Microsoft Excel. The optimum models were shown as Log-linear+Tail model, Double Weibull model and Biphasic model. Three models were applied to the experimental data according to the variation of the operating conditions. In Log-linear+Tail model, Log10(No), Log10(Nres) and kmax values were examined. In Double Weibull model, Log10(No), Log10(Nres), α, δ1, δ2, p values were calculated and examined. In Biphasic model, Log10(No), f, kmax1 and kmax2 values were used. The appropriate model parameters for the calculation of optimum operating conditions were kmax, α, kmax1 at each model, respectively.

Liposomal fusidic acid as a potential delivery system: a new paradigm in the treatment of chronic plaque psoriasis

Chronic plaque psoriasis is an inflammatory skin disease affecting 2–3% of the world population. With increasing understanding of the progress of disease and its causes, bacterial infection is reported to be one of the potential reasons. In this regard, fusidic acid (FA), a steroidal antibiotic, has been a drug of choice which could play an important role by virtue of its unique mechanism of action. Despite many topical formulations of FA in practice, drug-delivery issues like permeability in the prevailing infectious conditions and stability of the drug are yet the challenges not been covered so far from the formulation development perspective. For these issues, liposomes, on account of their carrier-specific properties, have been suggested as delivery tools to fulfill the expectations. In the present work, FA liposomes (FA-LP) were prepared and characterized for its varied traits such as size (420–740 nm), surface charge, morphology, percent skin permeation (>75%), and retention (1.620 ± 0.8 mg/cm2). Confocal laser scanning microscope (CLSM) images revealed appreciable cell-uptake of fluorescent dye-loaded liposomes. In stability, FA-LP proved to be stable with respect to drug leakage and vesicle size. In vivo studies using the mouse tail model, FA-LP, are found significantly better (p < 0.05) vis-à-vis conventional one with improved efficacy in and around the target site by the carrier-effect. Hence, the work suggests for the possibility of a better FA liposome-based formulation as a potential option in addressing the infectious challenges of psoriasis.

The Structural Basis of Actin Organization by Vinculin and Metavinculin

Vinculin is an essential adhesion protein that links membrane-bound integrin and cadherin receptors through their intracellular binding partners to filamentous actin, facilitating mechanotransduction. Here we present an 8.5-Å-resolution cryo-electron microscopy reconstruction and pseudo-atomic model of the vinculin tail (Vt) domain bound to F-actin. Upon actin engagement, the N-terminal “strap” and helix 1 are displaced from the Vt helical bundle to mediate actin bundling. We find that an analogous conformational change also occurs in the H1′ helix of the tail domain of metavinculin (MVt) upon actin binding, a muscle-specific splice isoform that suppresses actin bundling by Vt. These data support a model in which metavinculin tunes the actin bundling activity of vinculin in a tissue-specific manner, providing a mechanistic framework for understanding metavinculin mutations associated with hereditary cardiomyopathies.

Modeling of the dust tail of comet C/2012 S1 (ISON) from the results of observations

The results of the dynamic modeling of the process, that formed the dust tail of comet C/2012 S1 (ISON), are presented. The images of the comet were acquired with the 1-meter Zeiss-1000 telescope of the Special Astrophysical Observatory of the Russian Academy of Sciences (SAO RAS). To construct the model of the dust tail, the trajectories of 50 million dust particles were traced. The distribution of brightness in the dust tail of the comet was reproduced in the model. According to our model investigations, the observed tail could be formed by dust particles with the sizes ranging from 0.5 to 16.6 µm and the escape velocities from 17 to 130 m/s; the power exponent of the distribution by radius is–2.5, and the maximum age of the dust particles having formed the cometary tail is 25 days. In the paper, the brightness of the comet at the moment of observations is also estimated, and the morphology of the cometary coma is analyzed with the use of digital filters.

