Substrate-induced Respiration Research Articles

Biochar pH reduction using elemental sulfur and biological activation using compost or vermicompost

This study aimed to improve biochar’s quality for arid land applications by using elemental sulfur as a pH reducer agent co-applied with compost or vermicompost as biological activators. Biochar pH was decreased by the addition of elemental sulfur, with the highest reduction from 8.1 to 7.2 occurring when co-amended with vermicompost. Elemental sulfur increased the water-soluble concentrations of calcium, magnesium, and many other elements, and stimulated substrate-induced respiration, especially when co-amended with vermicompost. The bacterial diversity community structure were significantly affected by all treatments. The Shannon index significantly increased in response to compost and sulfur treatments, while the vermicompost treatments showed higher microbial evenness and equitability diversity indices. Multivariate analyses indicated that elemental sulfur oxidation was associated with specific sulfur-oxidizing bacterial clusters. Integrating biochar with sulfur and (vermi)compost was found to be a promising sustainable technology for managing excessive biochar alkalinity, increasing its fertility and potential for application in aridlands.

Effect of tire wear particle accumulation on nitrogen removal and greenhouse gases abatement in bioretention systems: Soil characteristics, microbial community, and functional genes

Tire wear particles (TWPs), as predominant microplastics (MPs) in road runoff, can be captured and retained by bioretention systems (BRS). This study aimed to investigate the effect of TWPs accumulation on nitrogen processes, focusing on soil characteristics, microbial community, and functional genes. Two groups of lab-scale bioretention columns containing TWPs (0 and 100 mg g−1) were established. The removal efficiencies of NH4+-N and TN in BRS significantly decreased by 7.60%–24.79% and 1.98%–11.09%, respectively, during the 101 days of TWPs exposure. Interestingly, the emission fluxes of N2O and CO2 were significantly decreased, while the emission flux of CH4 was substantially increased. Furthermore, prolonged TWPs exposure significantly influenced the contents of soil organic matter (increased by 27.07%) and NH4+-N (decreased by 42.15%) in the planting layer. TWPs exposure also significantly increased dehydrogenase activity and substrate-induced respiration rate, thereby promoting microbial metabolism. Microbial sequencing results revealed that TWPs decreased the relative abundance of nitrifying bacteria (Nitrospira and Nitrosomonas) and denitrifying bacteria (Dechloromonas and Thauera), reducing the nitrification rate by 42.24%. PICRUSt2 analysis further indicated that TWPs changed the relative abundance of functional genes related to nitrogen and enzyme-coding genes.

Study in a long-term laboratory experiment of the potential susceptibility to mineralization of organic matter in post-agrogenic light gray soils

Relevance. Since 2021, work has begun in Russia to assess the fertility of unused arable land and its involvement in agricultural circulation. Changes in the farming system of post-agrogenic soils can lead to uncontrolled mineralization of newly formed soil organic matter (SOM) under fallow vegetation and significant CO2 emissions into the atmosphere. Studies of the nature of SOM accumulation under fallow vegetation and assessment of its potential susceptibility to mineralization are relevant, since they can become the basis for the development of agrotechnical methods for returning unused lands to arable circulation with the maximum preservation of their fertility.Methods. In a long-term laboratory incubation experiment, we studied the dynamics of changes in the intensity of basal (BR) and substrate-induced respiration (SIR) in postagrogenic soils to assess the potential susceptibility to SOM mineralization with a change in land use. Layered samples (0–10 and 10–20 cm) were used from the old arable horizons of two fallow plots with different humus conditions. The results of the incubation experiment were compared with the results of assessing the quantitative content and qualitative composition of SOM.Results. In the 0–10 cm layer, the respiration rates are higher than in the 10–20 cm layer. The results of the assessment of the respiration intensity are consistent with the assessment of the qualitative composition of SOM. The accumulation of SOM occurs mainly in the upper part of postagrogenic soils due to mobile easily oxidized organic compounds of a fulvic nature. When developing agrotechnical methods for returning fallow lands to arable circulation, it is necessary to focus primarily on basic processing technologies that ensure maximum preservation of potentially easily mineralized material accumulated in the upper layer.

