A non-perturbative one gluon exchange quark-antiquark interaction is considered to compute flavor dependent U(3) Nambu-Jona-Lasinio (NJL)-type interaction of the form $G_{ij, \Gamma} (\bar{\psi} \lambda_i \Gamma \psi ) ( \bar{\psi} \lambda_j \Gamma \psi)$ for $i,j=0...8$ and $\Gamma=I, i \gamma_5$ from one loop polarization process with non degenerate u-d-s quark effective masses. The resulting NJL-type coupling constants in all channels are resolved in the long-wavelength limit and numerical results are presented for different choices of an effective gluon propagator. Leading deviations with respect to a flavor symmetric coupling constant are found to be of the order of $(M_{f_2}^*-M_{f_1}^*)^n/(M_{f_2}^*+M_{f_1}^*)^n$, for $n=1,2$, where $M_{f_i}^*$ are the effective masses of quarks $f_1,f_2=u, d$ and $s$. The scalar channel coupling constants $G_{ij, s}$ can be considerably smaller than pseudoscalar ones. The effect of the flavor-dependence of coupling constants for the masses of pions and kaons may be nearly of the same order of magnitude as the effect of the u,d and s quark mass non-degeneracy. The effect of these coupling constants is also verified for some of the light scalar mesons masses, usually described by quark-antiquark states, and for some observables of the pseudoscalar mesons.