Notostraca Research Articles

A non‐monophyly of ‘crowned’ Daphnia (Ctenodaphnia) Dybowski et Grochowski, 1895 (Cladocera: Daphniidae): From genomes to morphology

AbstractDaphnia (Crustacea: Cladocera) has been frequently used as a model taxon for studying prey antipredator defences. Among numerous representatives of this genus, there are several taxa within the subgenus Daphnia (Ctenodaphnia) with a morphological innovation unique for these cladocerans, a head plate. In some populations, the margin of this anterior projection of carapace into the head shield is adorned with a remarkable ‘crown of thorns’, which has been shown to be an antipredator adaptation against tadpole shrimps (Notostraca). This structure is phenotypically plastic, dependent on the presence of these omnivorous crustaceans in the respective water bodies. We aimed to evaluate the monophyly of Eurasian ‘crowned’ Daphnia species (i.e., those forming the ‘crown of thorns’ under some circumstance) based on genomic phylogenies and morphology. For this study, we have individually sequenced the genomes of five daphniids, four representing taxa able to form ‘crowns’ (two specimens of different clades of the D. (C.) atkinsoni complex and two specimens of D. (C.) triquetra from distant populations), and D. (C.) mediterranea distantly related to D. (C.) atkinsoni that lacks the head plate. We analysed them along with genomes obtained from GenBank, focusing on either full mitochondrial or partial nuclear datasets (BUSCO). Our main hypothesis on a monophyly of all ‘crowned’ daphnids was rejected. Genomic analyses confirmed existence of two independent lineages able to express this phenotypic trait in the Palaearctic: (1) a monophyletic D. (C.) atkinsoni s. lat. and (2) D. (C.) triquetra, formally redescribed here. These lineages form a well‐supported clade together with several other species lacking a head plate (including D. (C.) mediterranea). Genomic analyses indicate that D. (C.) atkinsoni s. lat. is closely related to D. (C.) tibetana; mitochondrial markers also suggest a close relationship of D. (D.) triquetra with D. (C.) studeri, both D. (C.) tibetana and D. (C.) studeri, are lacking this morphological feature. Molecular clock estimated the time of the differentiation of the major clade containing both ‘crowned Daphnia’ to the Late Mesozoic, confirming an antiquity of the head plate as antipredator defence.

The end of the ‘living fossil’ tale? A new look at Triassic specimens assigned to the tadpole shrimp Triops cancriformis (Notostraca) and associated phyllopods from the Vosges region (eastern France)

AbstractNotostracan branchiopods reported from the Lower Triassic Voltzia Sandstone Lagerstätte in northeastern France have previously been assigned to Triops cancriformis, making this species the longest persisting animal in earth history. Careful restudy of the splendidly preserved material indicates that the species can be well characterized but represents a notostracan genus and species that cannot be assigned to the Triopsidae. This undermines the concept of its being a ‘living fossil’. The name Apudites antiquus, under which the first known specimens were described, is available and appropriate for the species. Some of the specimens of Apudites antiquus offer morphological details of a quality that ranks them among the best‐preserved fossil non‐marine arthropods. The Voltzia Sandstone specimens previously assigned to the extant species T. cancriformis include two additional, peculiar diplostracan branchiopods, Olesenocaris galli gen. et sp. nov. and Grauvogelocaris alsatica gen. et sp. nov., both with unique morphological features that characterize them as representatives of as yet unknown families.

Comparative transcriptomics suggests a potential realizator gene for carapace expansion in longtail tadpole shrimp, Triops longicaudatus (Branchiopoda: Notostraca).

The origin of morphological innovation has been extensively studied within evolutionary developmental biology (evo-devo). Recent studies have demonstrated that the developmental module for double-layered epithelial outgrowths is conserved between the insect wings and branchiopod crustacean carapace, thereby introducing homology among these diverse structures. However, evo-devo studies on the branchiopod crustacean carapace have been primarily limited to a single species, the water flea Daphnia magna, leaving the gene regulatory network governing carapace development not comprehensively understood. Furthermore, realizator genes downstream of the character identity mechanism (ChIM) for bilayered epithelial development remain inadequately described. In this study, we analyzed tissue-specific transcriptional profiles in the developing longtail tadpole shrimp, Triops longicaudatus. We observed significant upregulation of papilin in the carapace-bearing head, along with its expression in both the carapace and the trunk limb lobes. Based on these results, we hypothesize that differential expression of papilin is involved in the disproportional growth of Triops carapace. Our findings will contribute to elucidating the diversification of double-layered epithelial outgrowths across distant arthropod lineages.

