Sufficient Phosphate Research Articles

Three-dimensional, multi-functionalized nanocellulose/alginate hydrogel for efficient and selective phosphate scavenging: Optimization, performance, and in-depth mechanisms.

Challenges in developing adsorbents with sufficient phosphate (P) adsorption capacity, selectivity, and regeneration properties remain to be addressed. Herein, a multi-functionalized high-capacity nanocellulose/alginate hydrogel (La-NCF/SA-PEI [La: lanthanum, NCF: nanocellulose fiber, SA: sodium alginate, PEI: polyethyleneimine]) was prepared through environmentally friendly methods. The La-NCF/SA-PEI hydrogel, featuring a 3D porous structure with interwoven functional groups (amino, quaternary ammonium, and lanthanum), demonstrated a maximum P adsorption capacity of 78.0mg/g, exceeding most La-based hydrogel adsorbents. The kinetic and isotherm fitting results confirmed the multilayer chemisorption process. Comprehensive experimental results, instrumental analysis, and computational results revealed that the ammonium phosphate complex (NH3+-O-P) and the inner-sphere complex (La-O-P) formed by La(OH)3 dominated the selective P adsorption process. Density-functional theory (DFT) was employed to calculate the bond length between phosphate and each component of the La-NCF/SA-PEI. The calculation results revealed the double-bridge adsorption between the N (apex) atom on La-NCF/SA-PEI and the O (apex) atomic site in phosphate, including electrostatic adsorption and two hydrogen bonds (bond lengths 1.001 and 1.008Å) between the O of PO43- and the H+ of the protonated amino group. Except the remarkable P adsorption performance (both municipal sewage and aquaculture tail water), the La-NCF/SA-PEI hydrogel's high selectivity toward P, environmental compatibility, and easy separability from water underscore its significant potential for phosphate-contaminated water remediation. The multi-functionalized La-NCF/SA-PEI demonstrate promising potential for P removal applications and advanced the development of sustainable, biomass-based adsorbents design.

Biogenic “phosphorus” effect of terrestrial lakes and its significance to oil shale during the Carnian period in the late Triassic

The Triassic lacustrine organic-rich shale (LORS) in Member 7 of the Yanchang Formation (Carnian stage) in the southern Ordos Basin is relatively well developed. Additionally, its organic matter abundance, lake biomass and biodiversity, exceed the maximum values of the other strata deposited during the same period. Apatite is one of the most important minerals and is closely related to biological activities. However, the types and genesis of the continental sedimentary apatite and its significance to shale oil are not clear. Here, the stratigraphy, petrology, and sedimentology of the phosphorus-bearing rock series in the Ma Quan section are studied and its sedimentary environment and phosphorus formation are discussed. The current research shows that apatite in the study area can be divided into three categories: collophanite, bone fossils, and spherical microfossils. These three types of biogenic “phosphorus” products provide effective records of the transformation of the biological substances into sedimentary organic matter. There are two main formation mechanisms: the direct action of organisms and the interaction between the organisms. Bone fossils and spherical microfossils are formed by the direct action of organisms, while collophanite is formed by the indirect action of organisms. The phosphatization methods of the organisms mainly include “coating”, “replacement”, and “filling”, and the presence of a ubiquitous phosphate filler potentially reflects a sufficient phosphate supply. Apatite also is highly important for the development of organic matter in oil shale. First, it changes the productivity conditions. Second, the apatite in the shell of spherical microfossils has a certain protective effect on the organic matter in the inner cavity. In the current study, the geological processes of collophanite deposition and mineralization are explained, an important basis for prospecting phosphate resources is provided, and a new field for the study of the organic matter enrichment mechanism of source rocks is established. At the same time, the process of lake biogenic phosphorus formation provides evidence from the continental deposits in the eastern margin of the Tethys region for exploring deep global changes.