Histomorphometry of the newly formed bone after its growth modulation by static and dynamic compression using a rat tail model

Histomorphometry of the newly formed bone after its growth modulation by static and dynamic compression using a rat tail model

Efficient methodology for the probabilistic safety assessment of high-speed railway bridges

The efficiency of different probabilistic methodologies for the safety assessment of short span railway bridges is compared in the current paper. Two different simulation methods, namely the Monte Carlo and the Latin Hypercube, are combined with two different procedures to enhance the efficiency of the assessment. One of the methods is a tail modelling approach based on the extreme value theory that uses the Generalized Pareto Distribution to model the tail of the obtained distribution. The other one is an Enhanced Simulation procedure which uses an approximation procedure based on the estimates of the failure probabilities at moderate levels for the prediction of the far tail failure probabilities by extrapolation. A composite bridge with six simply supported spans of 12m and ballasted track is selected as case study for the crossing of the TGV-double high-speed train. The variability of parameters related to the bridge, the track and the train is taken into account along with the existence of track irregularities. The running safety of trains due to loss of contact between the wheel and the rail and the track instability due to excessive deck vibrations are the two safety criteria analyzed, providing examples of limit state functions with different degrees of complexity. The obtained results are extremely promising and indicate the feasibility of the application of this type of methodology in common practice due to the very reasonable computational costs that are required.

Microemulsions mediated effective delivery of methotrexate hydrogel: more than a tour de force in psoriasis therapeutics

Methotrexate (MTX), a well known drug for the treatment of cancer and rheumatoid arthritis, has gained prominence in the treatment of psoriasis over the period of years. However, the present mode of systemic administration through oral or parenteral route has always proposition, full of compromises. The toxicity of drug to the vital organs and physiological environment is the major concern. Also, its poor skin penetration is one major problem. Hence novel system based on lipid carriers has been considered here to overcome the barriers. Microemulsions (MEs) were prepared using pseudo-ternary phase diagram (PTPD) and they were characterized for various parameters such as size, shape (cryo-SEM), PDI, zeta potential, etc. The chosen MEs system (optimized) was then incorporated into secondary vehicles and characterized for rheological behavior, texture profile analysis, in vitro release, ex vivo permeation and drug distribution into different layers of skin. The developed formulations were further evaluated in ex vivo and in vivo such as cell line study, imiquimod-induced psoriatic model, allergic contact dermatitis, rat tail model (% orthokeratosis) and safety test (Draize test). The MEs based MTX gel has shown its potential in locating the drug at the desired domain of stratum corneum, epidermal and dermal layers of skin and reducing systemic absorption. Our results are suggestive of MEs potential as a novel carrier for topical delivery of MTX in topical therapeutic and safety approaches. In conclusion, developed MEs-based hydrogel has shown promising results in achieving effective delivery of MTX.

Modelling survival behaviour of Salmonella enterica ser. Enteritidis, Typhimurium and Tennessee on table eggs during storage at different temperatures

Quantitative risk assessment studies on the health risk of Salmonella due to consumption of contaminated table eggs are based on the assumption that Salmonella is inside the egg and that the pathogen belongs to serovar Enteritidis. However different serovars of Salmonella may contaminate the surface of table eggs and spread to other foods at consumer's kitchen due to improper food handling. In the present study the survival behaviour of one strain each from Salmonella enterica serovars Enteritidis, Typhimurium and Tennessee on table egg surface during storage at 4, 8, and 20 °C have been described. Besides, in those cases observed data were subjected for modelling; linear, log-linear tail and Weibull models were compared in terms of model fitting and model performance. Overall, in most cases, inactivation kinetics presented a linear trend on Salmonella behaviour so that Weibull and linear models adequately described observed data. Regarding log-linear tail models, though they presented a better fitting, their adequacy could not be assessed given the lack of data in the tail region. Regarding storage temperatures, 4 °C was predicted to be the most inhibitory temperature for table eggs externally contaminated by a strain of S. enterica serovar Enteritidis. After 28 days of storage, a reduction of 4 log10 cfu/g of eggshell on the S. enterica ser. Enteritidis load was registered at 4 °C. S. enterica ser. Typhimurium and Tennessee showed higher survival rates at all tested temperatures. The results highlighted the importance of keeping constant the storage temperature of table eggs in order to reduce the risk of S. enterica ser. Enteritidis contaminating the surface of table eggs. However this temperature might not be the optimal one in view of S. enterica serovars other than Enteritidis.

