Surface Accumulation Research Articles

Exploration and Empirical Study on Spatial Distribution of SOC at the Core Area in Coastal Tamarix Forests’ Inland Side of Changyi National Marine Ecological Area

The forest soil carbon pool plays a vital role in terrestrial ecosystems, being of great significance for maintaining global balance, regulating the global carbon cycle, and facilitating ecological restoration. Shandong Changyi Marine Ecological Special Protection Area is the only state-level marine special protection area in China with tamarisk as the main object of protection, and it is the largest continuous and the best preserved natural tamarisk forest distribution area on the mainland coast of China. Compared to other forested areas, research on the spatial distribution of SOC at the core area in coastal Tamarix forests’ inland side appears to be relatively scarce. Based on this, this paper takes the core area of the Changyi National Marine Ecological Special Protection Zone, located on the southern coast of Laizhou Bay, as the research subject, based on the potassium dichromate oxidation-external heating, one-way ANOVA, and Bonferroni methods, analyzing the spatial distribution of the SOC content inland of coastal Tamarix forests. The research yielded the following conclusions: (1) The surface layer (0–10 cm) contributes significantly to the total SOC content within a 0–60 cm depth, accounting for at least 31% and shows notable surface accumulation. (2) The combined SOC content in the surface and subsurface layers (10–20 cm) accounts for at least 50% of the total SOC content within a 0–60 cm depth, indicating the dominance of these two soil layers in carbon storage. (3) The SOC content decreases with the soil depth at all six sampling points within the 0–60 cm range, with a marked drop from 0–10 cm to 10–20 cm. (4) One-way ANOVA and multiple comparisons reveal that the soil depth significantly affects the SOC distribution, particularly between the surface and 20–30 cm layers (p < 0.001), indicating high robustness and statistical significance. (5) Horizontally, the total SOC at 0 m is 45% lower than at 2 m in the 0–60 cm layer. The SOC in the 0–20 cm layer fluctuates significantly with distance from the shrub trunk, while the SOC in the 30–60 cm layers is low and stable, with minimal variations with depth. In addition, this study found that the SOC content in the core area of the protected area is lower than that in the common forest ecosystem. In the future, scientific ecological restoration projects and management protection methods should be used to improve soil’s carbon storage and carbon sink capacity. These findings not only validate the patterns of SOC’s spatial distribution in coastal Tamarix forest wetlands but also provide a scientific basis for carbon assessment and the formulation of ecological protection measures in coastal wetlands.

Carbon source, cell density, and the microbial community control inhibition of V. cholerae surface colonization by environmental nitrate.

V. cholerae colonizes the terminal ileum where both oxygen and nitrate are available as terminal electron acceptors. V. cholerae biofilm formation is inhibited by nitrate due to its conversion to nitrite during V. cholerae respiration. When co-cultured with a microbe that can further reduce nitrite, V. cholerae surface accumulation in the presence of nitrate is rescued. The contribution of biofilm formation to ileal colonization depends on the composition of the microbiota. We propose that the intestinal microbiota predisposes mammalian hosts to cholera by consuming the nitrite generated by V. cholerae in the terminal ileum. Differences in the intestinal abundance of nitrite-reducing microbes may partially explain the differential susceptibility of humans to cholera and the resistance of non-human mammalian models to intestinal colonization with V. cholerae .

Activating New Reaction Pathways in Electrochemical CO2 Conversion Using Pulsing

Electrochemical CO2 conversion can result in a variety of products, often as a mixture, and controlling the product selectivity remains a key challenge. It has been shown that pulsing the electrochemical potential can lead to altered product distributions, influenced by effects on, e.g., transport, double-layer rearrangement, adsorption/desorption, and changes to electrode structure and composition (1).Herein we report our observations using metal electrodes normally selective for the 2-electron formation of CO as major product under steady-state (potentiostatic) conditions, finding that they can produce significant amounts of higher-order products (including methane and ethylene) under the application of pulse potential waveforms. We confirm this is not due to metal impurities in the system, but is significantly affected by phenomena such as surface restructuring and accumulation of liquid products. Furthermore, time-resolved differential electrochemical mass spectrometry (DEMS) measurements reveal distinctly different transient behaviors between the different gaseous products, providing key new mechanistic insight for clarifying the roles of pulsing.(1) Casebolt, R.; Levine, K.; Suntivich, J.; Hanrath, T. Pulse Check: Potential Opportunities in Pulsed Electrochemical CO2 Reduction. Joule 2021, 5 (8), 1987–2026. https://doi.org/10.1016/j.joule.2021.05.014. Figure: Pulsed CO2 reduction on Ag (manuscript pending) -- a) Pulsing waveform with parameter definitions. b) Gas product evolution rates as measured by GC during continuous electrochemical pulsing of a silver foil electrode. c) DEMS study of porous Ag film electrodes, revealing product formation transient behaviors. d) Selectivity dependence on varying the cathodic step potential (Ec) while Ea is fixed. Figure 1

