Strong Local Effects Research Articles

Evaluation of seismic hazard for the assessment of historical elements at risk: description of input and selection of intensity measures

The assessment of historical elements at risk from earthquake loading presents a number of differences from the seismic evaluation of modern structures, for design or retrofitting purposes, which is covered by existing building codes, and for the development of fragility curves, procedures for which have been extensively developed in the past decade. This article briefly discusses: the hazard framework for historical assets, including a consideration of the appropriate return period to be used for such elements at risk; the intensity measures that could be used to describe earthquake shaking for the analysis of historical assets; and available approaches for their assessment. We then discuss various unique aspects of historical assets that mean the characterisation of earthquake loading must be different from that for modern structures. For example, historical buildings are often composed of heterogeneous materials (e.g., old masonry) and they are sometimes located where strong local site effects occur due to: steep topography (e.g., hilltops), basin effects or foundations built on the remains of previous structures. Standard seismic hazard assessment undertaken for modern structures and the majority of sites is generally not appropriate. Within the PERPETUATE project performance-based assessments, using nonlinear static and dynamic analyses for the evaluation of structural response of historical assets, were undertaken. The steps outlined in this article are important for input to these assessments.

Plasmonic ELISA for the ultrasensitive detection of Treponema pallidum

In this report, we have developed a plasmonic ELISA strategy for the detection of syphilis. Plasmonic ELISA is an enzyme-linked immunoassay combined with enzyme-mediated surface plasmon resonance (SPR) of gold nanoparticles (AuNPs). Immune response of the Treponema pallidum (T. pallidum) antibodies triggers the acetylcholinesterase-catalyzed hydrolysis of acetylthiocholine to produce abundant thiocholine. The positive charged thiol, in turn, alters the surface charge distribution the AuNPs and leads to the agglomeration of the AuNPs. The induced strong localized SPR effect of the agglomerate AuNPs can, thus, allow the quantitative assay of T. pallidum antibodies due to the remarkable color and absorption spectral response changes of the reaction system. The plasmonic ELISA exhibited a quasilinear response to the logarithmic T. pallidum antibody concentrations in the range of 1pg/mL–10ng/mL with a detection limit of 0.98pg/mL. Such a low detection limit was 1000-fold improvements in sensitivity over a conventional ELISA. The results of plasmonic ELISA in syphilis assays of serum specimens from 60 patients agreed with those obtained using a conventional ELISA method. The plasmonic ELISA has characteristics (analyte specific, cost-effective, ease of automatic, low limit of detection) that provide potential for diagnosis and therapeutic monitoring of syphilis.

Strong localized surface plasmon resonance effects of Ag/TiO2core–shell nanowire arrays in UV and visible light for photocatalytic activity

Periodic arrays of silver/titanium dioxide (Ag/TiO2) open core-shell nanowires have been investigated as enhanced plasmonic photocatalytic structures. Sequential top-down nanofabrication processes based on nanoimprinting, oblique angle evaporation, and selective electrodeposition were employed for the fabrication of various TiO2-shelled Ag nanowire arrays. Numerical simulation proves that the periodic array of Ag/TiO2 core-shell nanowire structures enables strong localized surface plasmon resonance (LSPR), which improves the electron generation and photocatalytic activities of the TiO2 shell. Enhanced photocatalytic performance was confirmed by the decomposition of methylene blue solution. Furthermore, the film composed of a Ag/TiO2 core-shell nanowire array shows photocatalytic reproducibility in the UV and visible light regions and mechanical robustness due to the periodic grating-like metal nanostructures. Our method allows reliable, controllable, and facile fabrication of large-scale plasmonic photocatalytic nanostructured films on various substrates such as glass, polymer, etc.

Exchange interactions in paramagnetic amorphous and disordered crystallineCrN-based systems

We present a first principles supercell methodology for the calculation of exchange interactions of magnetic materials with arbitrary degrees of structural and chemical disorder in their high temperature paramagnetic state. It is based on a projection of the total magnetic energy of the system onto local pair clusters, allowing the interactions to vary independently as a response to their local environments. We demonstrate our method by deriving the distance dependent exchange interactions in vibrating crystalline CrN, a Ti${}_{0.5}$Cr${}_{0.5}$N solid solution as well as in amorphous CrN. Our method reveals strong local environment effects in all three systems. In the amorphous case we use the full set of exchange interactions in a search for the noncollinear magnetic ground state.