In Vivo Total Disc Replacement using Tissue-Engineered Intervertebral Discs in a Canine Model

Introduction Disc degeneration in the cervical spine is a prevalent clinical predicament often requiring surgery. Anterior cervical decompression and fusion (ACDF), the most commonly performed procedure, poses risks of pseudoarthrosis, and adjacent segment disease (ASD).1,2 An emerging alternative treatment option is prosthetic total disc replacement (TDR),3 which preserves segmental mobility. Our group previously developed a biological TDR device using composite AF/NP disc-like construct with viable cells and mechanical properties analogous to the native discs in a rat tail model.4 In this study, we evaluated the in vivo efficacy of this tissue-engineered intervertebral disc (TE–IVD) in a beagle cervical model assessing radiological and histological parameters. Material and Methods TE-IVD construction: Canine-sized TE–IVDs were constructed as previously described.4 Cervical IVDs from skeletally mature beagles were separated into AF and NP tissues; component cells were isolated and cultured in vitro. Cultured NP cells were seeded with alginate, injected into a predesigned mold, and encircled with two layers of an AF cell laden collagen gel. The combined construct was kept in media for 2 weeks as the surrounding annulus fibrous aligned and contracted until required TE–IVD diameter was attained. Experimental Protocol: Overall, eight skeletally mature beagles were divided into the following two groups: the control group ( n = 2) underwent discectomy with fully resected IVDs, and the experimental group ( n = 6) underwent TE–IVD implantation postdiscectomy. Adjacent proximal segments served as internal healthy controls. Postoperative X-ray and MRI were taken at 2 and 4 weeks; disc height indices5 and NP hydration using a pre-established algorithm6 were analyzed. Beagles were humanely killed at 4 weeks for histological assessment. Results TE–IVDs were successfully implanted postdiscectomy ( Fig. 1A , B). At 2 weeks, MRIs of TE–IVDs revealed T2 high intensity with acute outer inflammation because of the surgical invasion, which faded by 4 weeks. At 4 weeks, TE–IVDs maintained position in the disc space with relatively increased T2 intensity, whereas discectomized segments manifested as black discs ( Fig. 1C , D). These findings suggest that the implanted TE–IVDs engraft in the disc space despite significant biomechanical demands of the beagle cervical environment. In fact, disc height indices of the TE–IVDs and discectomized discs were 71 and 49%, respectively, of that of healthy control discs. Likewise, MRIs revealed that NP hydration of the implanted TE–IVDs was over 70% of that of healthy discs. Histological assessments further demonstrated chondrocyte-like cell viability in the TE–IVD, abundant proteoglycan content in the extracellular matrices, and substantial integration into host tissues without signs of immune reactions. [Figure: see text] Conclusion Despite the severe local milieu of the beagle cervical spine owing to mechanical loading, our in vivo TE–IVDs when appropriately implanted, maintained their position and structure at 4 weeks. The TE–IVDs displayed dynamic adaptation to the host environment, with extracellular matrix production and cell proliferation. They further maintained disc height as well as NP hydration at 4 weeks with up to 70% viability as the normal healthy discs. References Nesterenko SO, Riley LH III, Skolasky RL. Anterior cervical discectomy and fusion versus cervical disc arthroplasty: current state and trends in treatment for cervical disc pathology. Spine 2012;37(17):1470–1474 Sugawara T, Itoh Y, Hirano Y, Higashiyama N, Mizoi K. Long term outcome and adjacent disc degeneration after anterior cervical discectomy and fusion with titanium cylindrical cages. Acta Neurochir (Wien) 2009;151(4):303–309, discussion 309 Kelly MP, Mok JM, Frisch RF, Tay BK. Adjacent segment motion after anterior cervical discectomy and fusion versus Prodisc-c cervical total disk arthroplasty: analysis from a randomized, controlled trial. Spine 2011;36(15):1171–1179 Bowles RD, Gebhard HH, Härtl R, Bonassar LJ. Tissue-engineered intervertebral discs produce new matrix, maintain disc height, and restore biomechanical function to the rodent spine. Proc Natl Acad Sci U S A 2011;108(32):13106–13111 Kim JS, Kroin JS, Li X, et al. The rat intervertebral disk degeneration pain model: relationships between biological and structural alterations and pain. Arthritis Res Ther 2011;13(5):R165 Grunert P, Hudson KD, Macielak MR, et al. Assessment of intervertebral disc degeneration based on quantitative magnetic resonance imaging analysis: an in vivo study. Spine 2014;39(6):E369–E378

