Integrins are receptors for extracellular matrix proteins and are involved in many critical cellular processes such as adhesion, migration, proliferation, differentiation and cell death. The β6-integrin subunit is merely detectable in normal epithelial tissues, whereas it is highly induced in epithelial cells during embryogenesis, wound repair as well as during tumorigenesis of many epithelial tumours such as colorectal cancer (CRC). In CRC, elevated β6-integrin levels are associated with reduced survival. Treatment of human CRC cell lines with immunoliposomes carrying siRNAs against β6-integrin reduced their migratory and invasive potential, induced apoptosis and reduced tumour growth of these cells. Since the exclusive expression of β6-integrin in epithelial tumours makes it an excellent drug target, we studied the efficacy of the αvβ6 inhibitor EMD527040 on tumour growth in mice with DSS/AOM induced colon tumours. Colitis-associated colon tumours were induced in C57BL/6 mice by repetitive administration of 1.5% DSS in drinking water and intraperitoneal AOM (10 mg/kg) injections. Mice without endoscopically detectable tumours after the DSS/AOM treatment were excluded from further study. The remaining mice were randomised to the different treatment groups according to their tumour load to obtain comparable groups at the beginning of the further treatment. Mice were then treated with vehicle, 20 mg/kg/day or 40 mg/kg/day EMD527040 for 24 days. Colonoscopy was performed to detect tumour development during the treatment course and to evaluate tumour load over time. Overall, treatment with EMD527040 was safe and we did not detect severe side effects of the tumour therapy. Mice that received vehicle or the low dose of EMD527040 showed either disease progression or no change in tumour load. No decrease in the number of colon tumours was observed in those two groups. However, in the group treated with the high dose of EMD527040 (40 mg/kg/day), only one mouse had disease progression and in two mice, which started treatment with a high tumour load, no progression or regression was observable. Of note however, in the remaining three mice which started with a moderate to low tumour load, a complete loss of tumours was observed upon high dose αvβ6 inhibitor treatment for 24 days. In early stage colitis-associated CRC (small tumours), treatment with αvβ6 inhibitor showed a strong anti-tumorigenic effect. Therefore, αvβ6 inhibition might be a potent strategy for treatment of CRC. However, the exact molecular mechanisms conferring this anti-tumorigenic effect, and whether other treatment schedules or doses could improve the effect in subjects with a high tumour load remains to be elucidated.