STAMBPL1/TRIM21 Balances AXL Stability Impacting Mesenchymal Phenotype and Immune Response in KIRC.

Kidney renal clear cell carcinoma (KIRC) is recognized as an immunogenic tumor, and immunotherapy is incorporated into its treatment landscape for decades. The acquisition of a tumor mesenchymal phenotype through epithelial-to-mesenchymal transition (EMT) is associated with immune evasion and can contribute to immunotherapy resistance. Here, the involvement of STAM Binding Protein Like 1 (STAMBPL1) is reported in the development of mesenchymal and immune evasion phenotypes in KIRC cells. Mechanistically, STAMBPL1 elevated protein abundance and surface accumulation of TAM Receptor AXL through diminishing the TRIM21-mediated K63-linked ubiquitination and subsequent lysosomal degradation of AXL, thereby enhancing the expression of mesenchymal genes while suppressing chemokines CXCL9/10 and HLA/B/C. In addition, STAMBPL1 enhanced PD-L1 transcription via facilitating nuclear translocation of p65, and knockdown (KD) of STAMBPL1 augmented antitumor effects of PD-1 blockade. Furthermore, STAMBPL1 silencing and the tyrosine kinase inhibitor (TKI) sunitinib also exhibited a synergistic effect on the suppression of KIRC. Collectively, targeting the STAMBPL1/TRIM21/AXL axis can decrease mesenchymal phenotype and potentiate anti-tumor efficacy of cancer therapy.

Constructing hollow bivalve nanocomposite ZSM-5 with inverse Al zoned distribution to strengthen the stepwise conversion of methanol to aromatics

ZSM-5 catalyzed methanol aromatization was one of the alternative routes for petroleum aromatics production, but its performance was limited to the unreasonable acid distribution and pore structure of ZSM-5. Herein, a series of dual-ZSM-5 nanocomposite catalysts with inverse Al zoned distribution have been constructed by seed growth-desiliconization-recrystallization strategy. It was found that the solid ZSM-5 with decreased Al gradient distribution promoted the conversion of light hydrocarbons intermediates, which obtained high aromatic selectivity of 23.7 % even at a low acid density. However, the diffusion of aromatics generated in interior area was inhibited by external shell and tended to be deep alkylated and transform into coke precursors, resulting in poor catalytic lifetime of 37 h. Desiliconization and recrystallization in Na+-containing alkali liquor over a composite ZSM-5 with conventional Al zoned distribution could realize the reversal of Al zoned distribution. Not only that, a huge internal cavity and a large amount of interlayer cavity were generated, which promoted the diffusion of olefin intermediates and aromatic products. Because of this, the catalytic lifetime of hollow bivalve ZSM-5 catalyst signally improved to 58 h. Based on this, directly stacking the high Si/Al ratio ZSM-5 crystals on low high Si/Al ratio core could signally improve anti-coking performance due to the abundant surface accumulation mesoporous, and the lifetime further prolonged to 99 h with the aromatic selectivity of 24.0 %. This work could provide a reference for the design of ZSM-5 catalyst with special composite structure and Al zoned distribution for stepwise aromatization of methanol with high stability.