Delayed emission from InGaAs/GaAs quantum dots grown by migration-enhanced epitaxy due to carrier localization in a wetting layer

Wetting layer (WL) photoluminescence (PL) at 10 K dominated the PL spectra of low-density quantum dots (QDs) grown by migration-enhanced epitaxy (MEE), even at very low excitation powers. Long PL rise time at the ground state (GS) of QDs was observed, when carriers are generated in the WL, indicating suppressed carrier capture from the WL into the QDs. Fluctuations in the WL thickness due to WL thinning in the MEE-grown QDs produced strong localization effects. Temperature dependence of the WL PL intensity and the GS PL rise time agreed well with this interpretation.

A transported probability density function/photon Monte Carlo method for high-temperature oxy–natural gas combustion with spectral gas and wall radiation

A computational fluid dynamics model for high-temperature oxy–natural gas combustion is developed and exercised. The model features detailed gas-phase chemistry and radiation treatments (a photon Monte Carlo method with line-by-line spectral resolution for gas and wall radiation – PMC/LBL) and a transported probability density function (PDF) method to account for turbulent fluctuations in composition and temperature. The model is first validated for a 0.8 MW oxy–natural gas furnace, and the level of agreement between model and experiment is found to be at least as good as any that has been published earlier. Next, simulations are performed with systematic model variations to provide insight into the roles of individual physical processes and their interplay in high-temperature oxy–fuel combustion. This includes variations in the chemical mechanism and the radiation model, and comparisons of results obtained with versus without the PDF method to isolate and quantify the effects of turbulence–chemistry interactions and turbulence–radiation interactions. In this combustion environment, it is found to be important to account for the interconversion of CO and CO2, and radiation plays a dominant role. The PMC/LBL model allows the effects of molecular gas radiation and wall radiation to be clearly separated and quantified. Radiation and chemistry are tightly coupled through the temperature, and correct temperature prediction is required for correct prediction of the CO/CO2 ratio. Turbulence–chemistry interactions influence the computed flame structure and mean CO levels. Strong local effects of turbulence–radiation interactions are found in the flame, but the net influence of TRI on computed mean temperature and species profiles is small. The ultimate goal of this research is to simulate high-temperature oxy–coal combustion, where accurate treatments of chemistry, radiation and turbulence–chemistry–particle–radiation interactions will be even more important.

Local bystander effect induces dormancy in human medullary thyroid carcinoma model in vivo

The extent of local bystander effect induced by fusion yeast cytosine deaminase::uracil phosphoribosyltransferase (yCD) in combination with 5-fluorocytosine (5FC) was evaluated in xenogeneic model of human medullary thyroid carcinoma (MTC). This approach to gene-directed enzyme/prodrug therapy (GDEPT) induces strong bystander cytotoxicity. Effector yCD-TT mixed with target EGFP-TT cells in a ratio 2:9 could achieve significant tumor regression and 14-fold decrease in serum marker calcitonin upon 5FC administration. Histopathological analysis unraveled that antitumor effect resulted in tumor dormancy and proliferation arrest of remaining tumor cell clusters in vivo. yCD/5FC combination represents another GDEPT approach to achieve tumor growth control in MTC.

A cross-platform analysis of 14,177 expression quantitative trait loci derived from lymphoblastoid cell lines

Gene expression levels can be an important link DNA between variation and phenotypic manifestations. Our previous map of global gene expression, based on ∼400K single nucleotide polymorphisms (SNPs) and 50K transcripts in 400 sib pairs from the MRCA family panel, has been widely used to interpret the results of genome-wide association studies (GWASs). Here, we more than double the size of our initial data set with expression data on 550 additional individuals from the MRCE family panel using the Illumina whole-genome expression array. We have used new statistical methods for dimension reduction to account for nongenetic effects in estimates of expression levels, and we have also included SNPs imputed from the 1000 Genomes Project. Our methods reduced false-discovery rates and increased the number of expression quantitative trait loci (eQTLs) mapped either locally or at a distance (i.e., in cis or trans) from 1534 in the MRCA data set to 4452 (with <5% FDR). Imputation of 1000 Genomes SNPs further increased the number of eQTLs to 7302. Using the same methods and imputed SNPs in the newly acquired MRCE data set, we identified eQTLs for 9000 genes. The combined results identify strong local and distant effects for transcripts from 14,177 genes. Our eQTL database based on these results is freely available to help define the function of disease-associated variants.

Mechanical leaf damage causes localized, but not systemic, changes in leaf movement behavior of the Sensitive Plant, Mimosa pudica (Fabaceae) L.

