During a broad molecular taxonomic and phylogenetic survey of the gastropod superfamily Conoidea, 80 specimens of several species of the genus Gemmuloborsonia were sequenced for the cytochrome c oxidase subunit I gene. The genus, originally established for fossil species from the Plio-Pleistocene of the Philippines, now includes living species from bathyal depths of the Indo-Pacific Oceans. The molecular data demonstrated the presence of five separate entities, while only four ‘morphospecies’ could be isolated by visual examination. The two largest groups, representing separate species from the molecular data, were impossible to distinguish with certainty using shell or anatomical characters. To examine shell morphology in more detail the shape of the last whorl was analysed by Fourier analysis, and the Fourier coordinates were used in canonical variate analysis. The majority of the specimens were separated into two groups, but 21.6% of the specimens were impossible to distinguish by morphological characters. One of these two forms was attributed to the known species Gemmuloborsonia moosaiSysoev & Bouchet, 1996, while the other is described as a new species Gemmuloborsonia clandestina. Bathytoma colorataSysoev & Bouchet, 2001 is transferred to Gemmuloborsonia on the basis of molecular analysis and radular morphology. Another species, represented in our material by a single specimen, remains undescribed.
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