Contrasting mechanisms of nutrient mobilization in rhizosphere hotspots driven by straw and biochar amendment

Straw return strategies are widely used green management practices that can alter soil organic matter transformation and dynamics through changes in microbial community structure and functions. How the exogenous input of organic materials of contrasting qualities affects the composition of dominant taxa, growth, and microbial functional properties related to nutrient acquisition in space remains unclear. In this study, we investigated the hotsopts and kinetics of C- and N-acquiring hydrolases, microbial growth, and bacterial community structure in maize rhizosphere hotspots after the addition of straw and straw-derived biochar using soil zymography, substrate-induced respiration and high-throughput sequencing. Compared with no amendment and maize straw-derived biochar, straw addition increased the growing biomass and microbial specific growth rate by 1.2–1.6 and 1.7–2.0-fold, respectively, indicating the relative dominance of fast-growing r-strategists. This corresponds to an increased relative abundance of the keystone taxa Firmicutes and their gene copies encoding β-1,4-glucosidase (BG) and β-N-acetylglucosaminidase (NAG). The potential activity and affinity (Vmax and Km) of BG increased 2.2 and 1.8 times, respectively, and those of NAG increased 4.0 and 2.0 times, respectively. In contrast, the relative abundance of Actinobacteria belonging to K-strategists increased in the biochar-amended soil. This resulted in slower growth and retarded enzymatic activity than the straw return treatment. Biochar enhanced the root biomass by 31% and increased the rhizosphere hotspot extents of BG and NAG by 26% and 47%, respectively. The highest robustness and modularity of the co-occurrence network indicated a more stable network with biochar input. In summary, the addition of straw accelerated rhizosphere nutrient cycling by triggering microbial growth, especially fast-growth r-strategists (Firmicutes), and synthesizing a large number of enzymes. In contrast, the addition of biochar increased rhizosphere nutrient mobilization by expanding the extent of rhizosphere hotspots to mobilize nutrients from a larger soil volume. This suggests that there are different strategies for nutrient mobilization in the rhizosphere with contrasting exogenous C addition.

Non-native and native tree species plantations and seasonality could have substantial impacts on the diversity of indigenous soil fauna in a semi-arid forest ecosystem.

The temporal and spatial dynamics of soil fauna in many terrestrial ecosystems are still not fully understood, while soil fauna is one of the most critical characteristics in assessing soil quality. Therefore, the effects of native [Quercus brantii (QP) and Amygdalus scoparia (AMP)] and non-native [Cupressus arizonica (CUP) and Pinus eldarica (PIN)] plantations and natural trees [Quercus brantii coppice trees (QNC), standard (QNS), and Amygdalus scoparia (AMN)] on diversity and abundance of macro- and mesofauna were done in the semi-arid forest of Zagros, Iran. Samples were collected beneath the canopy of woody species and the outer edge of the canopy in spring and summer seasons. For this purpose, soil samples [(7 samples per woody species + control) × 2 seasons × 3 replicates] were taken from 0 to 20 cm depths. Each soil sample was a mix of three soil cores. For the macrofauna, 15 species belonging to four families (in spring) and 17 species in nine families (in summer) were collected and identified. For the soil mesofauna, 14 species belonging to 14 families (in spring) and 13 species in 13 different families (in summer) were identified, respectively. The fauna diversity indices under the canopy of studied species were higher in summer season than in spring. The result showed that the macrofauna diversity was affected by tree species, while mesofauna was affected by seasonal changes. Macrofauna biodiversity was higher under the canopy of PIN and CUP than other trees. Principle component analysis showed that the diversity of the macrofauna was higher under the canopy of PIN and CUP, and influenced by soil characteristic properties, soil properties did not influence them. Yet the diversity of the mesofauna was affected by soil characteristics and was higher in areas with higher organic carbon, nitrogen, substrate-induced respiration, basal respiration, microbial carbon biomass, and alkaline phosphatase. In addition, mesofauna biodiversity had a significant positive correlation with the soil quality index (SQI). SQI was higher under the canopy of natural stands, especially the QNS. Conservation of native species (QNS, QNC, and AMN) and plantation with native deciduous species (QP and AMP) seem to moderate environmental conditions and increase soil macro- and mesofauna diversity and SQI.