A small number of species, including Mimosa pudica, use rapid leaf movement as a presumptive defensive strategy. How movement-based defenses change in response to mechanical damage and whether changes are localized or systemic is unknown. This is in contrast to a substantial literature describing how mechanical leaf damage can cause morphological and chemical responses within a diversity of plant species. Depending on the species and the stimuli, these chemical and morphological responses can be localized to the tissues damaged or systemic throughout the plant body. Here we report the results of a small experiment designed to test the following: (i) whether mechanical leaf damage influences subsequent leaf closure behavior, and (ii) whether changes were systemic or localized. To do this, we scored leaves using a behavioral assay (time-to-reopen leaves following a subsequent touch stimuli) for several days before and following mechanical damage. Leaves above and below the damaged leaf were observed, on damaged and undamaged plants, allowing us to assess whether any change was systemic. We found leaf damage caused strong localized effects, greatly increasing the time-to-reopen of the damaged, but not adjacent, leaves. Neither the physiological cause nor fitness consequences of this behavioral shift are known. Interestingly, this altered behavior resulted in damaged leaves remaining “hidden” longer than undamaged leaves. If leaf closure reduces risk of herbivory, there could be adaptive value, analogous to inducible chemical and morphological defenses.

Enhanced third harmonic generation by localized surface plasmon excitation

We experimentally achieved optical third harmonic generation (THG) from two-dimensional periodically arrayed gold-island films. The gold-island films were fabricated using micro-spherical lithography. By using a reflection-type optical system, these arrays can produce significant THG with the help of a spectrum-resolved femto-second laser. At the localized surface plasmon (LSP) excitation wavelength of the fundamental wave, THG is greatly enhanced due to the strong light localization effect. The radiation direction of THG satisfies the momentum matching condition.

Parallel-transmission-enabled magnetization-prepared rapid gradient-echo T1-weighted imaging of the human brain at 7T

One of the promises of Ultra High Field (UHF) MRI scanners is to bring finer spatial resolution in the human brain images due to an increased signal to noise ratio. However, at such field strengths, the spatial non-uniformity of the Radio Frequency (RF) transmit profiles challenges the applicability of most MRI sequences, where the signal and contrast levels strongly depend on the flip angle (FA) homogeneity. In particular, the MP-RAGE sequence, one of the most commonly employed 3D sequences to obtain T1-weighted anatomical images of the brain, is highly sensitive to these spatial variations. These cause deterioration in image quality and complicate subsequent image post-processing such as automated tissue segmentation at UHF. In this work, we evaluate the potential of parallel-transmission (pTx) to obtain high-quality MP-RAGE images of the human brain at 7 T. To this end, non-selective transmit-SENSE pulses were individually tailored for each of 8 subjects under study, and applied to an 8-channel transmit-array. Such RF pulses were designed both for the low-FA excitation train and the 180° inversion preparation involved in the sequence, both utilizing the recently introduced k(T)-point trajectory. The resulting images were compared with those obtained from the conventional method and from subject-specific RF-shimmed excitations. In addition, four of the volunteers were scanned at 3 T for benchmarking purposes (clinical setup without pTx). Subsequently, automated tissue classification was performed to provide a more quantitative measure of the final image quality. Results indicated that pTx could already significantly improve image quality at 7 T by adopting a suitable RF-Shim. Exploiting the full potential of the pTx-setup, the proposed k(T)-point method provided excellent inversion fidelity, comparable to what is commonly only achievable at 3 T with energy intensive adiabatic pulses. Furthermore, the cumulative energy deposition was simultaneously reduced by over 40% compared to the conventional adiabatic inversions. Regarding the low-FA k(T)-point based excitations, the FA uniformity achieved at 7 T surpassed what is typically obtained at 3 T. Subsequently, automated white and gray matter segmentation not only confirmed the expected improvements in image quality, but also suggests that care should be taken to properly account for the strong local susceptibility effects near cranial cavities. Overall, these findings indicate that the k(T)-point-based pTx solution is an excellent candidate for UHF 3D imaging, where patient safety is a major concern due to the increase of specific absorption rates.

Surface plasmon polariton-controlled tunable quantum-dot emission

The unique properties of surface plasmon polaritons, such as strong field confinement and local field enhancement effects, make them ideal candidates to enhance and shape the emission of luminescent nanoparticles. Of these nanoparticles, quantum dots are highly versatile, suitable for vastly different applications due to their size and material tunability. In many cases however, the emission wavelength of the quantum dots is fixed after manufacturing, allowing no control over the in situ emission properties. Here, we show fully optical, in situ tunability of the emission wavelength of quantum dots, with shifts of over 30 nm, employing surface plasmon polaritons to control the emission wavelength.