The Effects and Contributions of Ecological Factors on Soil Carbon, Water and Nutrient Storages Under Long-Term Vegetation Restoration on the Eastern Loess Plateau

Vegetation restoration plays a crucial role in conserving soil and water, as well as rehabilitating ecosystems, by enhancing soil properties and vegetation attributes. The evaluation of the ecological consequences among different vegetation restoration types can be achieved by clarifying the impacts on carbon, water and nutrient storages. In this study, we selected four typical vegetation restoration types (Pinus tabuliformis forest (PTF), Platycladus orientalis forest (POF) and Robinia pseudoacacia forest (RPF) as typical planted forests, and the natural secondary forest (NSF) as the control treatment) in the eastern Loess Plateau of China. The soil properties (at 0–200 cm depth) and vegetation attributes (including arborous, shrubs and herbaceous plants) were measured, as well as calculated soil carbon, water and nutrient storages, with a total of 1600 soil samples and 180 vegetation survey plots. The partial redundancy analysis (pRDA) and correlation analysis were also used to analyze the contributions and relationships among environmental factors, soil eco-hydrology and nutrient supplement services in different forestry ecosystems. The results indicate the following: (1) NSF has the lowest soil bulk density (1.21 ± 0.184 g·cm−3). Soil properties varied significantly at vertical scales, and had obvious surface accumulation. (2) Soil moisture storages were better in natural forests than those in planted forests, with more drastic changes in soil moisture dynamics. (3) The soil carbon, nitrogen, and phosphorus storages significantly differed among four vegetation types, with the highest carbon storages in PTF (207.75 ± 0.674 t·ha−1), the highest nitrogen storages in POF (5.54 t·ha−1), and the highest phosphorus storages in RPF (4.33 t·ha−1), respectively. (4) Soil carbon storages depend primarily on the coupling effect of soil properties and precipitation, while nutrient storage is mainly influenced by soil properties. The results quantify the significant differences in soil water, carbon, and nutrient storage across various vegetation restoration types, and reveal the individual and combined contributions of environmental factors, providing new insights into the mechanisms driving these differences. These findings offer practical guidance for the sustainable management of forest ecosystems and the optimization of ecological restoration strategies on the Loess Plateau.

Forecasting the groundwater levels in the Baltic through standardized index analysis

In regions where groundwater forms the primary source of drinking water, comprehending the prospective availability of subsurface water resources due to climate change is of paramount importance.This study evaluates the impact of climate change on groundwater levels in the Baltic States until the end of this century. It employs link between surface and subsurface standardized indices. For forecast it uses various Representative Concentration Pathways (RCP) alongside different Regional Climate Models (RCM).By linking historical groundwater drought episodes with calculated surface drought indices and accumulation periods observed during defined climate Normals, we project groundwater levels for the short, medium, and long-term future. The study incorporates 13 EURO-CORDEX RCMs under three RCP scenarios.Our analysis reveals that, compared to the recent climate Normals, an overall increase in groundwater levels is expected at most study sites. However, lower groundwater levels are estimated in the near future. The projected impacts show no significant seasonal bias or spatial conformity. Although these findings are specific to the Baltic region, the methodologies described can be readily adapted for global application.

How the effect of earthworms on soil organic matter mineralization and stabilization is affected by litter quality and stage of soil development

Globally soil fauna consumes about half of the annual litter fall. An important question is how this activity affects the mineralization and stabilization of soil organic matter. Here we explore how much earthworms influence the decomposition of litter and the stabilization of organic matter in soils at various stages of soil development (various soil age) that are supplied with litter of various quality. The laboratory mesocosms consist of litter and a mineral layer. The mineral soils originated either from spruce and alder stands growing either on post-mining soils (young soils after about 50 years of soil development) or from soils in the close vicinity of post-mining sites (mature soils with several thousand years of soil development), the mineral soils were supplied by matching litter, the mesocosms were either without earthworms or with two individuals of earthworms. The earthworm effect showed statistically significant interaction with tree and soil age: earthworms increased respiration in both alder soils, but in spruce soils only in mature soil, while the opposite was true for young soils. In general, earthworms promoted the removal of litter from the soil surface and carbon accumulation in the mineral soil. Earthworms promoted C storage in mineral associated organic matter (MAOM), especially in young spruce soils. The results suggested that earthworm activity in young soils which were far from saturation (spruce on post-mining soils) promotes soil C sequestration by promoting C storage in MAOM, whereas earthworms in mature, C saturated soils tend to promote soil respiration. More broadly, earthworms effect on soil depends on stage of soil C saturation.

