Stratified Water Bodies Research Articles

Cyanobacteria and Cyanotoxins in a Changing Environment: Concepts, Controversies, Challenges

Concern is widely being published that the occurrence of toxic cyanobacteria is increasing in consequence of climate change and eutrophication, substantially threatening human health. Here, we review evidence and pertinent publications to explore in which types of waterbodies climate change is likely to exacerbate cyanobacterial blooms; whether controlling blooms and toxin concentrations requires a balanced approach of reducing not only the concentrations of phosphorus (P) but also those of nitrogen (N); how trophic and climatic changes affect health risks caused by toxic cyanobacteria. We propose the following for further discussion: (i) Climate change is likely to promote blooms in some waterbodies—not in those with low concentrations of P or N stringently limiting biomass, and more so in shallow than in stratified waterbodies. Particularly in the latter, it can work both ways—rendering conditions for cyanobacterial proliferation more favourable or less favourable. (ii) While N emissions to the environment need to be reduced for a number of reasons, controlling blooms can definitely be successful by reducing only P, provided concentrations of P can be brought down to levels sufficiently low to stringently limit biomass. Not the N:P ratio, but the absolute concentration of the limiting nutrient determines the maximum possible biomass of phytoplankton and thus of cyanobacteria. The absolute concentrations of N or P show which of the two nutrients is currently limiting biomass. N can be the nutrient of choice to reduce if achieving sufficiently low concentrations has chances of success. (iii) Where trophic and climate change cause longer, stronger and more frequent blooms, they increase risks of exposure, and health risks depend on the amount by which concentrations exceed those of current WHO cyanotoxin guideline values for the respective exposure situation. Where trophic change reduces phytoplankton biomass in the epilimnion, thus increasing transparency, cyanobacterial species composition may shift to those that reside on benthic surfaces or in the metalimnion, changing risks of exposure. We conclude that studying how environmental changes affect the genotype composition of cyanobacterial populations is a relatively new and exciting research field, holding promises for understanding the biological function of the wide range of metabolites found in cyanobacteria, of which only a small fraction is toxic to humans. Overall, management needs case-by-case assessments focusing on the impacts of environmental change on the respective waterbody, rather than generalisations.

Microplastics accumulate to thin layers in the stratified Baltic Sea.

In the Baltic Sea, water is stratified due to differences in density and salinity. The stratification prevents water from mixing, which could affect sinking rates of microplastics in the sea. We studied the accumulation of microplastics to halocline and thermocline. We sampled water with a 100μm plankton net from vertical transects between halo- and thermocline, and a 30L water sampler from the end of halocline and the beginning of thermocline. Thereafter, microplastics in the whole sample volumes were analyzed with imaging Fourier transform infrared spectroscopy (FTIR). The plankton net results showed that water column between halo- and thermoclines contained on average 0.92±0.61MPm-3 (237±277 ng/m-3; mean±SD), whereas the 30L samples from the end of halocline and the beginning of thermocline contained 0.44±0.52MPL-1 (106±209ngL-1). Hence, microplastics are likely to accumulate to thin layers in the halocline and thermocline. The vast majority of the found microplastics were polyethylene, polypropylene and polyethylene terephthalate, which are common plastic types. We did not observe any trend between the density of microplastics and the sampling depth, probably because biofilm formation affected the sinking rates of the particles. Our results indicate the need to sample deeper water layers in addition to surface waters at least in the stratified water bodies to obtain a comprehensive overview of the abundance of microplastics in the aquatic environment.

Horizontal transport under wind-induced resonance in stratified waterbodies

Wind is the primary driver of horizontal flows in stratified lakes. Its periodic nature may cause a resonance regime when its frequency matches that of an internal mode of motion of the waterbody forced by it. Here, we show via numerical experiments that the wind-induced, resonant basin-scale internal waves most often observed may lead to different net horizontal transports depending on their vertical modal structure. We suggest that the wind-induced resonance phenomenon in stratified lakes might be a canonical hydrodynamics feature, especially in water basins exposed to diurnal breezes.