Biological Control Options for the Management of Tadpole Shrimp (Triops longicaudatus (LeConte)) in California Rice

Tadpole shrimp (Triops longicaudatus) has become a major pest for California rice farmers. Currently, management relies solely on the insecticide lambda-cyhalothrin. However, resistance to this pyrethroid was confirmed in 2016; thus, identifying an effective and practical biological control method for TPS is a priority. Field trials were conducted from 2017 to 2018 to (1) evaluate the efficacy of the predatory fish Gambusia affinis and the predatory beetles, Laccophilus maculosus (Say) and Tropisternus lateralis (Fabricius), in controlling TPS, (2) test the efficacy of several inoculation rates of Gambusia affinis at controlling TPS and (3) to explore early indicators of TPS activity and damage as monitoring tools. Both Gambusia affinis and the predatory beetle treatments were not significantly different from the commercial standard (lambda-cyhalothrin). Both four and five Gambusia per 1 m2 controlled TPS as well as lambda-cyhalothrin, and we observed that Gambusia affinis was able to reproduce in the field. Water turbidity was significantly correlated with TPS counts (R = 0.85, N = 20, p < 0.0001 (2017); R = 0.58, N = 30, p = 0.0007 (2018)). The number of dislodged seedlings was less reliably correlated with TPS count; in 2017, correlations were significant (R = 0.84, N = 20, p < 0.0001); however, in 2018, correlations were not significant (R = 0.18, N = 30, p = 0.35). With further refinement, water turbidity could play a valuable role in monitoring TPS populations.

Variation in defensive spines across juvenile instars of Daphnia magna

Abstract Various species of freshwater zooplankton feature defensive spines, spikes or spinules across a comparatively wide size range. Among those is Daphnia magna, which has previously been found to express an enhanced spinescence in response to the predatory tadpole shrimp Triops cancriformis. This involves an elongated tail-spine, further protruding fornices and elongated, as well as further spread spinules along its carapace margins. Of these, the predator-induced trait changes concerning the spinules of D. magna at the age of first reproduction are known. However, their morphological development throughout the juvenile instars, in comparison to the changes of the prominent tail spine during the same periods, has thus far been unclear. Our study shows that D. magna expresses spinules across all investigated juvenile instars. Furthermore, during ontogeny, the development of D. magna’s rather small spinescence traits, i.e. the dorsal and ventral mean spinule length, as well as the dorsal spinules bearing area, in response to predation pressure, differs distinctly from that of the prominent tail-spine. Thus, our study provides further insight into the connectedness of traits contributing to the overall defensively enhanced spinescence of D. magna, with possible implications for the functional benefit of the traits at certain developmental periods.

Food quantity and quality modulates inducible defenses in a common predator–prey system

AbstractZooplankton displays different inducible defenses against invertebrate and vertebrate predators. The response pattern to gape‐limited invertebrate predators involves increased somatic growth and offspring body size but delayed maturity and reduced offspring numbers. In contrast to this general pattern, the freshwater model organism Daphnia magna has been reported to exhibit a different response when encountering the gape‐limited tadpole shrimp Triops cancriformis. Under laboratory conditions, D. magna showed increased somatic growth, earlier maturation, and an increase in both offspring number and size. We propose here that the discrepancy between the previously observed and the theory‐based response patterns against invertebrate predators is due to differences in food availability in the applied laboratory settings and assessed whether the defensive response of D. magna against T. cancriformis is modulated differently by food quantity and quality. We found a strong impact of food quantity and quality on the defense response of D. magna to T. cancriformis kairomones. The prey seem to be able to overcome trade‐offs between morphological defense traits and reproductive traits, but distinctly between high food quantity and high food quality. Thereby, reproductive traits were preferred over morphological defenses. Furthermore, the removal of particles from the T. cancriformis‐conditioned water caused a defense pattern in D. magna that was consistent with the general response pattern known from other invertebrate predators, thus explaining the described discrepancy to previous studies with T. cancriformis. Our study highlights the importance of assessing food‐related effects on predator–prey interactions to understand trophic relationships and food web processes.