Soil biological activity after a sixty-year fertilization practice in a wheat-maize crop rotation.

This study aimed to survey the long-term effects of fertilization practices on the functional diversity of the soil microbiota. A 60-year fertilization experiment with mineral fertilizers, farmyard manure and combined treatments was sampled in two consecutive years in maize (Zea mays L.) and wheat (Triticum aestivum L.). Soil chemical properties, plant growth and physiological parameters were measured. The MicroRespTM method was applied to assess the community level physiological profiles (CLPPs) of the rhizosphere soil, and the arbuscular mycorrhizal fungal (AMF) colonization of the roots was determined. Samples were taken in the early vegetative stages, at flowering, and at harvest in both years. The measured parameters were analysed using multifactorial ANOVA to determine treatment effects, crop-dependent differences, and seasonality. PCA analysis was performed on the data matrix to reveal more complex correspondences, and Pearson's product-moment correlation was used to confirm relationships between some of the measured soil and plant parameters. Fertilization treatments caused long-term changes in some biological parameters such as: MicroRespTM parameters, citrate utilization, total substrate-induced respiration value, and the ratio of utilization of amino acids and sugars. The rate of AMF colonization responded mainly to the plant nutrition status and the plant requirements, suggesting a plant-mediated effect in the case of mycorrhiza. Mineral nitrogen fertilization and soil acidification were found to be the main factors affecting the catabolic activity of soil microbiota, while AMF colonization responded to the balance of plant nutrition.

The Effect of Mineral Fertilizers on Soil Respiration in Urban Lawns

Application of mineral fertilizers to regulate microbial respiration and carbon dioxide emissions from urban lawn soils was evaluated due to the need to develop technologies for reducing CO2 emissions and for increasing the C-absorption capacity of natural and anthropogenic ecosystems. The studies were performed in the Botanical Garden of Moscow State University on Leninskie Hills in a small-plot experiment with the fractional application of four types of complex fertilizers (NPKS 27 : 6 : 6 : 2, NPKS 21 : 10 : 10 : 2, NPK 15 : 15 : 15 and NPK 18:18:18 + 3 MgO + trace elements (TE)) at the doses of 60 and 120 kg N/ha during the growing season. We studied the basal respiration (BR) of soils, carbon content of microbial biomass (Cmic) by substrate-induced respiration, and the CO2 emission from soils by the method of closed static chambers. Cmic in soil of the control plot in the summer period was 1300–1450 µg/g. Application of NPKS 21 : 10 : 10 : 2 and NPK 18 : 18 : 18 + 3 MgO + TE at a low dose increased Cmic by 12–35% within the first two weeks, and then it dropped. All types of fertilizers applied for a short period of time increased BR of soils and CO2 emission maximum on the sixth day. After two weeks and onwards, their growth decreased or their intensity dropped to the control values (500 mg CO2 m2/h–1 and 1.5 μg C–CO2 g/h, respectively) and lower. The lowest intensity of CO2 emission, a rise in basal respiration, and an increase in microbial biomass were recorded after the application of fertilizer NPKS 21 : 10 : 10 : 2. The change in the functioning of the soil microbial community detected by the maximal qCO2 was the greatest in case of NPKS 27 : 6 : 6 : 2 application. The dynamics of CO2 emission from the soils of the small-plot experiment from April to October correlated with the soil temperature (rS = 0.66, p < 0.05, n = 135). Emissions of CO2 were minimal for the plot with NPKS 21 : 10 : 10 : 2 in all periods of the study.

