Elevated nitrate concentrations in streams and groundwater are frequently observed following forest harvest. In addition to depleting nutrients available for forest regeneration, elevated nitrate export following harvest can have deleterious effects on downstream aquatic ecosystems. As part of a forest harvest experiment conducted at the Turkey Lakes Watershed, Ontario, Canada, stable isotope techniques were employed to investigate nitrate attenuation in a natural wetland receiving high concentrations of nitrate as a result of clear-cutting in the catchment. Isotopic analysis of nitrate (δ 18O, δ 15N) and vegetation (δ 15N) demonstrated that both denitrification and plant uptake of nitrate resulted in significantly lower nitrate concentrations in wetland outflow compared to incoming stream water. Although the 0.2-ha forested swamp (4% of catchment by area) was too small to be featured on standard topographic maps, the wetland remove 65–100% of surface water nitrate inputs, thereby protecting downstream aquatic habitats from the full effect of N release from forest harvest. The δ 15N enrichment factor associated with nitrate attenuation in wetland surface water was lower than typically observed during denitrification in groundwaters, suggesting that nitrate removal is complete in some areas of the wetland. Plant assimilation of nitrate was also partially responsible for the low observed enrichment factor. Wetland plants recorded the high δ 15N associated with denitrification activity in portions of the wetland. Apportionment of nitrate sources using δ 18O–NO 3 − at the outlet weir was unaffected by the wetland nitrate attenuation under pre- and post-harvest conditions due to the mid-catchment position of the wetland. Future forest management practices designed to recognize and preserve small wetlands could reduce the potentially detrimental effects of forest harvest on aquatic systems.