Organic geochemical characteristics and organic matter enrichment of mudstones in an Eocene saline lake, Qianjiang Depression, Hubei Province, China

Abstract The Qianjiang Depression is a typical Eocene hypersaline lake basin developing good source rocks in the Qianjiang Formation, which have recently been identified as a potential target for saline lacustrine shale oil exploration. Previous studies have only focused on estimates of source rock potential and reservoir quality. However, studies on organic matter enrichment mechanisms in evaporative environments are limited. Based on organic geochemical and mineralogical data, as well as sedimentological analyses, we researched the factors controlling differences in organic matter enrichment in the basin. The results show that total organic carbon (TOC) contents are closely associated with lithofacies with distinct variations. Three main lithofacies associations (LAs) were identified: (1) glauberite-rich LA1 with medium TOC; (2) carbonate-rich LA2 with high TOC; and (3) anhydrite-rich LA3 with low TOC. The distribution of biomarkers from 14 samples indicate both higher land plants and aquatic organisms were involved in the organic matter accumulations. Combining experimental results on gammacerane/C30 hopane, extended tricyclic terpane ratio (ETR), Sr/Ba, V/Ni, and sedimentary characteristics, we analyzed the sedimentary environments of the three LAs. LA1 was deposited in a salinity stratified waterbody with strong evaporation, LA2 was deposited in a still, stratified deep waterbody, whereas LA3 was deposited in a disturbed, saline waterbody. Sedimentary environments not only controlled the formation of the lithofacies, but also influenced the organic matter sources and preservation. Relatively low salinity, strong anoxic condition without physical disturbance, appropriate nutritional terrigenous material inputs, and algal blooms produced the best organic matter enrichment in the saline lake system.

Characteristics of the Carbonate System in a Semiarid Estuary that Experiences Summertime Hypoxia

In oceanic environments, two sources of CO2 have been found to contribute to acidification of stratified water bodies, i.e., CO2 invasion due to anthropogenic atmospheric CO2 increase and respiration-produced CO2 from organic matter remineralization. Acidification caused by these CO2 sources has been observed frequently in numerous environments spanning from open continental shelves to enclosed estuaries. Here, we report observations on carbonate system dynamics in a relatively well-buffered lagoonal estuary, Corpus Christi Bay (CCB), in a semiarid subtropical region that is influenced by summertime hypoxia as well as strong evaporation and seagrass vegetation in the vicinity. While the relationship between dissolved oxygen (DO) and pH in the bottom waters of CCB was positive as in other coastal and estuarine environments prone to hypoxia, the slope was significantly less than in other systems. We attribute the high buffering capacity in CCB to the presence of abundant seagrass meadows adjacent to CCB and strong evaporation-produced density flow that delivers low CO2 waters to the bottom of CCB. Thus, despite the occurrence of hypoxia, neither bottom water carbonate saturation state with respect to aragonite (Ωarg) nor CO2 partial pressure (pCO2) reached critical levels, i.e., undersaturation (i.e., Ωarag 1000 µatm), respectively.

Metalimnetic oxygen minimum and the presence of Planktothrix rubescens in a low-nutrient drinking water reservoir

Dissolved oxygen is a key player in water quality. Stratified water bodies show distinct vertical patterns of oxygen concentration, which can originate from physical, chemical or biological processes. We observed a pronounced metalimnetic oxygen minimum in the low-nutrient Rappbode Reservoir, Germany. Contrary to the situation in the hypolimnion, measurements of lateral gradients excluded the sediment contact zone from the major sources of oxygen depletion for the metalimnetic oxygen minimum. Instead, the minimum was the result of locally enhanced oxygen consumption in the open water body. A follow-up monitoring included multiple chlorophyll a fluorescence sensors with high temporal and vertical resolution to detect and document the evolution of phytoplankton. While chlorophyll fluorescence sensors with multiple channels detected a mass development of the phycoerythrin-rich cyanobacterium Planktothrix rubescens in the metalimnion, this species was overlooked by the commonly used single-channel chlorophyll sensor. The survey indicated that the waning P. rubescens fluorescence was responsible for the oxygen minimum in the metalimnion. We hypothesize that pelagic processes, i.e., either oxygen use through decomposition of dead organic material originating from P. rubescens or P. rubescens extending its respiration beyond its photosynthetic activity, induced the metalimnetic oxygen minimum. The deeper understanding of the oxygen dynamics is mandatory for optimizing reservoir management.