THE EFFECT OF MINERAL FERTILIZERS ON SOIL RESPIRATION IN URBAN LAWNS

Due to the need to develop technologies for reducing carbon dioxide emissions and increasing the C-absorption capacity of natural and anthropogenic ecosystems, the possibility of using mineral fertilizers to regulate microbial respiration and CO2 emissions from urban lawn soils was evaluated. The studies were carried out on the territory of the Botanical Garden of Moscow State University on the Lenin Hills in a small-plot experiment with the fractional application of four types of complex fertilizers (NPKS 27:6:6:2, NPKS 21:10:10:2, NPK 15:15:15 and NPK 18:18:18 + 3 MgO + trace elements (TE)) at doses of 60 and 120 kg N ha-1 during the growing season. The carbon content of microbial biomass (Cmic) using substrate-induced respiration was studied, the basal respiration (BR) of soils was estimated, and the emission of CO2 from soils using closed static chambers was determined. Тhe Cmic content in the soil of the control plot in the summer period varied within 1300–1450 μg·g-1. The application of NPKS 21:10:10:2 and NPK 18:18:18 + 3 MgO + TE at a low dose increased the Cmic content by 12–35% for two weeks, then it de-creased. The application of all fertilizers for a short period increased basal respiration of soils and CO2 emission, maximum on the 6th day. Aft er two weeks, the increase in the intensity of BR and CO2 emission decreased or it reached the control values (1,5 μg C-CO2·g-1·h-1 and 500 mg·CO2 ·m-2·h-1 respectively) or less. In the short term, the lowest intensity of CO2 emission and a surge in basal respiration, along with an increase in microbial biomass, were observed with the addition of fertilizer NPKS 21:10:10:2. The greatest change in the functioning of the soil microbial community, revealed by the maximum qCO2, occurred with the introduction of NPKS 27:6:6:2. Th e dy-namics of CO2 emission from the soils of the small-plot experiment from April to October correlated with the soil temperature (rS = 0.66, p&lt;0.05, n=135). In all periods of the study, the minimum CO2 emissions were noted for the plot with NPKS 21:10:10:2 fertilizer.

Exploring the Influence of Diverse Viticultural Systems on Soil Health Metrics in the Northern Black Sea Region

The present study investigates the functionalecological status of typical light clay soils in vineyards in the southern region of Crimea, using both traditional (including fallow soils) and organic land-use systems. This analysis was carried out by examining agrochemical indicators, microbial respiratory activity, microbial biomass, and the ecological status of the microbial community. In organic vineyard soils, the mean substrate-induced respiration, microbial biomass carbon and the ratio of microbial biomass to organic carbon were found to be 2.8, 4.0, and 4.1 times higher, respectively, compared to conventional farm soils. On the contrary, the microbial metabolic coefficient was 1.4 times lower, signifying more favorable conditions for the functioning of the soil microbiota. The increased mobile sulfur content in organic vineyard soils (18.3 mg kg−1 vs. 8.0 mg kg−1 in traditional farms) and inadequate mobile phosphorus supply in some farms present potential risks. The suboptimal functional state of the microbiome in fallow soils previously under traditional plant protection necessitates comprehensive ecotoxicological analyses before development. Assessing the soil functional ecological status through an ecophysiological evaluation of the microbiome is vital for understanding ampelocenosis soils and making informed decisions on vineyard management practices.

Interactive effect of biochar and urea addition increases plant growth and rhizosphere microbial activity and decreases N2O emissions