Statistics of Extremes

Statistics of extremes concerns inference for rare events. Often the events have never yet been observed, and their probabilities must therefore be estimated by extrapolation of tail models fitted to available data. Because data concerning the event of interest may be very limited, efficient methods of inference play an important role. This article reviews this domain, emphasizing current research topics. We first sketch the classical theory of extremes for maxima and threshold exceedances of stationary series. We then review multivariate theory, distinguishing asymptotic independence and dependence models, followed by a description of models for spatial and spatiotemporal extreme events. Finally, we discuss inference and describe two applications. Animations illustrate some of the main ideas.

Computer modelling and biomimetics for understanding the evolution of tail grasping in seahorses

Seahorses are intriguing fish, having a prehensile tail. Syngnathid fishes (seahorses, pipefish, seadragons and pipehorses) are characterised by a bony armour of serially articulated plates enclosing the vertebral column and its musculature. Ancestrally, pipefish have a straight tail with limited flexibility, mainly used for steering. During evolution, the tail modified into a grasping apparatus multiple times (also pipehorses show grasping adaptations). Using 3D shape data and computer modelling on a parameterized model of the seahorse tail, we analysed the implications of muscle contractions and plate geometry. Conditions were simulated to mimic natural bending postures of living seahorses, highlighting particular relations between morphology and bending kinematics. Functional implications of evolutionary changes in syngnathid tails are then further analysed using bio-inspired designs of serially articulated systems derived from the seahorse tail.

Regulation of inflammation and fibrosis by macrophages in lymphedema.

Lymphedema, a common complication of cancer treatment, is characterized by inflammation, fibrosis, and adipose deposition. We have previously shown that macrophage infiltration is increased in mouse models of lymphedema. Because macrophages are regulators of lymphangiogenesis and fibrosis, this study aimed to determine the role of these cells in lymphedema using depletion experiments. Matched biopsy specimens of normal and lymphedema tissues were obtained from patients with unilateral upper extremity breast cancer-related lymphedema, and macrophage accumulation was assessed using immunohistochemistry. In addition, we used a mouse tail model of lymphedema to quantify macrophage accumulation and analyze outcomes of conditional macrophage depletion. Histological analysis of clinical lymphedema biopsies revealed significantly increased macrophage infiltration. Similarly, in the mouse tail model, lymphatic injury increased the number of macrophages and favored M2 differentiation. Chronic macrophage depletion using lethally irradiated wild-type mice reconstituted with CD11b-diphtheria toxin receptor mouse bone marrow did not decrease swelling, adipose deposition, or overall inflammation. Macrophage depletion after lymphedema had become established significantly increased fibrosis and accumulation of CD4(+) cells and promoted Th2 differentiation while decreasing lymphatic transport capacity and VEGF-C expression. Our findings suggest that macrophages home to lymphedematous tissues and differentiate into the M2 phenotype. In addition, our findings suggest that macrophages have an antifibrotic role in lymphedema and either directly or indirectly regulate CD4(+) cell accumulation and Th2 differentiation. Finally, our findings suggest that lymphedema-associated macrophages are a major source of VEGF-C and that impaired macrophage responses after lymphatic injury result in decreased lymphatic function.