Phosphorous accumulation associated with mitochondrial PHT3-mediated enhanced arsenate tolerance in Chlamydomonas reinhardtii

Arsenate is a highly toxic element and excessive accumulation of arsenic in the aquatic environment easily triggers a problem threatening the ecological health. Phytoremediation has been widely explored as a method to alleviate As contamination. Here, the green algae, Chlamydomonas reinhardtii was investigated by profiling the accumulation of arsenate and phosphorus, which share the same uptake pathway, in response to arsenic stress. Both C. reinhardtii wild type C30 and the Crpht3 mutant were cultured under arsenic stress, and demonstrated a similar growth phenotype under limited phosphate supply. Sufficient phosphate obviously increased the uptake of polyphosphate and intercellular phosphate in the Crpht3 mutant, which increased the arsenic tolerance of the Crpht3 mutant under stress from 500 µmol L−1 As(V). Upregulation of the PHT3 gene in the Crpht3 mutant increased accumulation of phosphate in the cytoplasm under arsenate stress, which triggered a regulatory role for the differentially expressed genes that mediated improvement of the glutathione redox cycle, antioxidant activity and detoxification. While the wild type C30 showed weak arsenate tolerance because of little phosphate accumulation. These results suggest that the enhanced arsenic tolerance of the Crpht3 mutant is regulated by the PHT3 gene mediation. This study provides insight onto the responsive mechanisms of the PHT3 gene-mediated in alleviating arsenic toxicity in plants.

Biogeochemical explanations for the world’s most phosphate-rich lake, an origin-of-life analog

Environmental phosphate concentrations are typically much lower (~10−6 M) than needed for prebiotic phosphorylation of nucleosides, critical for the origin of life. Here, we tested hypotheses explaining highly concentrated dissolved phosphate in carbonate-rich “soda” lakes by examining phosphorus and nitrogen cycling in Last Chance Lake and Goodenough Lake, Canada. We find a lack of geochemical phosphorus precipitation, that sedimentary calcium is in dolomite rather than apatite, and that N2-fixation rates, probably suppressed by high salinity, are too low to create significant biological phosphate demand. Thus, nitrogen-limitation of biological production and precipitation of calcium-rich carbonate instead of apatite combine to allow unimpeded evaporative phosphate buildup in Last Chance Lake to the highest known natural levels (37 mM) due to small biological and geochemical phosphorus sinks. Forming on basaltic rock, which was likely common on early Earth, evaporative soda lakes were consequently plausible origin-of-life settings with sufficient phosphate for prebiotic synthesis.

β-TCP from 3D-printed composite scaffolds acts as an effective phosphate source during osteogenic differentiation of human mesenchymal stromal cells.

Introduction: Human bone marrow-derived mesenchymal stromal cells (hBM-MSCs) are often combined with calcium phosphate (CaP)-based 3D-printed scaffolds with the goal of creating a bone substitute that can repair segmental bone defects. In vitro, the induction of osteogenic differentiation traditionally requires, among other supplements, the addition of β-glycerophosphate (BGP), which acts as a phosphate source. The aim of this study is to investigate whether phosphate contained within the 3D-printed scaffolds can effectively be used as a phosphate source during hBM-MSC in vitro osteogenesis. Methods: hBM-MSCs are cultured on 3D-printed discs composed of poly (lactic-co-glycolic acid) (PLGA) and β-tricalcium phosphate (β-TCP) for 28 days under osteogenic conditions, with and without the supplementation of BGP. The effects of BGP removal on various cellular parameters, including cell metabolic activity, alkaline phosphatase (ALP) presence and activity, proliferation, osteogenic gene expression, levels of free phosphate in the media and mineralisation, are assessed. Results: The removal of exogenous BGP increases cell metabolic activity, ALP activity, proliferation, and gene expression of matrix-related (COL1A1, IBSP, SPP1), transcriptional (SP7, RUNX2/SOX9, PPARγ) and phosphate-related (ALPL, ENPP1, ANKH, PHOSPHO1) markers in a donor dependent manner. BGP removal leads to decreased free phosphate concentration in the media and maintained of mineral deposition staining. Discussion: Our findings demonstrate the detrimental impact of exogenous BGP on hBM-MSCs cultured on a phosphate-based material and propose β-TCP embedded within 3D-printed scaffold as a sufficient phosphate source for hBM-MSCs during osteogenesis. The presented study provides novel insights into the interaction of hBM-MSCs with 3D-printed CaP based materials, an essential aspect for the advancement of bone tissue engineering strategies aimed at repairing segmental defects.