Stimulated Raman backward scattering of a laser beam in a magnetized plasma

Stimulated Raman scattering of a laser beam is investigated in the plasma with strong self generated magnetic field. The magnetized plasma supports various localized radial and azimuthal modes of lower hybrid frequencies. The density fluctuations due to lower hybrid modes couple with the oscillating velocity due to the pump, and drive the scattered wave. Equations describing the Raman process are derived and effects of various modes are studied on the growth rate analytically. Self generated magnetic field has a strong localization effect on the Raman process and growth rate is maximum for radial eigen mode number q=0 and azimuthal eigen mode number l=3. The frequency shift has signatures of self generated magnetic field and could serve as a diagnostic.

Ex-Vessel Neutron Dosimetry Analysis for Westinghouse 4-Loop XL Pressurized Water Reactor Plant Using 3D Parallel Discrete Ordinates Code RAPTOR-M3G

Abstract Traditional two-dimensional (2D)/one-dimensional (1D) SYNTHESIS methodology has been widely used to calculate fast neutron (&amp;gt;1.0 MeV) fluence exposure to reactor pressure vessel in the beltline region. However, it is expected that this methodology cannot provide accurate fast neutron fluence calculation at elevations far above or below the active core region. A three-dimensional (3D) parallel discrete ordinates calculation for ex-vessel neutron dosimetry on a Westinghouse 4-Loop XL Pressurized Water Reactor has been done. It shows good agreement between the calculated results and measured results. Furthermore, the results show very different fast neutron flux values at some of the former plate locations and elevations above and below an active core than those calculated by a 2D/1D SYNTHESIS method. This indicates that for certain irregular reactor internal structures, where the fast neutron flux has a very strong local effect, it is required to use a 3D transport method to calculate accurate fast neutron exposure.

ZnO/Si arrays decorated by Au nanoparticles for surface-enhanced Raman scattering study

Large scale and highly ordered flowerlike ZnO/Si nanostructures are successfully prepared by combining two common techniques, viz. hydrothermally etch fabrication of nanoporous Si pillar array (NSPA) and self-catalytic chemical vapor transport growth of ZnO nanowires. Au nanoparticles are decorated onto the ZnO/Si nanoflowers by the hydrothermal method. The formed Au/ZnO/NSPA array is evaluated as a surface-enhanced Raman scattering SERS-active substrate, which exhibits very high sensitivity and good stability and reproducibility. The excellent SERS enhancement is mainly attributed to the strong local electromagnetic effect which is associated with the unique flowerlike nanostructures of Au/ZnO/NSPA and the formed metal-induced gap states at the Au/ZnO interfaces. The results indicated that Au/ZnO/NSPA might be employed as a promising SERS substrate for the fast detection of low-concentration biomolecules.

Identifying effects of local and nonlocal factors of soil water storage using cyclical correlation analysis

AbstractThere are various factors governing the spatial and temporal variability of soil water storage including soil properties, topography and vegetation. Some factors act locally, whereas others act nonlocally, which means that a factor measured at one location has effect on soil water storage at another location. The objective of this study was to examine the effects of local and nonlocal controls of soil water storage in a hummocky landscape using cyclical correlation analysis. Soil water storage, soil properties and terrain indices were measured along a 128‐point transect of 576 m long from the semiarid, hummocky, prairie pothole region of North America. There are large coefficients of determination (r2) between soil water storage and sand content (r2 = 0.32–0.53), organic carbon content (r2 = 0.22–0.56), depth to carbonate layer (r2 = 0.13–0.63), wetness index (r2 = 0.25–0.45) and other variables at the measurement scale at different times, indicating strong local effects from these variables. The correlation coefficients were also calculated by physically shifting the spatial series of soil water storage with respect to that of controlling factors. The shifting improves the correlation between the spatial series, and the length of shifting indicated the difference in the response of soil water to its controlling factors. For example, the value of r2 increased more than eightfold (r2 = 0.47–0.64) after shifting the spatial series of soil water storage by 54 m, almost equal to the average length of existing slope, compared with the very weak correlation (r2 = 0.02–0.08) at the measurement scale. This indicated the nonlocal effect from the relative elevation. The identification of nonlocal effects from factors improves the prediction of soil water storage. Copyright © 2011 John Wiley &amp; Sons, Ltd.