Numerical Models of the Vertical Turbulent Exchange in Stably Stratified Water Body: I. Mathematical Models

Improved second-order mathematical models are developed for description of the processes of vertical turbulent exchange in stably stratified water body. The models are based on algebraic representations of Reynolds stresses and fluxes and the use of a differential transport equation of dispersion of fluctuations of the vertical velocity component. A numerical model of the vertical turbulent exchange under simultaneous stratification in temperature and salinity is developed. In the case of stable stratification defined by only a variation in salinity, role ofWeinstock modification of the relaxation time scale of a scalar field is evaluated.

Numerical Models of the Vertical Turbulent Exchange in Stably Stratified Water Body: II. Results of Numerical Experiments

On the basis of the developed models [1], numerical modeling of the problem on penetration of a turbulent layer of mixed liquid in linearly stratified medium under constant shear stress is performed. The calculation results are in satisfactory agreement with the known experimental data and show a significant effect of anisotropy of the flow on its main characteristics.

Antecedent aeolian dune topographic control on carbonate and evaporite facies: Middle Jurassic Todilto Member, Wanakah Formation, Ghost Ranch, New Mexico, USA

AbstractThe Middle Jurassic Todilto Member of the Wanakah Formation is a carbonate and gypsum unit inset into the underlying aeolian Entrada Sandstone in the San Juan Basin. Field and thin section study of the uppermost Entrada and Todilto at Ghost Ranch, New Mexico, identified Todilto facies and their relationship to remnant Entrada dune topography. Results support the previous interpretation that the Entrada dunes, housed in a basin below sea level, were rapidly flooded by marine waters. Mass wasting of the dunes gave rise to sediment‐gravity flows that largely buried remnant dune topography, leaving ca 12 m of relief that defined the antecedent condition for Todilto deposition. Previously interpreted as seasonal varves deposited in a stratified water body, the Todilto is reinterpreted as a microbial biolaminite. Most diagnostic are organic‐rich laminae with structures characteristic of filamentous microbes and containing trapped aeolian silt, and clotted‐texture laminae with a fabric associated with calcification of extracellular polymeric substances. The spatial arrangement of Todilto facies is controlled by the dune palaeotopography. A continuous basal laminated mudstone thickens over the dune crest, reflecting the optimum conditions for microbial mat development, and is interpreted to have been deposited when marine waters submerged the topography. Subsequent drying caused emergence of the crestal area, and formation of tepee structures and a dissolution breccia. Gypsiferous mudflats and periodic ponds occupied the dune flanks and interdune area, with gypsum concentrated within the interdune area. Entrada sands remained unstable during Todilto deposition with common injection structures into the Todilto, and a remnant slope caused the downslope movement and folding of Todilto strata on the upper lee face. Although some expansion of the gypsum occurred in the subsurface, facies architecture fostered development of a dissolution front adjacent to the interdune gypsum body with section collapse of gypsiferous limestone on the dune flanks.

Use Of Thermal Measurements With Different Spatial Resolutions To Monitor The Internal Structure Of Stratified Water Bodies

Use Of Thermal Measurements With Different Spatial Resolutions To Monitor The Internal Structure Of Stratified Water Bodies

Spectroscopic Study of Green Sulfur Bacteria in Stratified Water Bodies of the Kandalaksha Gulf of the White Sea

Optical characteristics of water in stratified lakes of the White Sea are of particular interest in connection with the observation of thin colored layers resulting from massive development of anoxygenic phototrophic bacteria around the chemocline. While optical properties of chlorophyll are widely used in remote sensing, spectral characteristics of bacteriochlorophylls (BChl) for natural microbial communities have been little studied. In this work, spectral study of green sulfur bacteria of four water bodies of the Kandalaksha Gulf of the White Sea was carried out. Absorption and fluorescence spectra were measured for water samples taken in March 2017 from different depths and compared with spectra of monocultures isolated from the same water bodies earlier. It has been shown that the BChl fluorescence in the living cells of green sulfur bacteria has two overlapping emission bands: in the region of 740–770 nm (BChl d and e) and at 815 nm (BChl a). The wavelength of the maximum of the first band depends on the ratio of the concentrations of green- and brown-colored forms of bacteria containing different types of BChl. A new method for separating the contributions of two types of bacteria is proposed, based on the deconvolution of the BChl fluorescence spectrum into three bands whose parameters are determined from the spectra of monocultures. The BChl content at various water depths has been estimated and the percentage ratio of different types of phototrophic bacteria has been determined.