A new sampling method with zirconium‐loaded resin for phosphate oxygen isotope analysis in oligotrophic freshwater systems

The phosphate oxygen isotope ratio ( ) is a useful technique to trace the sources and biogeochemical cycles of phosphorus (P) in aquatic ecosystems. However, has not been widely used in oligotrophic freshwater systems due to technical and methodological difficulties in collecting sufficient phosphate (PO4 ) for the analysis, which sometimes requires hundreds of liters of the water sample. In this study, a new approach (PaS-Zir) was developed for the analysis in oligotrophic freshwater systems using zirconium (Zr)-loaded (ZrIRC) resin, which has a high affinity for PO4 . ZrClO2 was added to Amberlite IRC748 to obtain the ZrIRC resin. The adsorption/desorption experiment using KH2 PO4 with a known value of was conducted to determine the adsorption/desorption properties of the resin and the likelihood of isotopic fractionation. By installing mesh bags filled with the resin, the PaS-Zir approach was used in two rivers with low PO4 concentrations (0.2 and 5.3μmol/L). A conventional sampling method was also performed in the study river with a higher PO4 concentration to validate the efficacy of the PaS-Zir method. The adsorption/desorption experiment demonstrated that the ZrIRC resin possessed a sufficient adsorption capacity (153 μmol/resin-mL) and exhibited little isotopic fractionation during the adsorption/desorption processes. Using the PaS-Zir method, we were able to collect sufficient PO4 samples for the analysis from the rivers within at least 4 days of mesh bag installation. The values (14.2‰ ±0.2‰) obtained using the PaS-Zir method were comparable to those obtained using the conventional method (14.0‰ ±0.03‰). We proved that the PaS-Zir method is applicable to oligotrophic freshwater systems and is generally more efficient than the conventional method. In addition, our method is useful for improving the understanding of the P dynamics of oligotrophic ecosystems because of the extremely low concentration of PO4 commonly found in them, which are often prone to P pollution.

Effects of Root Zone Warming on Maize Seedling Growth and Photosynthetic Characteristics Under Different Phosphorus Levels.

Phosphorus content and root zone temperature are two major environmental factors affecting maize growth. Both low phosphorus and root zone high temperature stress significantly affect the growth of maize, but the comprehensive effects of phosphorus deficiency and root zone warming are less studied. This study aimed to explore the effects of phosphorus deficiency and root zone warming on the root absorption capacity, total phosphorus content, and photosynthetic fluorescence parameters of maize seedlings. The results showed that maize shoots and roots had different responses to root zone warming and phosphorus deficiency. Properly increasing the root zone temperature was beneficial to the growth of maize seedlings, but when the root zone temperature was too high, it significantly affected the root and shoot development of maize seedlings. The root zone warming had a more significant impact on the root system, while phosphorus deficiency had a greater impact on the shoots. Phosphorus content and root zone warming had a strong interaction. Under the comprehensive influence of normal phosphorus supply and medium temperature in the root zone, the growth of maize seedlings was the best. Under the combined effects of low phosphorus and high temperature in the root zone, the growth was the worst. Compared with the combination of normal phosphorus and root zone medium temperature treatment, the dry mass of the low-phosphorus root zone high temperature treatment was decreased by 55.80%. Under the condition of low-phosphorus too high root zone temperature reduced root vitality, plant phosphorus content, which in turn affected plant growth and light energy utilization efficiency. In the case of sufficient phosphate fertilizer supply, appropriately increasing the soil temperature in the root zone is beneficial to increase the absorption and utilization of phosphorus by plants and promote the growth and development of maize seedlings.