Simultaneous addition of biochar with applied N fertilizer was proposed as useful way how to improve soil fertility and reduce negative effects of nitrogen fertilization. A hypothesis that added N decreases root growth and soil microbial activity and increases N2O emissions while addition of biochar has opposite effect was tested. We further hypothesized that increased microbial activity in biochar-amended soil stimulates growth of subsequently cultivated plants.The supposed interactive effect of biochar and N-fertilizer was studied in pot experiment with cultivation of lettuce in soil amended with urea, biochar and their combination. In each pot, yield of plant biomass was determined and basal respiration, substrate-induced respiration and content of mineral N were determined in soil samples. Soil with roots decomposing after lettuce harvest was also analyzed and subsequently used for the cultivation of wheat plants.Emissions of N2O were measured following N application and measurement continued after harvest. Contrary to the hypothesis, N fertilization stimulated the growth of not only aboveground but also belowground plant biomass. Biochar increased growth of roots in agreement with the hypothesis. The effect of treatments on microbial biomass and respiration was relatively weak in the rhizosphere of growing plants. However, when roots were decomposed, lower Nmin and higher microbial biomass were observed in biochar amended soils. Biochar amendment significantly stimulated the yield of subsequently cultivated wheat. At the beginning of the experiment, N2O emissions were higher in biochar-amended soil. However, at the later phase of the experiment, cumulative emissions were lower in biochar-amended soils. Results suggest that biochar supports more efficient N utilization by plants and increases soil fertility. Biochar also decreases N losses through N2O emissions, even with simultaneous N fertilization.

Humate-Coated Urea as a Tool to Decrease Nitrogen Losses in Soil

Processes of N transformation in soil as affected by application of the three kinds of urea fertilizers, conventional urea (U), humate-coated urea (U_HA), and urea treated with the urease inhibitor NBPT (U_UI), are examined in a model laboratory experiment. Effects of urea fertilizers on soil chemical (content of water-extractable N-NH4 and N-NO3), and microbiological properties (rate of actual and potential N2O emission, basal and substrate-induced respiration, microbial biomass C, emission of ethylene) are focused to answer the following questions: (i) whether humate-coated urea has the ability to decrease N losses in soil; and (ii) how it affects soil biological activity comparable to synthetic urease inhibitor. The results showed that U_HA demonstrated advantages comparable to U in its ability to decrease N losses in soil: it increased N-NH4 content by 35%, reduced nitrate content by 9%, and decreased N2O emissions by 50%. U_HA promoted basal soil respiration by 10% and the specific activity of the soil microbial community by 7%, providing the highest metabolic quotient qCO2. Comparably to NBPT-treated U, U_HA mainly shows intermediate results between U-UI and conventional U. Considering the low cost of raw humates, U-HA can be regarded as a promising tool to decrease N losses in soils.

Soil erosion decreases soil microbial respiration in Japanese beech forests with understory vegetation lost by deer

ABSTRACT Increases in the number of wild herbivores resulted in understory degradation because of their overgrazing in forest ecosystems. Deer overgrazing has occurred soil erosion in Japanese beech forests where dwarf bamboo used to be densely covered. Soil erosion can result in a decrease in soil carbon and nutrient contents, causing the soil microbial respiration in such forest ecosystems to be degraded. The objective of this study was to clarify the effects of soil erosion, which sporadically occurs within the forests, on soil properties and microbial activity. Soil erosion indices, such as the maximum height of exposed roots from the soil surface (MAXH), tree and soil properties, microbial basal and substrate-induced respiration, were measured under the canopy of 16 beech trees in each of three deciduous broadleaved forests on southern Kyushu Island, Japan. Soil properties such as the humus mass and the organic matter contents of soil and humus decreased with MAXH. Basal and substrate-induced respiration decreased with increases in MAXH. Soil properties associated with organic matter increased with basal and substrate-induced respiration. These results suggest that soil surface layers that were rich in organic matter ran off because of soil erosion, resulting in the degradation of soil microbial activity. This study suggests that increases in wild herbivore populations degrade soil ecosystem functioning owing to the soil erosion induced by understory disappearance.