Receptor binding proteins of Listeria monocytogenes bacteriophages A118 and P35 recognize serovar-specific teichoic acids

Adsorption of a bacteriophage to the host requires recognition of a cell wall-associated receptor by a receptor binding protein (RBP). This recognition is specific, and high affinity binding is essential for efficient virus attachment. The molecular details of phage adsorption to the Gram-positive cell are poorly understood. We present the first description of receptor binding proteins and a tail tip structure for the siphovirus group infecting Listeria monocytogenes. The host-range determining factors in two phages, A118 and P35 specific for L. monocytogenes serovar 1/2 have been determined. Two proteins were identified as RBPs in phage A118. Rhamnose residues in wall teichoic acids represent the binding ligands for both proteins. In phage P35, protein gp16 could be identified as RBP and the role of both rhamnose and N-acetylglucosamine in phage adsorption was confirmed. Immunogold-labeling and transmission electron microscopy allowed the creation of a topological model of the A118 phage tail.

INITIAL SPEED OF KNOTS IN THE PLASMA TAIL OF C/2013 R1(LOVEJOY)

We report short-time variations in the plasma tail of C/2013 R1(Lovejoy). A series of short (two to three minutes) exposure images with the 8.2-m Subaru telescope shows faint details of filaments and their motions over 24 minutes observing duration. We identified rapid movements of two knots in the plasma tail near the nucleus (~ 3 x 10^5 km). Their speeds are 20 and 25 km/s along the tail and 3.8 and 2.2 km/s across it, respectively. These measurements set a constraint on an acceleration model of plasma tail and knots as they set the initial speed just after their formation. We also found a rapid narrowing of the tail. After correcting the motion along the tail, the narrowing speed is estimated to be ~ 8 km/s. These rapid motions suggest the need for high time-resolution studies of comet plasma tails with a large telescope.

The effect of bone morphogenetic protein-2 injection at different time points on intervertebral disk degeneration in a rat tail model.

Prospective in vivo rat tail model of disk degeneration comparing the effects of recombinant human bone morphogenetic protein-2 (rhBMP-2) injection over various time points and grades of degeneration. To evaluate the effect of timing and disk grade on rhBMP-2 injection in a rat tail model of disk degeneration. rhBMP-2 stimulates the proliferation of intervertebral disk cells and the secretion of extracellular matrix. However, few in vivo studies have demonstrated whether rhBMP-2 also improves disk degeneration and the severity of disk degeneration beyond which disks cannot be recovered by rhBMP-2 treatment. Two coccygeal disks of each rodent subject were punctured percutaneously using an 18 G needle. At 4 weeks after the puncture, disks demonstrating induced degeneration were divided into 3 groups. Groups 1, 2, and 3 were treated with 7.5 μg rhBMP-2 or phosphate buffered saline by injection into the disk at 4, 6, and 8 weeks postpuncture, respectively. Plain radiographs and magnetic resonance images (MRIs) were obtained on the day of puncture and every 2 weeks thereafter until sacrifice. At 6 weeks after injection, each group was killed and examined with histologic and immunohistochemical analysis. According to MRI disk grade evaluation of the degenerative disk, rhBMP-2 significantly improved degeneration grade in group 1 at 2 weeks after injection. According to radiographic disk height index, groups 1 and 2 showed a trend toward improvement at 2 weeks after rhBMP-2 injection. Chondrogenic differentiation was noted on immunohistochemical staining of many disks treated with rhBMP-2. rhBMP-2 injection of degenerated disks at 4 weeks postpuncture induced a transient improvement in disk grade on MRI and stimulated chondrogenic differentiation. These data suggest rhBMP-2 as a potential therapy for degenerative disk disease.