Use of biochar as a possible means of minimizing phosphate fixation and external P requirement of acidic soil

Phosphate fixation is a main factor limiting phosphate availability and reducing crop production in acidic soils. Although biochar addition has been suggested as a means of ameliorating acidic soils, questions remain about the impacts of biochar on phosphate fixation and availability in these soils. To address these questions, a biochar produced from sugarcane bagasse was added at four different levels (0, 1, 3, and 6% w/w) to an acidic soil. After 30 days of incubation, comparisons were made between the chemical properties of the biochar-amended soils and those of the original one. Sorption isotherm experiments were also conducted to estimate soil phosphate sorption capacity and affinity parameters under biochar amendment. Results showed that biochar application improved such soil chemical properties as pH and cation exchange capacity as well as exchangeable calcium, magnesium, sodium, and potassium cations. Biochar was also observed to increase phosphate sorption capacity of the soil but reduce its phosphate sorption strength, indicating that biochar-amended soils were potentially able to fix lower amounts of phosphate than the original acidic soil was. Moreover, soil phosphate buffering capacity indices decreased as a result of biochar incorporation, indicating the easier release of phosphate from the solid to the solution phase in biochar-amended soils. Biochar addition was also observed to reduce effectively (up to 62%) the standard phosphorus requirement of the soil. In conclusion, biochar amendment was found to induce positive changes in phosphate sorption properties of acidic soils, thereby providing conditions more favorable to plant growth through sufficient phosphate availability.

The Apocarotenoid Zaxinone Is a Positive Regulator of Strigolactone and Abscisic Acid Biosynthesis in Arabidopsis Roots.

Carotenoids are ubiquitous precursors of important metabolites including hormones, such as strigolactones (SLs) and abscisic acid (ABA), and signaling and regulatory molecules, such as the recently discovered zaxinone. Strigolactones and ABA are key regulators of plant growth and development, adaptation to environmental changes and response to biotic and abiotic stress. Previously, we have shown that zaxinone, an apocarotenoid produced in rice by the enzyme zaxinone synthase (ZAS) that is common in mycorrhizal plants, is required for normal rice growth and development, and a negative regulator of SL biosynthesis. Zaxinone is also formed in Arabidopsis, which lacks ZAS, via an unknown route. In the present study, we investigated the biological activity of zaxinone in Arabidopsis, focusing on its effect on SL and ABA biosynthesis. For this purpose, we quantified the content of both hormones and determined the levels of related transcripts in Arabidopsis (Arabidopsis thaliana), roots upon zaxinone treatment. For SL quantification, we also employed Striga seed germination bioassay. Results obtained show that zaxinone application to hydroponically grown Arabidopsis seedlings enhanced transcript levels of key biosynthetic genes of both hormones, led to higher root ABA and SL (methyl carlactonoate, MeCLA) content, and increased SL release, even under sufficient phosphate supply. Using the SL insensitive (max2-1) and the ABA deficient (aba1-6, aba2-1, and nced3) mutants, we also show that zaxinone application reduced hypocotyl growth and that this effect is caused by increasing ABA content. Our results suggest that zaxinone is a regulatory metabolite also in Arabidopsis, which triggers the biosynthesis of both carotenoid-derived hormones, SLs and ABA, in roots. In the non-mycotrophic plant Arabidopsis, zaxinone does not increase growth and may be perceived as a stress signal, while it acts as a growth-promoting metabolite and suppressor of SL biosynthesis in rice.

Phosphorus Depletion as a Green Alternative to Biocides for Controlling Biodegradation of Metalworking Fluids.