Variation in breeding parameters of Eleonora's falcon (Falco eleonorae) and factors affecting its reproductive performance

AbstractWe gathered data for a four‐year period (2004–2007) on the nesting ecology and reproductive performance of Eleonora's falcon in the Aegean Sea. We investigated in an indirect way the relation between clutch size and pre‐laying food availability, the significance of site and pair quality on productivity, and the effects of habitat and intraspecific competition on breeding success. Overall, the species selected nest sites sheltered from sun exposure but not from the prevailing wind. Hatching, fledging, and breeding success rates were estimated at 64, 72%, and 60%, respectively. Fledglings per breeding pair ranged from 1.19 to 1.75, and fledglings per successful pair from 1.84 to 2.0, between the years. Productivity depended on parental care rather than nest‐site quality. Breeding parameters varied significantly between the years, exhibiting a strong spatial yet local effect. Low success rates were recorded in specific colonies, which were attributed to adverse weather conditions and habitat degradation. Insect food availability prior to egg‐laying, estimated via plant biomass, was positively correlated to clutch size. Meanwhile, low wind strengths in August, large distances from the mainland, and population size in the vicinity of the colonies had negative effects on breeding success. Considering data at the Mediterranean scale, a longitudinal trend is observed across the breeding range of this species, with breeding parameters slightly decreasing from west to east.

Predicting habitat preferences for Anthometrina adriani (Echinodermata) on the East Antarctic continental shelf

The comatulid crinoid Anthometrina adriani is well represented among the suspension-feeding megaepibenthos from the continental shelf of the Dumont D'Urville Sea, Antarctica. Nearly 500 specimens were sampled during the Collaborative East Antarctic Marine Census expedition onboard the RV 'Aurora Australis' (December 2007 to January 2008), from 50 of the 87 stations over a 400 km² area. Abiotic environmental factors were measured and an ocean circulation model was used to generate near-bottom parameters. The ecological niche of A. adri- ani was described by using ecological-niche factor analysis and Mahalanobis distances factor analysis. An environmental suitability map (ESM) was developed to map the optimal habitat. A. adriani prefers moderately deep and relatively cold waters with moderate current velocity, and a substrate with low gravel content and biogenic carbonate. The ESM shows 4 optimal regions: the eastern side of the George V Basin, the eastern side of the Adelie Basin, the southern part of the Adelie Bank, and the coastal area between the Astrolabe and Mertz glaciers. The ecological niche for A. adriani appears very narrow, but the species is widely distributed across the Antarctic shelf. It suggests that local changes in limiting factors have a strong local effect on the distribution of this species and that a total eradication of this species from the shelf would need an Antarctic-wide and synchronic change in these essential parameters. Modeling modifications in environmental conditions under different climate change scenarios could help predict the effect of such changes on the distribution of this selective species.

First-principles quasiparticle damping rates in bulk lead

First principles calculations of the damping rates (inverse inelastic lifetimes) of low energy quasiparticles in bulk Pb are presented. Damping rates are obtained both for excited electrons and holes with energies up to 8 eV on a set of k vectors throughout the Brillouin zone (BZ). Strong localization effects in the calculated lifetimes are found. Averaged over the BZ inelastic lifetimes versus quasiparticle energy are reported as well. In addition, the effect of the spin-orbit induced splitting in the band structure on the calculated lifetimes in Pb is investigated.

Freestanding Ge/GeO2 Core‐Shell Nanocrystals with Varying Sizes and Shell Thicknesses: Microstructure and Photoluminescence Studies

Freestanding Ge/GeO2 core‐shell nanocrystals (NCs) with varying sizes and shell thicknesses were synthesized by a ball milling method. The core‐shell NCs consist of single crystalline Ge core and crystalline GeO2 shell. With increasing milling time, sizes of the NCs decrease while GeO2 shell layer thicknesses increase. After 30 hours of milling, size of the core‐shell NCs goes down to 11 nm. Analysis of high‐resolution transmission electron microscope images revealed the presence of strain in the NCs and lattice distortion/dislocations in the Ge core near the interface of Ge core and GeO2 shell. This induced a strong phonon localization effect as evident from Raman studies and leads to enhanced radiative recombination, resulting in intense photoluminescence. Strong photoluminescence peaks in the visible and UV region were observed from all the samples and are attributed to Ge/GeO2 interface defect states. Optical Raman scattering studies confirm the formation of strained Ge/GeO2 core‐shell NCs with varying thicknesses.