An axisymmetric non-hydrostatic model for double-diffusive water systems

Abstract. The three-dimensional (3-D) modelling of water systems involving double-diffusive processes is challenging due to the large computation times required to solve the flow and transport of constituents. In 3-D systems that approach axisymmetry around a central location, computation times can be reduced by applying a 2-D axisymmetric model set-up. This article applies the Reynolds-averaged Navier–Stokes equations described in cylindrical coordinates and integrates them to guarantee mass and momentum conservation. The discretized equations are presented in a way that a Cartesian finite-volume model can be easily extended to the developed framework, which is demonstrated by the implementation into a non-hydrostatic free-surface flow model. This model employs temperature- and salinity-dependent densities, molecular diffusivities, and kinematic viscosity. One quantitative case study, based on an analytical solution derived for the radial expansion of a dense water layer, and two qualitative case studies demonstrate a good behaviour of the model for seepage inflows with contrasting salinities and temperatures. Four case studies with respect to double-diffusive processes in a stratified water body demonstrate that turbulent flows are not yet correctly modelled near the interfaces and that an advanced turbulence model is required.

Spectroscopic study of green sulfur bacteria in stratified water bodies of the Kandalaksha Gulf of the White Sea

Spectroscopic study of green sulfur bacteria in stratified water bodies of the Kandalaksha Gulf of the White Sea

Water Column Distribution of Mercury Species in Permanently Stratified Aqueous Environments

Biogeochemical structures of three permanently stratified waterbodies were studied: a sea water basin (the Black Sea), an estuary (Hunnbunn fjord), and a freshwater lake (Nordbytjernet), with focus on the distributions of methylmercury (MeHg) and total mercury (THg). THg concentrations were similar in the sea water basin (0.2–1.8 ng/L) and the freshwater lake (0.8–1.2 ng/L), but significantly higher in the estuary (0.6–9.4 ng/L). An increase in the MeHg concentration and MeHg/THg ratio were found in the redox zone in all three basins, indicating bacterial production of MeHg in the aqueous phase. In the lake and estuary, the maximum MeHg concentration and MeHg/THg ratio were found in samples located closest to the bottom sediments, likely due to the formation of MeHg in surface sediments and subsequent diffusion to the overlying waters.

Hells Bells – unique speleothems from the Yucatán Peninsula, Mexico, generated under highly specific subaquatic conditions

We here report on a type of meter-sized pendant speleothem growing under water in the submerged El Zapote sinkhole (cenote) west of Puerto Morelos on the Mexican Yucatán Peninsula. These conical, mantle-shaped downward expanding and diverging calcareous structures, here termed as Hells Bells, are yet unreported in the scientific literature. They are characterized by bell- or trumpet shaped longitudinal and circular, elliptical or horse-shoe-like horizontal cross-sections. Hells Bells grow downward, based on the downward divergence of the structures and the horizontally laminated internal texture of both blade-shaped spar calcite and microspar laminae. Age dating confirms that Hells Bells are young (<4500yr) and formed in a subaquatic environment. They grow under lightless conditions in a stratified water body, which is characterized by a fresh water body overlying a salt water body with a stagnant transition zone (halocline) of several meters. We hypothesize that the growth of these structures is mediated by specific physical and biogeochemical conditions above and in the halocline. Stagnant hydraulic conditions led to extensive diffusion profiles of several nutrients including calcium originating from the salt water body. Dissolved organic carbon from the fresh water is microbially oxidized in the upper part of the halocline, where a distinct redox zonation was identified from oxic to anoxic conditions. Degradation processes combined with slightly alkaline pH values as well as the diffusive transport of calcium into this zone may induce an increase in calcite oversaturation. Phylogenetic analysis of the community on the surface of the Hells Bells suggests the presence of microorganisms involved in the nitrogen-cycle, from which some potentially have the capability to increase the pH by autotrophic growth and denitrifying activity, thus supporting calcite precipitation. The growth of Hells Bells is strictly dependent on the elevation of the halocline. This offers a wide potential for the use of Hells Bells as archives of paleo-hydrological conditions during the Holocene, e.g. the variation of thickness of the fresh water lens on the Yucatán Peninsula.