Metalworking fluids (MWFs) are used as lubricants and coolants in the manufacturing operations. Their biodeterioration, while in operation, is a widespread problem leading to poor performance and worker health issues. Adding biocides, though effective in reducing microbial growth, leads to the production of more recalcitrant wastewaters that are difficult to dispose or recycle on-site. Increasing environmental concerns have led to robust legislation for reducing/eliminating the use of toxic biocides in MWFs, stimulating a growing interest in the development/application of alternative biological preservation strategies. In this study, inducing nutrient imbalance was investigated for controlling microbial growth in MWFs. Phosphorus was immobilized employing insoluble La2O3 to form LaPO4. Concentrations of La2O3 greater than 0.08%w (%w = weight percent) completely inhibited microbial growth (from 1.4 × 107 to 0 CFU/mL) and hindered biodegradation. Raman spectroscopy suggested that La2O3 converted intracellular phosphorus into LaPO4. The growth inhibition potentials of both 0.06%w La(NO3)3 and La2O3 were found to be superior to formaldehyde. The antimicrobial property of La2O3 (i.e., inhibition) was tenable by adding sufficient phosphate, acting as an on/off switch for controlling microbial growth in MWFs. This technology offers the potential to reduce/eliminate the use of biocides in MWFs, improves the feasibility of end-of-life biological treatment, and closes the water loop.

Genome-wide analysis of miRNAs and Tasi-RNAs in Zea mays in response to phosphate deficiency.

Globally important cereal crop maize provides important nutritions and starch in dietary foods. Low phosphate (LPi) availability in the soil frequently limits the maize quality and yield across the world. Small non-coding RNAs (Snc-RNAs) play crucial roles in growth and adaptation of plants to the environment. Snc-RNAs like microRNAs (miRs) and trans-acting small interfering RNAs (Tasi-Rs) play important functions in posttranscriptional regulation of gene expression, which controls plant development, reproduction, and biotic/abiotic stress responses. In order to identify the miR and Tasi-R alterations in leaf and root of maize in response to sufficient phosphate and LPi at 3LS and 4LS, the snc-RNA population libraries for 0th, 1st, 2nd, 4th, and 8th day were constructed. These libraries were used for genome-wide alignment and RNA-fold analysis for possible prediction of potential miRs and Tasi-Rs. This study reported 174 known and conserved differentially expressed miRs of 27 miR families of maize plant. In addition, leaf and root specific potential novel miRs representing 155 new families were also discovered. Differentially expressed conserved as well as novel miR functions in root and leaf during early stage of Pi starvation were extensively discussed. Leaf and root specific miRs as well as common miRs with their target genes, participating in different biological, cellular, and metabolic processes were explored. Further, four miR390-directed Tasi-Rs which belong to TAS3 gene family along with other orthologs of Tasi-Rs were also identified. Finally, the study provides an insight into the composite regulatory mechanism of miRs in maize in response to Pi deficiency.

Medium factors on anaerobic production of rhamnolipids by Pseudomonas aeruginosa SG and a simplifying medium for in situ microbial enhanced oil recovery applications.

Aerobic production of rhamnolipid by Pseudomonas aeruginosa was extensively studied. But effect of medium composition on anaerobic production of rhamnolipid by P. aeruginosa was unknown. A simplifying medium facilitating anaerobic production of rhamnolipid is urgently needed for in situ microbial enhanced oil recovery (MEOR). Medium factors affecting anaerobic production of rhamnolipid were investigated using P. aeruginosa SG (Genbank accession number KJ995745). Medium composition for anaerobic production of rhamnolipid by P. aeruginosa is different from that for aerobic production of rhamnolipid. Both hydrophobic substrate and organic nitrogen inhibited rhamnolipid production under anaerobic conditions. Glycerol and nitrate were the best carbon and nitrogen source. The commonly used N limitation under aerobic conditions was not conducive to rhamnolipid production under anaerobic conditions because the initial cell growth demanded enough nitrate for anaerobic respiration. But rhamnolipid was also fast accumulated under nitrogen starvation conditions. Sufficient phosphate was needed for anaerobic production of rhamnolipid. SO4(2-) and Mg(2+) are required for anaerobic production of rhamnolipid. Results will contribute to isolation bacteria strains which can anaerobically produce rhamnolipid and medium optimization for anaerobic production of rhamnolipid. Based on medium optimization by response surface methodology and ions composition of reservoir formation water, a simplifying medium containing 70.3 g/l glycerol, 5.25 g/l NaNO3, 5.49 g/l KH2PO4, 6.9 g/l K2HPO4·3H2O and 0.40 g/l MgSO4 was designed. Using the simplifying medium, 630 mg/l of rhamnolipid was produced by SG, and the anaerobic culture emulsified crude oil to EI24 = 82.5 %. The simplifying medium was promising for in situ MEOR applications.