Characterization of tadpole shrimp, Triops longicaudatus (Notostraca: Triopsidae), injury to rice and its effect on rice seedling establishment.

Rice seedlings of different stages of development were infested with tadpole shrimp (TPS, Triops longicaudatus [LeConte]), of different sizes in four experiments conducted in a lath house in Colusa, CA, during 2015 and 2016. Tadpole shrimp size was based on carapace length. Rice seedling stages were classified as S0 if no structures were present; S1 if only the coleoptile was present; S2 if the coleoptile and radicle were present; S3-I if the prophyll had emerged; S3-II if the first true leave had emerged but was not unfurled; and V1 if the first true leave was unfurled. Results showed that TPS of all sizes are capable of injuring rice and reducing seedling establishment, with larger TPS causing more seedling establishment reduction than medium or small TPS. The coleoptile, radicle, and roots were the structures most injured by TPS. During the S0 stage, TPS buried seeds, preventing their establishment. Seedling stages S1, S2, and S3-I were found to have the highest risk of injury by TPS, while seedling stage V1 had the lowest. Pearson's correlation between injured seedlings and the normalized number of established seedlings indicates that injury to the coleoptile, root, and radicle combined are the most important in preventing seedling establishment.

The use of 18S rRNA for identification of the first record of Tadpole Shrimp Lepidurus apus (Linnaeus, 1758) from Jordan

Abstract. Abushattal S, Alnasarat H, Alnaimat SM, Eid E. 2024. The use of 18S rRNA for identification of the first record of Tadpole Shrimp Lepidurus apus (Linnaeus, 1758) from Jordan. Biodiversitas 25: 1223-1229. The tadpole shrimps are living fossils that survive in temporary water pools and are considered benthic organisms that swim and feed on tiny organisms. Two genera of tadpole shrimps exist worldwide: Triops and Lepidurus, which share similar ecological niches and habitats but never coincide. The occurrence of the tadpole shrimp Lepidurus apus in Jordan was confirmed for the first time using the 18S rRNA Gene-Based PCR Assay. The experimental approach encompassed the amplification of biological specimens utilizing a universal amplicon measuring approximately 1,500 base pairs (bp), specifically targeting the 18S ribosomal RNA (rRNA) gene. Subsequently, the acquired sequences underwent scrutiny through BlastN search against the GenBank database for validation and comparative analysis. Genetic analysis was needed to define the species accurately, especially with tadpole shrimp's generally high morphological variability. This species was recorded in a temporary freshwater pool in the desert of Al-Jafr in Ma’an governorate in southern Jordan. The DNA analysis showed a 100% identical sequence of the 18S rRNA gene with Lepidurus apus sequences. This record is important due to the ecological role of the tadpole shrimps as filter feeders, consuming algae, bacteria, and other small particles of organic matter, and as a food source for various fish, birds, and other aquatic animals. In addition, it will pave the way for future research to identify its economic importance, such as its role in mosquito control and its potential role in aquaculture. Finally, tadpole shrimp are sensitive to environmental changes and could be used to indicate climatic changes and habitat degradation. This is mainly due to their sensitivity to changes in water quality, including temperature, pH, and chemical composition, and their niche requirements for survival and reproduction. In addition, monitoring tadpole shrimp distribution and comparing it with historical records can reveal patterns of climate-induced range shifts.