Bacteria‐induced mixing in natural waters

AbstractSwimming organisms can enhance mixing in their natural environments by creating eddies in their wake and by dragging water along. However, these mixing mechanisms are inefficient for microorganisms, because swimming‐induced variations in velocity, temperature, and dissolved substances are evened out before they can be advected. In bioconvection, however, microorganisms induce water movement not by propulsion directly but by locally changing the fluid density, which drives convection. Observations of bioconvection have so far mainly been limited to laboratory settings. We report the first observation and quantification of bioconvection within a stratified natural water body. Using in situ measurements, laboratory experiments, and numerical simulations, we demonstrate that the bacterium Chromatium okenii is capable of mixing 0.3 to 1.2 m thick water layers at around 12 m water depth in the Alpine Lake Cadagno (Switzerland). As many species are capable of driving bioconvection, this phenomenon potentially plays a role in species distributions and influences large‐scale phenomena like algal blooms.

Microbial communities mediating algal detritus turnover under anaerobic conditions.

BackgroundAlgae encompass a wide array of photosynthetic organisms that are ubiquitously distributed in aquatic and terrestrial habitats. Algal species often bloom in aquatic ecosystems, providing a significant autochthonous carbon input to the deeper anoxic layers in stratified water bodies. In addition, various algal species have been touted as promising candidates for anaerobic biogas production from biomass. Surprisingly, in spite of its ecological and economic relevance, the microbial community involved in algal detritus turnover under anaerobic conditions remains largely unexplored.ResultsHere, we characterized the microbial communities mediating the degradation of Chlorella vulgaris (Chlorophyta), Chara sp. strain IWP1 (Charophyceae), and kelp Ascophyllum nodosum (phylum Phaeophyceae), using sediments from an anaerobic spring (Zodlteone spring, OK; ZDT), sludge from a secondary digester in a local wastewater treatment plant (Stillwater, OK; WWT), and deeper anoxic layers from a seasonally stratified lake (Grand Lake O’ the Cherokees, OK; GL) as inoculum sources. Within all enrichments, the majority of algal biomass was metabolized within 13–16 weeks, and the process was accompanied by an increase in cell numbers and a decrease in community diversity. Community surveys based on the V4 region of the 16S rRNA gene identified different lineages belonging to the phyla Bacteroidetes, Proteobacteria (alpha, delta, gamma, and epsilon classes), Spirochaetes, and Firmicutes that were selectively abundant under various substrate and inoculum conditions. Within all kelp enrichments, the microbial communities structures at the conclusion of the experiment were highly similar regardless of the enrichment source, and were dominated by the genus Clostridium, or family Veillonellaceae within the Firmicutes. In all other enrichments the final microbial community was dependent on the inoculum source, rather than the type of algae utilized as substrate. Lineages enriched included the uncultured groups VadinBC27 and WCHB1-69 within the Bacteroidetes, genus Spirochaeta and the uncultured group SHA-4 within Spirochaetes, Ruminococcaceae, Lachnospiraceae, Yongiibacter, Geosporobacter, and Acidaminobacter within the Firmicutes, and genera Kluyvera, Pantoea, Edwardsiella and Aeromonas, and Buttiauxella within the Gamma-Proteobaceteria order Enterobacteriales.ConclusionsOur results represent the first systematic survey of microbial communities mediating turnover of algal biomass under anaerobic conditions, and highlights the diversity of lineages putatively involved in the degradation process.

Genetic spatial structure of an anchialine cave annelid indicates connectivity within - but not between - islands of the Great Bahama Bank