Arabidopsis RING E3 ubiquitin ligase AtATL80 is negatively involved in phosphate mobilization and cold stress response in sufficient phosphate growth conditions

Phosphate (Pi) remobilization in plants is critical to continuous growth and development. AtATL80 is a plasma membrane (PM)-localized RING E3 ubiquitin (Ub) ligase that belongs to the Arabidopsis Tóxicos en Levadura (ATL) family. AtATL80 was upregulated by long-term low Pi (0–0.02 mM KH2PO4) conditions in Arabidopsis seedlings. AtATL80-overexpressing transgenic Arabidopsis plants (35S:AtATL80-sGFP) displayed increased phosphorus (P) accumulation in the shoots and lower biomass, as well as reduced P-utilization efficiency (PUE) under high Pi (1 mM KH2PO4) conditions compared to wild-type plants. The loss-of-function atatl80 mutant line exhibited opposite phenotypic traits. The atatl80 mutant line bolted earlier than wild-type plants, whereas AtATL80-overexpressors bloomed significantly later and produced lower seed yields than wild-type plants under high Pi conditions. Thus, AtATL80 is negatively correlated not only with P content and PUE, but also with biomass and seed yield in Arabidopsis. In addition, AtATL80-overexpressors were significantly more sensitive to cold stress than wild-type plants, while the atatl80 mutant line exhibited an increased tolerance to cold stress. Taken together, our results suggest that AtATL80, a PM-localized ATL-type RING E3 Ub ligase, participates in the Pi mobilization and cold stress response as a negative factor in Arabidopsis.

MiR171h restricts root symbioses and shows like its target NSP2 a complex transcriptional regulation in Medicago truncatula.

BackgroundLegumes have the unique capability to undergo root nodule and arbuscular mycorrhizal symbiosis. Both types of root endosymbiosis are regulated by NSP2, which is a target of microRNA171h (miR171h). Although, recent data implies that miR171h specifically restricts arbuscular mycorrhizal symbiosis in the root elongation zone of Medicago truncatula roots, there is limited knowledge available about the spatio-temporal regulation of miR171h expression at different physiological and symbiotic conditions.ResultsWe show that miR171h is functionally expressed from an unusual long primary transcript, previously predicted to encode two identical miR171h strands. Both miR171h and NSP2 transcripts display a complex regulation pattern, which involves the symbiotic status and the fertilization regime of the plant. Quantitative Real-time PCR revealed that miR171h and NSP2 transcript levels show a clear anti-correlation in all tested conditions except in mycorrhizal roots, where NSP2 transcript levels were induced despite of an increased miR171h expression. This was also supported by a clear correlation of transcript levels of NSP2 and MtPt4, a phosphate transporter specifically expressed in a functional AM symbiosis. MiR171h is strongly induced in plants growing in sufficient phosphate conditions, which we demonstrate to be independent of the CRE1 signaling pathway and which is also not required for transcriptional induction of NSP2 in mycorrhizal roots. In situ hybridization and promoter activity analysis of both genes confirmed the complex regulation involving the symbiotic status, P and N nutrition, where both genes show a mainly mutual exclusive expression pattern. Overexpression of miR171h in M. truncatula roots led to a reduction in mycorrhizal colonization and to a reduced nodulation by Sinorhizobium meliloti.ConclusionThe spatio-temporal expression of miR171h and NSP2 is tightly linked to the nutritional status of the plant and, together with the results from the overexpression analysis, points to an important function of miR171h to integrate the nutrient homeostasis in order to safeguard the expression domain of NSP2 during both, arbuscular mycorrhizal and root nodule symbiosis.