Summarising censored survival data using the mean residual life function.

The mean residual life function provides a clear and simple summary of the effect of a treatment or a risk factor in units of time, avoiding hazard ratios or probability scales, which require careful interpretation. Estimation of the mean residual life is complicated by the upper tail of the survival distribution not being observed as, for example, patients may still be alive at the end of the follow-up period. Various approaches have been developed to estimate the mean residual life in the presence of such right censoring. In this work, a novel semi-parametric method that combines existing non-parametric methods and an extreme value tail model is presented, where the limited sample information in the tail (prior to study termination) is used to estimate the upper tail behaviour. This approach will be demonstrated with simulated and real-life examples.

Fat Tail Model for Simulating Test Systems in Multiperiod Unit Commitment

This paper describes the use of Chambers-Mallows-Stuck method for simulating stable random variables in the generation of test systems for economic analysis in power systems. A study that focused on generating test electrical systems through fat tail model for unit commitment problem in electrical power systems is presented. Usually, the instances of test systems in Unit Commitment are generated using normal distribution, but in this work, simulations data are based on a new method. For simulating, we used three original systems to obtain the demand behavior and thermal production costs. The estimation of stable parameters for the simulation of stable random variables was based on three generally accepted methods: (a) regression, (b) quantiles, and (c) maximum likelihood, choosing one that has the best fit of the tails of the distribution. Numerical results illustrate the applicability of the proposed method by solving several unit commitment problems.

Robust linear functional mixed models

In this paper we propose a linear functional model with normal random effects and elliptical errors, thus extending the standard normal models considered previously. The corrected score approach (Nakamura, 1990) is used for parameter estimation and the resulting estimators are shown to be consistent and asymptotically normal. The local influence approach (Cook, 1986) is used for assessing influence of small perturbations on the parameter estimates. A simulation study is presented illustrating the good performance of the proposed approach, including the robustness property for the heavier tail models.

Flutter Optimized Design for a Aircraft Horizontal Tail Base on Optimus Software

Based on the similarity theory, the horizontal tail scale model is designed and manufactured. Subsonic doublet lattice method is used to calculate unsteady aerodynamics, V-g method is used to solve the flutter determinant. Optimus software is used to optimize the thickness of the skin. The constraint condition is the frequency, MAC value and flexibility, and the objective function is flutter dynamic pressure. Flutter velocity of horizontal tail model optimized decreased 6%,and flutter frequency increased greatly. Horizontal tail scale model was test in wind tunnel. The finite element calculate results was very close with wind tunnel results, which verify the correctness of the finite element model and optimization models.

Stochastic Model Output Statistics for Bias Correcting and Downscaling Precipitation Including Extremes

Abstract Precipitation is highly variable in space and time; hence, rain gauge time series generally exhibit additional random small-scale variability compared to area averages. Therefore, differences between daily precipitation statistics simulated by climate models and gauge observations are generally not only caused by model biases, but also by the corresponding scale gap. Classical bias correction methods, in general, cannot bridge this gap; they do not account for small-scale random variability and may produce artifacts. Here, stochastic model output statistics is proposed as a bias correction framework to explicitly account for random small-scale variability. Daily precipitation simulated by a regional climate model (RCM) is employed to predict the probability distribution of local precipitation. The pairwise correspondence between predictor and predictand required for calibration is ensured by driving the RCM with perfect boundary conditions. Wet day probabilities are described by a logistic regression, and precipitation intensities are described by a mixture model consisting of a gamma distribution for moderate precipitation and a generalized Pareto distribution for extremes. The dependence of the model parameters on simulated precipitation is modeled by a vector generalized linear model. The proposed model effectively corrects systematic biases and correctly represents local-scale random variability for most gauges. Additionally, a simplified model is considered that disregards the separate tail model. This computationally efficient model proves to be a feasible alternative for precipitation up to moderately extreme intensities. The approach sets a new framework for bias correction that combines the advantages of weather generators and RCMs.