The emergence of the COVID-19 pandemic has underscored the urgent requirement for rapid and accurate diagnostic methods to detect the virus and control its spread. Metal Organic Frameworks (MOFs) have gained significant interest in biosensing applications because of their exceptional properties. This study investigates the microwave synthesis of zeolitic imidazolate framework-8 (ZIF-8) and explores its potential as a fluorescent biosensor for detecting COVID-19 RNA sequences. The microwave method enables a rapid, eco-friendly, and efficient synthesis of ZIF-8. Characterization tests including PXRD, FE-SEM, TGA, and FT-IR confirmed the high crystallinity and thermal stability of ZIF-8. To optimize the biosensor’s performance, a 23 factorial design is pursued. The factorial design allows determining the individual and simultaneous effects of the control parameters such as ZIF-8 concentration, buffer pH, and solution temperature on the quenching efficiency. The results demonstrate that the parameters combination of 25 °C, pH 8.0, and 0.7 mg/mL ZIF-8 concentration results in the highest quenching percentage of 72.41 %. The study of the quenching mechanism confirms that the P-DNA can form electrostatic and π-π stacking interactions with ZIF-8, to produce a P-DNA@ZIF-8 complex. It is also found that photoinduced electron transfer is more dominant than fluorescence resonance energy transfer in the quenching mechanism. The biosensor showed a high sensitivity towards the target COVID-19 RNA with a very low detection limit of 12.02 pM, a fast detection time of 40 minutes, and high selectivity to the target RNA. This study shows the potential of ZIF-8 as a feasible and environmentally friendly material for swiftly and accurately detecting COVID-19 RNA sequences.
Read full abstract