Copper tolerance mediated by polyphosphate degradation and low-affinity inorganic phosphate transport system in Escherichia coli

BackgroundMetal tolerance in bacteria has been related to polyP in a model in which heavy metals stimulate the polymer hydrolysis, forming metal-phosphate complexes that are exported. As previously described in our laboratory, Escherichia coli cells grown in media containing a phosphate concentration >37 mM maintained an unusually high polyphosphate (polyP) level in stationary phase. The aim of the present work was to evaluate the influence of polyP levels as the involvement of low-affinity inorganic phosphate transport (Pit) system in E. coli copper tolerance.ResultsPolyP levels were modulated by the media phosphate concentration and/or using mutants in polyP metabolism. Stationary phase wild-type cells grown in high phosphate medium were significantly more tolerant to copper than those grown in sufficient phosphate medium. Copper addition to tolerant cells induced polyP degradation by PPX (an exopolyphosphatase), phosphate efflux and membrane polarization. ppk−ppx− (unable to synthesize/degrade polyP), ppx− (unable to degrade polyP) and Pit system mutants were highly sensitive to metal even in high phosphate media. In exponential phase, CopA and polyP-Pit system would act simultaneously to detoxify the metal or one could be sufficient to safeguard the absence of the other.ConclusionsOur results support a mechanism for copper detoxification in exponential and stationary phases of E. coli, involving Pit system and degradation of polyP. Data reflect the importance of the environmental phosphate concentration in the regulation of the microbial physiological state.

Expression pattern and subcellular localization of Arabidopsis purple acid phosphatase AtPAP9

Purple acid phosphatase (PAP; EC 3.1.3.2) enzymes are metallophosphoesterases that hydrolysis phosphate ester bonds in a wide range of substrates. Twenty-nine PAP-encoding loci have been identified in the Arabidopsis genome, many of which have multiple transcript variants expressed in response to diverse environmental conditions. Having analyzed T-DNA insertion mutants, we have provided strong pieces of evidence that AtPAP9 locus encodes at least two types of transcripts, designated as AtPAP9-1 and AtPAP9-2. These transcript variants expressed distinctly during the course of growth in medium containing sufficient phosphate or none. Further histochemical analysis by the use of AtPAP9-1 promoter fused to β-glucuronidase reporter gene indicated the expression of this gene is regulated in a tissue-specific manner. AtPAP9-1 was highly expressed in stipule and vascular tissue, particularly in response to fungal infection. Subcellular localization of AtPAP9-1:green fluorescent fusion protein showed that it must be involved in plasma membrane and cell wall adhesion.

Indispensable or toxic? The phosphate versus arsenate debate

Indispensable or toxic? The phosphate versus arsenate debate

Polyphosphate degradation in stationary phase triggers biofilm formation via LuxS quorum sensing system in Escherichia coli.

In most natural environments, association with a surface in a structure known as biofilm is the prevailing microbial life-style of bacteria. Polyphosphate (polyP), an ubiquitous linear polymer of hundreds of orthophosphate residues, has a crucial role in stress responses, stationary-phase survival, and it was associated to bacterial biofilm formation and production of virulence factors. In previous work, we have shown that Escherichia coli cells grown in media containing a critical phosphate concentration >37 mM maintained an unusual high polyP level in stationary phase. The aim of the present work was to analyze if fluctuations in polyP levels in stationary phase affect biofilm formation capacity in E. coli. Polymer levels were modulated by the media phosphate concentration or using mutant strains in polyP metabolism. Cells grown in media containing phosphate concentrations higher than 25 mM were defective in biofilm formation. Besides, there was a disassembly of 24 h preformed biofilm by the addition of high phosphate concentration to the medium. These phenotypes were related to the maintenance or re-synthesis of polyP in stationary phase in static conditions. No biofilm formation was observed in ppk−ppx− or ppk−ppx−/ppk+ strains, deficient in polyP synthesis and hydrolysis, respectively. luxS and lsrK mutants, impaired in autoinducer-2 quorum sensing signal metabolism, were unable to form biofilm unless conditioned media from stationary phase wild type cells grown in low phosphate were used. We conclude that polyP degradation is required for biofilm formation in sufficient phosphate media, activating or triggering the production of autoinducer-2. According to our results, phosphate concentration of the culture media should be carefully considered in bacterial adhesion and virulence studies.