Ecotoxicological Effects of Potassium Dichromate on the Tadpole Shrimp Triops longicaudatus

The tadpole shrimp Triops longicaudatus is a freshwater crustacean with fast embryonic and larval development, short life cycle, and high fecundity. They are very active swimmers of a reasonable size, easy to spot and record. Such characteristics make it a promising candidate as an experimental model in ecotoxicology to evaluate the effects of aquatic pollutants, particularly using its locomotor behavior as an endpoint. To evaluate the sensitivity of T. longicaudatus and develop endpoints of interest, we conducted exposure experiments with lethal and sub-lethal concentrations of potassium dichromate, a compound known for its ecotoxicological importance and as a hexavalent chromium source. The endpoints evaluated were mortality, growth, sexual maturation, reproductive output, cholinesterase activity and locomotor/swimming behavior. The 96 h median lethal concentration was found to be 65 µg/L. Furthermore, exposure to potassium dichromate at higher concentrations had a significant negative impact on the growth rate of T. longicaudatus in terms of both body mass and length. The time for maturation was also delayed at higher concentrations. In addition, locomotor behavior allowed for the discrimination of all tested chromium concentrations and the control group and from each other, proving to be the most sensitive endpoint. Overall, the data support the potential of T. longicaudatus as a model for ecotoxicity testing, using apical endpoints with impact at the population level; in particular, results suggest that behavior assessments in this species might be useful for detecting hazardous compounds in environmental monitoring of freshwater ecosystems.

Integrating hydrological connectivity and zooplankton composition in Arctic ponds and lakes

Abstract Arctic landscapes are characterised by their numerous ponds and lakes. With increased climate warming and consequent changes in hydrological connectivity, the ecology of many of these waterbodies is expected to change. We sampled 13 ponds and 22 lakes for zooplankton and various limnological and physical environmental variables in the vicinity of Cambridge Bay, Nunavut (69.1169° N, 105.0597° W), with the aim of testing how well the degree of hydrological connectivity explained patterns in species composition and abundance and contributed to crustacean production. Ponds were hydrologically isolated while the lakes were arranged in four lake chains and ranged from the headwaters to highly inter‐connected lakes receiving water from one to 768 upstream lakes. In all sites combined, 77 zooplankton species were found, including 56 rotifers, six copepods, 11 cladocerans, two fairy shrimp species, a mysid, and a tadpole shrimp. We show that the zooplankton communities differed between hydrologically isolated (ponds) and connected (lakes) systems, with 17 species unique to ponds and 20 to lakes. Furthermore, the communities were more similar within lake chains and hence in lakes closer to each other. In ponds, distances between waterbodies had no impact on community similarity. Zooplankton abundance was higher in lakes (255 ind/L) than in ponds (65 ind/L) due to the higher number of rotifers that accounted for nearly 80% of the zooplankton abundance in lakes. In ponds, rotifers, cladocerans, and copepods were equally abundant. In terms of biomass, cladocerans represented 65% of total biomass in all waterbodies except for a chain of deep lakes that had abundant fish communities. In these lakes, cladoceran abundance and biomass were low and probably limited by fish predation. Zooplankton production was higher in ponds (4.6 mgC m−3 day−1) than in lakes (1.7 mgC m−3 day−1), and within lakes was lowest in the chain composed of large lakes (1.3 mgC m−3 day−1). The high production in ponds was closely linked to high zooplankton biomass and further explained by high gross primary production supported by relatively high nutrient concentrations in these shallow systems. Our study emphasises that hydrological connectivity is key to shaping zooplankton communities, although fish presence also appears to affect them. It shows that isolated ponds (that currently account for c83% of all waterbodies on southern Victoria Island) are hotspots of aquatic biological productivity that probably play an essential role in Arctic freshwater landscapes. Finally, our study provides critical baseline information on the current composition of Arctic zooplankton communities important for estimating climate change impacts.

Molecular and morphological evidence reveals the presence of the tadpole shrimp Lepidurus cf. couesii (crustacea: Branchiopoda) in Iran

Lepidurus couesii is a large freshwater branchiopod that is distributed broadly around the world. In this study, we used molecular and morphological methods to identify and record Lepidurus cf. couesii for the first time in Iran. The Almalou Gul specimens presented the characteristic number of rings, mediodorsal spines on the supra-anal plate, and the sulcus spines of the species L. couesii. A complete morphological characterization of the species and a comparison with previous records of Lepidurus apus in Iran is included in this work. Phylogenetic analysis based on the COI gene recovered the Iranian specimens as an independent lineage within the L. couesii species complex. The GMYC and the ASAP species delimitation models calculated at least four independent lineages within the L. couesii species-complex, some of them with probably restricted distributions. This study stresses –once again– the presence of several species-complexes within this group of crustaceans and the necessity to include molecular phylogenetic research to recognize the specific occurrence of different lineages within the genus Lepidurus.