Characterization of spent nuclear fuel canister surface roughness using surface replicating molds

In this study we present a replication method to determine surface roughness and to identify surface features when a sample cannot be directly analyzed by conventional techniques. As a demonstration, this method was applied to an unused spent nuclear fuel dry storage canister to determine variation across different surface features. In this study, an initial material down-selection was performed to determine the best molding agent and determined that non-modified Polytek PlatSil23-75 provided the most accurate representation of the surface while providing good usability. Other materials that were considered include Polygel Brush-On 35 polyurethane rubber (with and without Pol-ease 2300 release agent), Polytek PlatSil73-25 silicone rubber (with and without PlatThix thickening agent and Pol-ease 2300 release agent), and Express STD vinylpolysiloxane impression putty. The ability of PlatSil73-25 to create an accurate surface replica was evaluated by creating surface molds of several locations on surface roughness standards representing ISO grade surfaces N3, N5, N7, and N8. Overall, the molds were able to accurately reproduce the expected roughness average (Ra) values, but systematically over-estimated the peak-valley maximum roughness (Rz) values. Using a 3D printed sample cell, several locations across the stainless steel spent nuclear fuel canister were sampled to determine the surface roughness. These measurements provided information regarding variability in normal surface roughness across the canister as well as a detailed evaluation on specific surface features (e.g., welds, grind marks, etc.). The results of these measurements can support development of dry storage canister ageing management programs, as surface roughness is an important factor for surface dust deposition and accumulation. This method can be applied more broadly to different surfaces beyond stainless steel to provide rapid, accurate surface replications for analytical evaluation by profilometry.

Quantitative analysis of microplastics in beach sand via low-temperature solvent extraction and thermal degradation: Effects of particle size and sample depth

Quantifying trace levels of microplastics in complex environmental media remains a challenge. In this study, an approach combining field collection of samples from different depths, sample size fractionation, and plastic quantification via pyrolysis-gas chromatography–mass spectrometry (Py-GC–MS) was employed to identify and quantify microplastics at two public beaches along the northeast coast of the U.S. (Salisbury beach, MA and Hampton beach, NH). A simple sampling tool was used to collect beach sand from depth intervals of 0–5 cm and 5–10 cm, respectively. The samples were sieved to give three size fractions: coarse (>1.2 mm), intermediate (100 μm–1.2 mm), and fine (1.2 μm–100 μm) particles. Following density separation and wet peroxide oxidation, a low-temperature solvent extraction protocol involving 2-chlorophenol was used to extract polyester (PET), polystyrene (PS), polyamide (PA), and polyvinyl chloride (PVC). The extract was analyzed using Py-GC–MS for the respective polymers, while the solid residue was pyrolyzed separately for polyethylene (PE) and polypropylene (PP). The one-step solvent extraction method significantly simplified the sample matrix and improved the sensitivity of analysis. Among the samples, PET was detected in greater quantities in the fine fraction than in the intermediate size fraction, and PET fine particles were located predominantly in the surface sand. Similar to PET, PS was detected at higher mass concentrations in the fine particles in most samples. These results underscore the importance of beach environment for plastic fragmentation, where a combination of factors including UV irradiation, mechanical abrasion, and water exposure promote plastic breakdown. Surface accumulation of fine plastic particles may also be attributed to transport of microplastics through wind and tides. The proposed sample treatment and analysis methods may allow sensitive and quantitative measurements of size or depth-related distribution patterns of microplastics in complex environmental media.

Distribution characteristics of selenium and influencing factors in the plant–soil system of an arid oasis

A total of 323 topsoil samples, 63 profile soil samples, and 55 plant root samples were collected from an oasis area on the eastern margin of the Tarim Basin in China and the selenium content and other physical and chemical indicators were analyzed. The results showed that the average selenium content in the surface soil was 0.15 mg/kg, which was lower than the national background value, and only about 4% of the surveyed land area was classified as rich in selenium. The vertical distribution of selenium was characterized by surface accumulation. The organic carbon and clay content were positively correlated and the pH levels negatively correlated with the selenium content. Soil type had little effect on selenium content, though the selenium levels in Anthrosols and Gleysols were relatively high. The selenium content for cultivated land and garden soil was higher than for other land use types. The enrichment of selenium in plant roots was highest for Apocynum venetum L., followed by Pulicaria dysenterica (L.). Bernh., Populus euphratica Olive, Tamarix chinensis Lour., Phragmites australis (Cav.) Trin. ex Steud, and Pyrus bretschneideri Rehder. Correlation analysis revealed that the enrichment of selenium in the soil was mainly controlled by supergenesis in conjunction with long-distance migration and deposition. Overall, this study provides useful information for the rational development and utilization of regional land resources.