Diverse control of metabolism and other cellular processes in Streptomyces coelicolor by the PhoP transcription factor: genome-wide identification of in vivo targets

Streptomycetes sense and respond to the stress of phosphate starvation via the two-component PhoR–PhoP signal transduction system. To identify the in vivo targets of PhoP we have undertaken a chromatin-immunoprecipitation-on-microarray analysis of wild-type and phoP mutant cultures and, in parallel, have quantified their transcriptomes. Most (ca. 80%) of the previously in vitro characterized PhoP targets were identified in this study among several hundred other putative novel PhoP targets. In addition to activating genes for phosphate scavenging systems PhoP was shown to target two gene clusters for cell wall/extracellular polymer biosynthesis. Furthermore PhoP was found to repress an unprecedented range of pathways upon entering phosphate limitation including nitrogen assimilation, oxidative phosphorylation, nucleotide biosynthesis and glycogen catabolism. Moreover, PhoP was shown to target many key genes involved in antibiotic production and morphological differentiation, including afsS, atrA, bldA, bldC, bldD, bldK, bldM, cdaR, cdgA, cdgB and scbR-scbA. Intriguingly, in the PhoP-dependent cpk polyketide gene cluster, PhoP accumulates substantially at three specific sites within the giant polyketide synthase-encoding genes. This study suggests that, following phosphate limitation, Streptomyces coelicolor PhoP functions as a ‘master’ regulator, suppressing central metabolism, secondary metabolism and developmental pathways until sufficient phosphate is salvaged to support further growth and, ultimately, morphological development.

Phosphate starvation of maize inhibits lateral root formation and alters gene expression in the lateral root primordium zone.

BackgroundPhosphorus (P) is an essential macronutrient for all living organisms. Maize (Zea mays) is an important human food, animal feed and energy crop throughout the world, and enormous quantities of phosphate fertilizer are required for maize cultivation. Thus, it is important to improve the efficiency of the use of phosphate fertilizer for maize.ResultsIn this study, we analyzed the maize root response to phosphate starvation and performed a transcriptomic analysis of the 1.0-1.5 cm lateral root primordium zone. In the growth of plants, the root-to-shoot ratio (R/L) was reduced in both low-phosphate (LP) and sufficient-phosphate (SP) solutions, but the ratio (R/L) exhibited by the plants in the LP solution was higher than that of the SP plants. The growth of primary roots was slightly promoted after 6 days of phosphate starvation, whereas the numbers of lateral roots and lateral root primordia were significantly reduced, and these differences were increased when associated with the stress caused by phosphate starvation. Among the results of a transcriptomic analysis of the maize lateral root primordium zone, there were two highlights: 1) auxin signaling participated in the response and the modification of root morphology under low-phosphate conditions, which may occur via local concentration changes due to the biosynthesis and transport of auxin, and LOB domain proteins may be an intermediary between auxin signaling and root morphology; and 2) the observed retardation of lateral root development was the result of co-regulation of DNA replication, transcription, protein synthesis and degradation and cell growth.ConclusionsThese results indicated that maize roots show a different growth pattern than Arabidopsis under low-phosphate conditions, as the latter species has been observed to halt primary root growth when the root tip comes into contact with low-phosphate media. Moreover, our findings enrich our understanding of plant responses to phosphate deficits and of root morphogenesis in maize.