Comparative genomics of Hox and ParaHox genes among major lineages of Branchiopoda with emphasis on tadpole shrimps

Hox and ParaHox genes (HPHGs) are key developmental genes that pattern regional identity along the anterior–posterior body axis of most animals. Here, we identified HPHGs in tadpole shrimps (Pancrustacea, Branchiopoda, Notostraca), an iconic example of the so-called “living fossils” and performed a comparative genomics analysis of HPHGs and the Hox cluster among major branchiopod lineages. Notostraca possess the entire Hox complement, and the Hox cluster seems to be split into two different subclusters, although we were not able to support this finding with chromosome-level assemblies. However, the genomic structure of Hox genes in Notostraca appears more derived than that of Daphnia spp., which instead retains the plesiomorphic condition of a single compact cluster. Spinicaudata and Artemia franciscana show instead a Hox cluster subdivided across two or more genomic scaffolds with some orthologs either duplicated or missing. Yet, branchiopod HPHGs are similar among the various clades in terms of both intron length and number, as well as in their pattern of molecular evolution. Sequence substitution rates are in fact generally similar for most of the branchiopod Hox genes and the few differences we found cannot be traced back to natural selection, as they are not associated with any signals of diversifying selection or substantial switches in selective modes. Altogether, these findings do not support a significant stasis in the Notostraca Hox cluster and further confirm how morphological evolution is not tightly associated with genome dynamics.

Genetic diversity, phylogeny and biogeography in the tadpole shrimp Triops granarius (Branchiopoda: Notostraca) in Qatar

The natural habitat of Qatar lacks permanent surface freshwater. Temporary ponds formed after heavy rains in the winter season are inhabited by the tadpole shrimp Triops granarius (Branchiopoda: Notostraca). In order to assess the molecular diversity of this species and to determine the relationship of Qatari populations with those from other regions, the sequences of 28S rRNA, 16S rRNA, and COI genes of individuals collected in five temporary pools were examined. Maximum likelihood phylogenetic analysis showed a high level of sequence uniformity at all three loci and indicates that the closest relatives of T. granarius in Qatar are from south Ural and northeastern Asia, including Mongolia, China, and Japan. This pattern is consistent with the geological evidence that T. granarius expanded more recently from North Africa to northeastern Asia through the Arabian land bridge. Lastly, the large genetic gap existing between the Qatar populations and their closest relatives supports the recognition of a new lineage.

The reference genome of the Vernal Pool Tadpole Shrimp, Lepidurus packardi.

In this paper, we report on the scaffold-level assembled genome for the federally endangered, California endemic crustacean Lepidurus packardi (the Vernal Pool Tadpole Shrimp). L. packardi is a key food source for other conserved California species including the California Tiger Salamander Ambystoma californiense. It faces significant habitat loss and fragmentation as vernal pools are threatened by urbanization, agricultural conversion, and climate change. This resource represents the first scaffold-level genome of any Lepidurus species. The assembled genome spans 108.6 Mbps, with 6 chromosome-length scaffolds comprising 71% of total genomic length and 444 total contigs. The BUSCO score for this genome is 97.3%, suggesting a high level of completeness. We produced a predicted gene set for this species trained on the Daphnia magna set of genes and predicted 17,650 genes. These tools can aid researchers in understanding the evolution and adaptive potential of alternative reproductive modes within this species.