Cell-intrinsic mechanical regulation of plasma membrane accumulation at the cytokinetic furrow

Cytokinesis is the process where the mother cell's cytoplasm separates into daughter cells. This is driven by an actomyosin contractile ring that produces cortical contractility and drives cleavage furrow ingression, resulting in the formation of a thin intercellular bridge. While cytoskeletal reorganization during cytokinesis has been extensively studied, less is known about the spatiotemporal dynamics of the plasma membrane. Here, we image and model plasma membrane lipid and protein dynamics on the cell surface during leukemia cell cytokinesis. We reveal an extensive accumulation and folding of the plasma membrane at the cleavage furrow and the intercellular bridge, accompanied by a depletion and unfolding of the plasma membrane at the cell poles. These membrane dynamics are caused by two actomyosin-driven biophysical mechanisms: the radial constriction of the cleavage furrow causes local compression of the apparent cell surface area and accumulation of the plasma membrane at the furrow, while actomyosin cortical flows drag the plasma membrane toward the cell division plane as the furrow ingresses. The magnitude of these effects depends on the plasma membrane fluidity, cortex adhesion, and cortical contractility. Overall, our work reveals cell-intrinsic mechanical regulation of plasma membrane accumulation at the cleavage furrow that is likely to generate localized differences in membrane tension across the cytokinetic cell. This may locally alter endocytosis, exocytosis, and mechanotransduction, while also serving as a self-protecting mechanism against cytokinesis failures that arise from high membrane tension at the intercellular bridge.

Parkinson’s-linked LRRK2-G2019S derails AMPAR trafficking, mobility, and composition in striatum with cell-type and subunit specificity

Parkinson's disease (PD) is a multifactorial disease that affects multiple brain systems and circuits. While defined by motor symptoms caused by degeneration of brainstem dopamine neurons, debilitating non-motor abnormalities in fronto-striatal-based cognitive function are common, appear early, and are initially independent of dopamine. Young adult mice expressing the PD-associated G2019S missense mutation in Lrrk2 also exhibit deficits in fronto-striatal-based cognitive tasks. In mice and humans, cognitive functions require dynamic adjustments in glutamatergic synapse strength through cell-surface trafficking of α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid-type glutamate receptors (AMPARs), but it is unknown how LRRK2 mutation impacts dynamic features of AMPAR trafficking in striatal projection neurons (SPNs). Here, we used Lrrk2G2019S knockin mice to show that surface AMPAR subunit stoichiometry is altered biochemically and functionally in mutant SPNs in dorsomedial striatum to favor the incorporation of GluA1 over GluA2. GluA1-containing AMPARs were resistant to internalization from the cell surface, leaving an excessive accumulation of GluA1 on the surface within and outside synapses. This negatively impacted trafficking dynamics that normally support synapse strengthening, as GluA1-containing AMPARs failed to increase at synapses in response to a potentiating stimulus and showed significantly reduced surface mobility. Surface GluA2-containing AMPARs were expressed at normal levels in synapses, indicating subunit-selective impairment. Abnormal surface accumulation of GluA1 was independent of PKA activity and was limited to D1R SPNs. Since LRRK2 mutation is thought to be part of a common PD pathogenic pathway, our data suggest that sustained, striatal cell-type specific changes in AMPAR composition and trafficking contribute to cognitive or other impairments associated with PD.

Tigilanol Tiglate-Induced Changes in Secretome Profiles Alter C-Met Phosphorylation and Cell Surface Protein Expression in H357 Head and Neck Cancer Cells.

Tigilanol tiglate (TT, also known as EBC-46) is a novel, plant-derived diterpene ester possessing anticancer and wound-healing properties. Here, we show that TT-evoked PKC-dependent S985 phosphorylation of the tyrosine kinase MET leads to subsequent degradation of tyrosine phosphorylated p-Y1003 and p-Y1234/5 MET species. PKC inhibition with BIM-1 blocked S985 phosphorylation of MET and led to MET cell surface accumulation. Treatment with metalloproteinase inhibitors prevented MET-ECD release into cell culture media, which was also blocked by PKC inhibitors. Furthermore, unbiased secretome analysis, performed using TMT-technology, identified additional targets of TT-dependent release of cell surface proteins from H357 head and neck cancer cells. We confirm that the MET co-signalling receptor syndecan-1 was cleaved from the cell surface in response to TT treatment. This was accompanied by rapid cleavage of the cellular junction adhesion protein Nectin-1 and the nerve growth factor receptor NGFRp75/TNFR16. These findings, that TT is a novel negative regulator of protumorigenic c-MET and NGFRp75/TNFR16 signalling, as well as regulating Nectin-1-mediated cell adhesion, further contribute to our understanding of the mode of action and efficacy of TT in the treatment of solid tumours.