Long-term successive rotation affects soil microbial resource limitation and carbon use efficiency in Chinese fir (Cunninghamia lanceolata) monoculture plantations

Long-term successive rotation has resulted in negative effects on stand productivity, soil nutrient pool and microbial diversity and function in monoculture tree plantations. However, how successive rotation influences soil microbial nutrient limitation and carbon use efficiency (CUE) and their linkage with resource carbon (C): nitrogen (N): phosphorus (P) stoichiometry remain largely unknown. To solve this puzzle, we compared the C:N:P stoichiometries of leaf litter, fine root and soil, as well as microbial biomass and enzyme activities among three Chinese fir (Cunninghamia lanceolata) plantations with first (FRP), second (SRP) and third (TRP) generations and a natural broad-leaved forest (BL). We found that long-term successive rotation of Chinese fir decreased litter biomass by 64.7% ∼ 80.9% and enhanced litter C:N ratio by 2.7% ∼ 36.0% compared to the BL. Successive rotation decreased the contents of dissolved organic C, total N, and soil C:P and N:P ratios, and resulted in an increased C:N imbalance between soil microorganisms and nutrients in the TRP generation. Long-term successive rotation increased microbial C limitation by 1.5% ∼ 11.1% but decreased N and P limitations by 127.3% ∼ 160.9% and 15.3% ∼ 37.5%, compared with the BL, and resulted in significant increases in microbial CUE and substrate-induced respiration rate of C to N sources in the TRP generation. Structural equation modeling suggested that successive rotation indirectly affected microbial CUE and SIR by changing litter C:N, enzyme C:N and soil C:N imbalance. Collectively, these findings indicated that long-term successive rotation aggravated soil microbial C (energy) limitation and affected microbial CUE and capacity due to the increased stoichiometric imbalance between their resources. Future management practices that could increase litter and soil quality could be helpful to decrease microbial C limitation and maintain microbial functionality for sustainable monoculture plantations.

Soil functional indicators in different development stages of an oak (Quercus castaneifolia C.A. Mey.) stand

As the remaining widespread Tertiary forests, the Hyrcanian forest of northern Iran, together with the south-eastern forests of Azerbaijan, are the last habitat ecosystems for chestnut-leaved oak species (Quercus castaneifolia C.A. Mey.) in the world. The present study aimed to investigate the influence of oak forest stands with different development stages (i.e. initial, optimal and decay) on soil functional indicators, i.e. fertility and biological activities, in Loveh forest, northern Iran. During the summer season, a total of 18 forest floor and topsoil samples (30 × 30 × 10 cm) from each development stage were transferred to the laboratory. In order to obtain a temporal pattern of soil climate, biota and microbial characteristics, samples were also collected during the autumn season. Concerning the independent individual factors, including development stage, season, and development stage × season, two-way ANOVA and general linear models as well as a PCA were applied. The first factor explained the observed variations in the total earthworm density (36.3 %) and biomass (33.5 %), acarina (47.3 %), nematodes (52.3 %), protozoa (54.6 %), bacteria (60.9 %), fungi (53.4 %), basal respiration (35.9 %), substrate-induced respiration (37.2 %), microbial biomass C (25.7 %), microbial biomass N (35.4 %), and the ratio of microbial biomass C to microbial biomass N (18.8 %). In contrast, the season factor explained changes in soil water content (31.2 %), temperature (22.6 %) and collembola density (59.7 %). Based on heat plots (as a part of the principal component analysis output) of studied properties, the decay stage of the oak stand created hot spots of soil functional indicators in the study area. Although all forest stand stages of the oak have an important ecological role, and place value in the evolutionary process, the old-growth (i.e. decay) stage is crucial for the soil functions exhibiting the highest fertility and biological relevance. As a management strategy, forest decision-makers may be advised to introduce diverse tree species into the stands, especially in areas with patchy canopy, and thus enhance forest soil microbial activity, nutrient cycles and, finally, variation of soil properties within the area (pedodiversity).

Soil community catabolic profiles for a semiarid reclaimed surface coalmine

ABSTRACT Recovery of soil health offers insights into the mechanisms underpinning the stability of remediated ecosystems. Indirect assessment of enzymatic activity potential using substrate induced respiration (SIR), is commonly used to evaluate changes in soil microbial activity profiles, with their links to environmental and management factors. In this study, community level physiological profiling (CLPP) was employed to assess the impact of time on surface coal mine soil remediation. When compared with an adjoining control site, analysis of CLPP parameters offer useful insights and prospective tools for assessing soil health, following mining and remediation activities.