Exploring mitogenome evolution in Branchiopoda (Crustacea) lineages reveals gene order rearrangements in Cladocera

The class Branchiopoda, whose origin dates back to Cambrian, includes ~ 1200 species which mainly occupy freshwater habitats. The phylogeny and systematics of the class have been debated for long time, until recent phylogenomic analyses allowed to better clarify the relationships among major clades. Based on these data, the clade Anostraca (fairy and brine shrimps) is sister to all other branchiopods, and the Notostraca (tadpole shrimps) results as sister group to Diplostraca, which includes Laevicaudata + Spinicaudata (clam shrimps) and Cladoceromorpha (water fleas + Cyclestherida). In the present analysis, thanks to an increased taxon sampling, a complex picture emerges. Most of the analyzed mitogenomes show the Pancrustacea gene order while in several other taxa they are found rearranged. These rearrangements, though, occur unevenly among taxa, most of them being found in Cladocera, and their taxonomic distribution does not agree with the phylogeny. Our data also seems to suggest the possibility of potentially homoplastic, alternative gene order within Daphniidae.

Effect of Space Flight Factor on Dormant Stages in Aquatic Organisms: A Review of International Space Station and Terrestrial Experiments.

This work is a review of the experiments carried out in the Russian segment of the ISS (inside and outside) from 2005 to 2016 on the effect of the space flight factor on the resting stages of organisms. In outer space, ultraviolet, a wide range of high and low temperatures, cosmic radiation, altered gravity, modified electromagnetic field, vacuum, factors of technical origin, ultrasound, microwave radiation, etc. and their combination determine the damaging effect on living organisms. At the same time, biological dormancy, known in a wide range of bacteria, fungi, animals and plants, allows them to maintain the viability of their dormant stages in extreme conditions for a long time, which possibly allows them to survive during space flight. From 2005 to 2016, the resting stages (propagules) of micro- and multicellular organisms were tested on the ISS to assess their ability to survive after prolonged exposure to the conditions of open space and space flight. Among the more than 40 species studied, about a third were dormant stages of aquatic organisms (eggs of cyprinodont fish, daphnia embryos, resting eggs of fairy shrimps, tadpole shrimps, copepods and ostracods, diapausing larvae of dipterans, as well as resting cysts of algae). The experiments were carried out within the framework of four research programs: (1) inside the ISS with a limited set of investigated species (Akvarium program); (2) outside the station in outer space without exposure to ultraviolet radiation (Biorisk program); (3) under modified space conditions simulating the surface of Mars (Expose program); and (4) in an Earth-based laboratory where single-factor experiments were carried out with neutron radiation, modified magnetic field, microwave radiation and ultrasound. Fundamentally new data were obtained on the stability of the resting stages of aquatic organisms exposed to the factors of the space environment, which modified the idea of the possibility of bringing Earth life forms to other planets with spacecraft and astronauts. It also can be used for creating an extraterrestrial artificial ecosystem and searching for extraterrestrial life.

Upper thermal threshold of Lepidurus arcticus (Branchiopoda, Notostraca) in lakes on the southern outreach of its distribution range

The Arctic tadpole shrimp Lepidurus arcticus has a circumpolar distribution and the Scandes (Fennoscandian Mountains) marks its southernmost limit in Europe. Within this area, 391 natural and 88 regulated lakes with L. arcticus have been identified, of which 87% are above the treeline. The lakes hosting L. arcticus decrease in altitude from south to north, which results from its temperature preferences. The majority of the locations are at a lower lake air temperature than 11°C which is equivalent to a water temperature near 14°C. This is assumed to be near the upper thermal threshold for L. arcticus. In lakes that exceed this average summer water temperature (1 July – 15 September), sustainable populations seem to be rare. In warmer lakes, life cycle mismatches are assumed to explain the absence of L. arcticus, most likely by affecting the embryo and juvenile stages. The distribution appears to be dichotomous, with one large northern area north of 65°N and one separated southern “island”. Only two locations of L. arcticus are known for the area between latitudes 62.88 and 64.39°N. In this part of the Scandes, the lakes are likely too warm to host L. arcticus as most of them are situated below 700 m a.s.l. This may also be the case in the northernmost region, north of 70°N, where only 11 populations are recorded. Most of the lakes in this area typically occurs below 400 m a.s.l. L. arcticus populations are sensitive to fish predation, and dense fish populations may be another stressor limiting its distribution. In contrast to water bodies in the High Arctic where L. arcticus only exists in shallow, fishless ponds, in the Scandes they co-exist with fish in 97% of the findings. Global warming has already modified the environment of the Scandes, and populations of L. arcticus are at threat in many of the small and shallow water bodies at low altitudes.