Physicochemical analysis of deterioration affecting the darkening of rock art in Maros-Pangkep, South Sulawesi, Indonesia

This study investigates the darkening processes affecting Maros-Pangkep rock art through a comprehensive multianalytical approach. We integrate in-situ color index measurements using Nix color Pro 2 with various physicochemical characterization techniques, including optical microscopy, XRF, SEM-EDS, Raman spectroscopy, and FTIR. By examining microbial, geochemical, and anthropogenic factors on rock art pigment samples, we establish a clear correlation between the formation of blackish-gray layers and reduced chromaticity values, indicating a significant darkening process. The shift in pigment color from vibrant red or purple to a prevailing blackish-gray hue is attributed to surface accumulation. Surface morphology analysis reveals distinct blackish deposits and delicate white fibrous structures on darkened rock art. Elemental composition analysis demonstrates heightened blackish deposit formation and increased phosphorus content in darkened samples. SEM-EDS characterization exposes gypsum morphology, with filament-like structures prevailing in heavily darkened samples, highlighting the role of both geochemical and microbial factors in deposit layer formation. FTIR spectra results confirm the presence of gypsum minerals, which are attributed to the substrate minerals and/or mineral weathering product, and unveil the existence of organic compounds, indicating microbial activity. Additionally, Raman spectroscopy reveals the anthropogenic contribution, notably soot deposition produced by human activities, to the darkening of rock art. This study underscores the need for a holistic preservation approach addressing natural, human, and microbial impacts on cultural heritage sites. Further research is also needed to conduct cross-sectional stratigraphical analysis to understand the accurate mechanism of the deterioration process on the rock art. Moreover, excavation measures regarding the possible relationship of soot deposition with human activities are also important to be carried out at the sites.

APPLICATION OF PERMEABLE ASPHALT PAVEMENT CONSTRUCTION IN TRAFFIC AREAS

Lithuania’s total road network consists of more than 84000 km of roads, of which more than 21000 km are national roads. Roads of national importance are managed by the Lithuanian Road Administration. The remaining roads are classified as local roads managed by local governments. Road installation and maintenance often lead to the problem of surface water drainage and accumulation on the road surface. The aim of this study is to identify and propose the most appropriate permeable asphalt pavement construction to solve this problem, taking into account the purpose of the application and the class of pavement structure. The scope of the study identifies three recommended permeable asphalt pavement designs for the installation of DK 0.1-DK 1 pavement structures in ancillary streets, parking and recreation areas where light vehicle traffic with occasional heavy vehicle traffic. It has also been found that in areas of high traffic intensity, it is appropriate to use an alternative to permeable pavements – a permeable pavement design for the shoulder, where the roadway structure is impermeable to water and the shoulders are permeable to water (a permeable pavement structure is installed). The recommended permeable asphalt pavement structures, when properly selected, reduce the risk of flooding on the roadway.

Loss of tumor suppressor TMEM127 drives RET-mediated transformation through disrupted membrane dynamics

Internalization from the cell membrane and endosomal trafficking of receptor tyrosine kinases (RTKs) are important regulators of signaling in normal cells that can frequently be disrupted in cancer. The adrenal tumor pheochromocytoma (PCC) can be caused by activating mutations of the rearranged during transfection (RET) receptor tyrosine kinase, or inactivation of TMEM127, a transmembrane tumor suppressor implicated in trafficking of endosomal cargos. However, the role of aberrant receptor trafficking in PCC is not well understood. Here, we show that loss of TMEM127 causes wildtype RET protein accumulation on the cell surface, where increased receptor density facilitates constitutive ligand-independent activity and downstream signaling, driving cell proliferation. Loss of TMEM127 altered normal cell membrane organization and recruitment and stabilization of membrane protein complexes, impaired assembly, and maturation of clathrin-coated pits, and reduced internalization and degradation of cell surface RET. In addition to RTKs, TMEM127 depletion also promoted surface accumulation of several other transmembrane proteins, suggesting it may cause global defects in surface protein activity and function. Together, our data identify TMEM127 as an important determinant of membrane organization including membrane protein diffusability and protein complex assembly and provide a novel paradigm for oncogenesis in PCC where altered membrane dynamics promotes cell surface accumulation and constitutive activity of growth factor receptors to drive aberrant signaling and promote transformation.