Understanding the relative contributions of fungi and bacteria led nitrous oxide emissions in an acidic soil amended with industrial waste

Amendment of fertilized arable soil with alkaline industrial waste has the potential to ameliorate soil acidification whilst also improving crop yield. Another co-benefit is nitrous oxide (N2O) emission abatement but the contribution of fungi and bacteria involved in this process remains unclear. Two incubation experiments were conducted to: 1) examine how amendment of acidic soils with a mixture of phosphorus tailings mixture and insoluble potassium-containing rocks (PT) affect N2O emissions and 2) understand the microbial mechanisms and relative contributions of fungi and bacteria responsible for N2O emissions. In the first incubation experiment, the four treatments consisted of: i) the study control, ii) urea, iii) PT amendment and iv) PT amendment plus urea. Results showed that the PT amendment significantly increased soil pH from 4.8 to above 6.0, and reduced N2O emissions by 65.7%. PT-amended soils had higher N2 emissions and faster O2 consumption. The PT amendment significantly increased extracellular enzyme activities of leucine aminopeptidase and N-Acetyl-β-glucosaminidase, while it significantly decreased activities of β-1, 4-glucosidase and β-cellobiosidase. Two antibiotics (cycloheximide and streptomycin) combined with substrate-induced respiration method were used in the second incubation experiment. Compared to soil with urea, urea with PT amendment raised soil bacteria-related N2O from 9.2% to 18.8% while decreasing fungi-related N2O from 50.5% to 43.2%. These findings suggest that the N2O emissions from acidic soils can be considerably mitigated by the application of alkaline industrial wastes. The contribution of fungi should be considered when designing and applying N2O mitigation strategies in acidic soils. Data AvailabilityData will be made available on request.

Fungi contribute more to N2O emissions than bacteria in two paddy soils with different textures

Both bacteria and fungi contribute to nitrous oxide (N2O) emissions through denitrification in soils; however their contributions to N2O emissions in paddy soil with different soil textures are unclear. In this study, N2O emission flux and production potential were determined using the substrate-induced respiration (SIR) inhibition method with or without acetylene addition. Fungi contributed more to N2O emission flux than bacteria in loam and clay soils, and their contribution to N2O production potential was higher than that of bacteria in loam soil. Moreover, the contributions of fungi and bacteria to N2O emission flux and production potential were higher in clay soil than in loam soil. Thus, fungi play a significant role in N2O emissions from paddy soils, which was highly dependent on soil texture. Therefore, the role of fungal denitrification in N2O emission flux in paddy soils should be investigated in future research.

Decrease in Soil Functionalities and Herbs’ Diversity, but Not That of Arbuscular Mycorrhizal Fungi, Linked to Short Fire Interval in Semi-Arid Oak Forest Ecosystem, West Iran

The semi-arid forest ecosystems of western Iran dominated by Quercus brantii are often disturbed by wildfires. Here, we assessed the effects of short fire intervals on the soil properties and community diversity of herbaceous plants and arbuscular mycorrhizal fungi (AMF), as well as the interactions between these ecosystem features. Plots burned once or twice within 10 years were compared to unburned plots over a long time period (control sites). Soil physical properties were not affected by the short fire interval, except bulk density, which increased. Soil geochemical and biological properties were affected by the fires. Soil organic matter and nitrogen concentrations were depleted by two fires. Short intervals impaired microbial respiration, microbial biomass carbon, substrate-induced respiration, and urease enzyme activity. The successive fires affected the AMF's Shannon diversity. The diversity of the herb community increased after one fire and dropped after two, indicating that the whole community structure was altered. Two fires had greater direct than indirect effects on plant and fungal diversity, as well as soil properties. Short-interval fires depleted soil functional properties and reduced herb diversity. With short-interval fires probably fostered by anthropogenic climate change, the functionalities of this semi-arid oak forest could collapse, necessitating fire mitigation.