Land-locked anchialine blue holes are karstic sinkholes and caves with tidally influenced, vertically stratified water bodies that harbor endemic fauna exhibiting variable troglomorphic features. These habitats represent island-like systems, which can serve to elucidate evolutionary and biogeographic processes at local scales. We investigated whether the ‘continuous spelean corridor’ hypothesis may elucidate the biogeographical distributions of the stygobitic annelid Pelagomacellicephala iliffei (Polynoidae) collected from the Great Bahama and Caicos Banks of the Bahamas Archipelago. Phylogenetic reconstructions were performed using Bayesian Inference on individual and combined datasets of three molecular markers (16S rDNA, COI, 18S rDNA) and species delimitation employed three widely accepted methods in DNA taxonomy, namely GMYC, bPTP, and ABGD. Mantel tests were used to test the effect of geography on genetic structure. Using these analyses, we recovered five independently evolving entities of the focal species across four islands of the Great Bahama Bank including Cat, Eleuthera, Exumas, and Long. Genetic data yielded strong correlations between islands and phylogenetic entities, signifying independent evolutionary histories within anchialine caves across the platform. The island of Eleuthera showed intra-island gene flow and dispersal capabilities between blue holes separated by 115km, providing evidence of a crevicular spelean corridor within the island. However, no evidence of inter-island dispersal is present in the analyzed system. Consistent with previous biogeographic studies of cave crustaceans, the major barriers shaping the cave biota of the Bahamas Archipelago appears to be the deep trenches and channels separating the Bahamian banks.

Isotopic evidence for the origin of dimethylsulfide and dimethylsulfoniopropionate-like compounds in a warm, monomictic freshwater lake

Environmental context The volatile sulfur compound, dimethylsulfide (DMS), plays a major role in the global sulfur cycle by transferring sulfur from aquatic environments to the atmosphere. Compared to marine environments, freshwater environments are under studied with respect to DMS cycling. The goal of this study was to assess the formation pathways of DMS in a freshwater lake using natural stable isotopes of sulfur. Our results provide unique sulfur isotopic evidence for the multiple DMS sources and dynamics that are linked to the various biogeochemical processes that occur in freshwater lake water columns and sediments. Abstract The volatile methylated sulfur compound, dimethylsulfide (DMS), plays a major role in the global sulfur cycle by transferring sulfur from aquatic environments to the atmosphere. The main precursor of DMS in saline environments is dimethylsulfoniopropionate (DMSP), a common osmolyte in algae. The goal of this study was to assess the formation pathways of DMS in the water column and sediments of a monomictic freshwater lake based on seasonal profiles of the concentrations and isotopic signatures of DMS and DMSP. Profiles of DMS in the epilimnion during March and June 2014 in Lake Kinneret showed sulfur isotope (δ34S) values of +15.8±2.0 per mille (‰), which were enriched by up to 4.8 ‰ compared with DMSP δ34S values in the epilimnion at that time. During the stratified period, the δ34S values of DMS in the hypolimnion decreased to –7.0 ‰, close to the δ34S values of coexisting H2S derived from dissimilatory sulfate reduction in the reduced bottom water and sediments. This suggests that H2S was methylated by unknown microbial processes to form DMS. In the hypolimnion during the stratified period DMSP was significantly 34S enriched relative to DMS reflecting its different S source, which was mostly from sulfate assimilation. In the sediments, δ34S values of DMS were depleted by 2–4 ‰ relative to porewater (HCl-extracted) DMSP and enriched relative to H2S. This observation suggests two main formation pathways for DMS in the sediment, one from the degradation of DMSP and one from methylation of H2S. The present study provides isotopic evidence for multiple sources of DMS in stratified water bodies and complex DMSP–DMS dynamics that are linked to the various biogeochemical processes within the sulfur cycle.

Numerical investigation of split flows by gravity currents into two-layered stratified water bodies

The behavior of a two-dimensional (2-D) gravity current impinging upon a density step in a two-layered stratified basin is analyzed using a high-resolution Reynolds-Averaged Navier-Stokes model. The gravity current splits at the density step, and the portion of the buoyancy flux becoming an interflow is largely controlled by the vertical distribution of velocity and density within the gravity current and the magnitude of the density step between the two ambient layers. This is in agreement with recent laboratory observations. The strongest changes in the ambient density profiles occur as a result of the impingement of supercritical currents with strong density contrasts, for which a large portion of the gravity current detaches from the bottom and becomes an interflow. We characterize the current partition process in the simulated experiments using the densimetric Froude number of the current (Fr) across the density step (upstream and downstream). When underflows are formed, more supercritical currents are observed downstream of the density step compared to upstream (Fru Frd), which indicates lower mixing between the current and ambient water after the impingement due to the significant stripping of interfacial material at the density step.