Alternative Chemical Control Options and Monitoring Techniques for Triops longicaudatus (Notostraca: Triopsidae) in California Rice.

The tadpole shrimp (Triops longicaudatus (Leconte); Notostraca; Triopsidae) is a vernal pool crustacean that has emerged as a significant pest for many rice farmers in California. Currently, lambda-cyhalothrin is the commercial standard and sole management practice for TPS, but resistance appears to be emerging. Field and laboratory trials were conducted from 2015 to 2018 at the Rice Experiment Station in Biggs, California, and in greenhouses at the University of California (UC) Davis to evaluate the efficacy of several alternative chemical controls and to explore early indicators of TPS activity and damage as monitoring tools. TPS mortality in plots treated with azadirachtin was not significantly different from those in the untreated control across all trials. Copper sulfate, lambda-cyhalothrin, and clothianidin were consistently effective across both lab and field trials. Chlorantraniliprole generated effective control in four of the five trials, whereas two diflubenzuron rates generated adequate control in the field, but not in laboratory bioassays. Thus, there appear to be several effective alternative control options available for farmers, should resistance to lambda-cyhalothrin continue to spread. Water turbidity (measured using a scale of 1-4) and the number of dislodged seedlings were both significantly correlated with TPS counts in field studies. Turbidity exhibited the highest correlations with TPS counts, suggesting that with further refinement it could play a valuable role in monitoring TPS populations.

Comparative genomics of tadpole shrimps (Crustacea, Branchiopoda, Notostraca): Dynamic genome evolution against the backdrop of morphological stasis

This analysis presents five genome assemblies of four Notostraca taxa. Notostraca origin dates to the Permian/Upper Devonian and the extant forms show a striking morphological similarity to fossil taxa. The comparison of sequenced genomes with other Branchiopoda genomes shows that, despite the morphological stasis, Notostraca share a dynamic genome evolution with high turnover for gene families' expansion/contraction and a transposable elements content comparable to other branchiopods. While Notostraca substitutions rate appears similar or lower in comparison to other branchiopods, a subset of genes shows a faster evolutionary pace, highlighting the difficulty of generalizing about genomic stasis versus dynamism. Moreover, we found that the variation of Triops cancriformis transposable elements content appeared linked to reproductive strategies, in line with theoretical expectations. Overall, besides providing new genomic resources for the study of these organisms, which appear relevant for their ecology and evolution, we also confirmed the decoupling of morphological and molecular evolution.

Thwarting predators? A three-dimensional perspective of morphological alterations in the freshwater crustacean Daphnia.

Predation is a major selective agent, so that many taxa evolved phenotypically plastic defensive mechanisms. Among them are many species of the microcrustacean genus Daphnia, which respond to an increased predation risk by developing inducible morphological alterations. Some of these features are obvious and easily recognized, e.g., crests in D. longicephala, while others are rather hidden, such as the bulkier shape of D. magna induced by the presence of the tadpole shrimp Triops. In this study we investigated the extraordinary diversity of morphological adaptations in the presence of predators with different foraging strategies in six predator-prey systems. For the first time we were able to analyze the unexposed and predator-exposed morphs comprehensively using three-dimensional scanning and reconstruction. We show that morphological changes are manifold in appearance between species and predators, and go beyond what has been known from previous 2D analyses. This further demonstrates the enormous trait flexibility of Daphnia. Interestingly, we found that among this variety some species share morphological strategies to counter a predator, while others use a different strategy against the same predator. Based on these intra- and interspecific comparisons, we discuss the mechanisms by which the respective defense might operate. These data therefore contribute to a deeper understanding of the inducible defenses’ morphology as well as their diversified modes of operation in Daphnia, being a cornerstone for subsequent investigations, including the determination of costs associated with morphological change.