Effects of micro-climatic conditions on soil properties along a climate gradient in oak forests, west of Iran: Emphasizing phosphatase and urease enzyme activity

Climatic characteristics are among most important factors influence on soil properties. Changes in climatic characteristics could be derived in different scales such as local-scale changes in topographical factors (i.e., slope aspect, known as micro-climate). However, the effects of micro-climate condition on soil properties (especially enzyme activity that are effective on nutrient cycles) along climatic gradient have rarely been investigated in arid and semi-arid forest ecosystems. For this purpose, soil sampling was carried out using 60 composite soil samples in three regions with different climate conditions including slightly-arid, moderately-arid and semi-arid in two slope aspects (north vs. south) in oak forests, western Iran. The results showed that urease and phosphatase enzymes activity significantly varied as a function of climate condition, with humped-shaped patterns through the climate gradient. Soil respiration (R), substrate induced respiration (SIR) and microbial biomass carbon (MBC) simultaneously reflected the influence of the climate condition and slope aspect (p < 0.05). From slightly-arid to semi-arid areas, the soil chemical, biological (R and SIR), and physical (saturation point) properties significantly increased while, soil lime, EC, pH, and silt declined (p < 0.05). Structural equation modelling showed that, the soil's chemical and biological properties were the best mediators for indirect effects of climate condition and slope aspects on soil enzyme activities. The results also revealed that the phosphatase enzyme is indirectly influenced by climatic condition (β = 0.114 and P-value = 0.029) and slope aspect (β = -0.067 and P-value = 0.05), while the urease enzyme was directly and indirectly affected by climate condition and slope aspect, respectively. The principal component analysis indicated that it was easier to separate the climatic region than to separate them based on the slope's aspect. This study suggested that on a large scale, climatic characteristics play a more critical role in changing soil properties. Still, on a small scale, the slope aspect determines changes in soil biology.

Scattered wild pistachio trees profoundly modify soil quality in semi-arid woodlands

Scattered wild pistachio trees (Pistacia atlantica Dest.) support various ecological functions and services, including soil conservation, in semi-arid woodlands of the Irano-Turanian zone, but over-exploitation puts the populations at risk. The current paucity of information precludes a thorough assessment of the effect of wild pistachio trees on soil quality. Therefore, we quantified their role in soil quality of semi-arid woodlands dominated by a Pistachio-Amygdalus community. At three sites in the southern Irano-Turanian zone, we contrasted moisture, pH, electrical conductivity (EC), organic carbon (SOC), total nitrogen (TN) and nutrient concentrations of bare soil with below-crown soil. In addition, we examined soil microbial respiration (Rmic), substrate-induced respiration (SIR), microbial biomass carbon (Cmic) and nitrification potential to evaluate the influence of pistachio trees on soil microbial activity. Soil pH and C/N ratio were similar between bare and below-crown soils but significantly greater soil moisture (+41 %), EC (+13 %), SOC (+82 %) and TN (+75 %) were observed below pistachio crowns. Most soil nutrients were more abundant beneath tree crowns, especially zinc and manganese. Soil microbial activity was greater below crowns compared to bare soil as evidenced by significantly elevated Rmic (+11 %), SIR (+86 %), Cmic (+61 %) and nitrification potential (+49 %). SOC-normalization of microbial variables revealed that a SOC-driven increase in Cmic was largely responsible for the enhanced soil microbial activity below crowns. Microbial communities in bare soil showed a higher metabolic quotient (Rmic/Cmic) than in below-crown soil, suggesting low microbial efficiency and higher metabolic costs. Our findings indicate that the soils below wild pistachio crowns represent fertility islands, where soil quality and microbial activity are supported by an increased supply of organic matter and more favourable soil moisture conditions. The few woodlands that have remained relatively intact in this area urgently require conservation action while restoration planting of wild pistachio trees in degraded areas may help restore soil quality.