Loss of tumor suppressor TMEM127 drives RET-mediated transformation through disrupted membrane dynamics.

Internalization from the cell membrane and endosomal trafficking of receptor tyrosine kinases (RTKs) are important regulators of signaling in normal cells that can frequently be disrupted in cancer. The adrenal tumor pheochromocytoma (PCC) can be caused by activating mutations of the rearranged during transfection (RET) receptor tyrosine kinase, or inactivation of TMEM127, a transmembrane tumor suppressor implicated in trafficking of endosomal cargos. However, the role of aberrant receptor trafficking in PCC is not well understood. Here, we show that loss of TMEM127 causes wildtype RET protein accumulation on the cell surface, where increased receptor density facilitates constitutive ligand-independent activity and downstream signaling, driving cell proliferation. Loss of TMEM127 altered normal cell membrane organization and recruitment and stabilization of membrane protein complexes, impaired assembly, and maturation of clathrin-coated pits, and reduced internalization and degradation of cell surface RET. In addition to RTKs, TMEM127 depletion also promoted surface accumulation of several other transmembrane proteins, suggesting it may cause global defects in surface protein activity and function. Together, our data identify TMEM127 as an important determinant of membrane organization including membrane protein diffusability and protein complex assembly and provide a novel paradigm for oncogenesis in PCC where altered membrane dynamics promotes cell surface accumulation and constitutive activity of growth factor receptors to drive aberrant signaling and promote transformation.

Migration of confined micro-swimmers subject to anisotropic diffusion

Shear-induced migration of elongated micro-swimmers exhibiting anisotropic Brownian diffusion at a population scale is investigated analytically in this work. We analyse the steady motion of confined ellipsoidal micro-swimmers subject to coupled diffusion in a general setting within a continuum homogenisation framework, as an extension of existing studies on macro-transport processes, by allowing for the direct coupling of convection and diffusion in local and global spaces. The analytical solutions are validated successfully by comparison with numerical results from Monte Carlo simulations. Subsequently, we demonstrate from the probability perspective that symmetric actuation does not yield net vertical polarisation in a horizontal flow, unless non-spherical shapes, external fields or direct coupling effects are harnessed to generate steady locomotion. Coupled diffusivities modify remarkably the drift velocity and vertical migration of motile micro-swimmers exposed to fluid shear. The interplay between stochastic swimming and preferential alignment could explain the diverse concentration and orientation distributions, including rheological formations of depletion layers, centreline focusing and surface accumulation. Results of the analytical study shed light on unravelling peculiar self-propulsion strategies and dispersion dynamics in active-matter systems, with implications for various transport problems arising from the fluctuating shape, size and other external or inter-particle interactions of swimmers in confined environments.

Highly sensitive refractive index sensing based on nanostructured porous silicon interferometers

In this study, we present the experimental evidence demonstrating the utility of electrical double layer (EDL)-induced ion accumulation, using sodium (Na+) ion in water as model substances, on a negatively charged nanostructured surface, specifically thermally grown silicon dioxide (SiO2). This novel approach, termed Ion Surface Accumulation (ISA), aims to enhance the performance of nanostructured porous silicon (PSi) interferometers in optical refractometric applications. The experimental results show that the electrical double layer-induced ion surface accumulation (EDL-ISA) on oxidized PSi interferometers enables remarkable amplification of the interferometer output signal (the spectral interferogram), even when the bulk refractive index variation is below 10-3 RIU. This substantial signal enhancement translates into an increase in sensitivity of up to two orders of magnitude, facilitating the reliable measurement of refractive index variations with both a detection limit (DL) and resolution (R) as low as 10-4 RIU. This achievement elevates the performance of PSi interferometers in photonics and plasmonics-based refractive index platforms.