Steric Factors Research Articles

Investigating the effect of finite ionic size and solvent polarization on induced charge electro-osmosis around a perfectly polarizable cylinder

Many industrially relevant microfluidic applications use concentrated solutions of macro-molecular solutes dissolved in polar solvents like water, which are typically deployed at high voltages. In this study, we investigate the effect of finite ionic sizes and solvent polarization on induced charge electro-osmotic flow around a perfectly polarizable cylinder, at high electric field strengths and ionic concentrations. The flow is actuated by means of a direct current electric field, and the step response of various flow parameters are studied numerically. Finite ionic sizes, defined through a steric factor ν, are modeled using the modified Poisson–Nernst–Planck model. Additionally, a field-dependent permittivity, characterized by a solvent polarization number A, accounts for molecular re-orientation effects. Our findings reveal an ion-size modulated decrement in charge concentration in the electrical double layer and an augmentation in the electric field. Remarkably, the resulting flow velocities increase with ion size. Solvent polarization, on the other hand, results in a marked reduction in flow velocities. Steric effects, however, dominate over a large range of parameter space (applied voltage and bulk ionic concentration) as compared to solvent polarization. Finally, we demonstrate that unequal ionic sizes result in flow asymmetries at the steady-state, thereby generating net electro-phoretic motion of suspended particles.

Experimental and computational studies of steric factors in the isomerization of internal alkynes within the coordination environment of half-sandwich metal complexes.

The isomerization of internal alkynes Ar1C≡CAr2 within the coordination environment of low-valent half-sandwich [Ru(dppe)Cp]+ complexes via a 1,2-migration process affords vinylidene species [Ru{=C=C(Ar1)Ar2}(dppe)Cp]+. The rearrangement reactions of symmetrically and asymmetrically substituted substrates featuring different electron-donating and -withdrawing groups and of varying steric bulk were modelled using density functional theory (DFT), and the conclusions supported by experimental observations. Examination of the reaction pathway and associated activation barriers reveal a high solvent dependency for the generation of the key intermediate species [Ru(dppe)Cp]+ from [RuCl(dppe)Cp] by Na+ induced halide abstraction , with the lattice enthalpy of the NaCl by-product playing a critical role in the overall thermochemical balance of the reaction. The activation barriers associated with the reaction of [Ru(dppe)Cp]+ with Ar1C≡CAr2, and the relative energies of the alkyne complexes [Ru(h2-Ar1C≡CAr2)(dppe)Cp]+, are sensitive to the electron density of the alkyne and conformational changes associated with the 'bend-back' of the substrate. The latter differs by up to 66.1 kJ/mol, which in turn impacts the barrier height of the subsequent 1,2-migration step . The relative importance of these factors is evinced by the successful rearrangement of the very sterically congested 1(9-anthryl)-2(9-phenanthryl) acetylene into the fully characterized diaryl vinylidene complex, which was isolated in 89% yield.

Benzoylation of Tetrols: A Comparison of Regioselectivity Patterns for O- and S-Glycosides of d-Galactose.

Efficient protecting group strategies are important for glycan synthesis and represent a unique synthetic challenge in differentiating sugar ring hydroxyl groups. Direct methods to enable regioselective protecting group installation are thus desirable. Herein, we explore a one-step regioselective benzoylation to deliver 2,3,6-protected d-galactose building blocks from tetrols across a variety of α- and β-, O- and S-glycoside substrates. We focus on benzoyl chloride as the esterifying reagent and a reaction temperature of -40 °C to screen the regioselectivity outcome for twenty-two different glycosides, based on isolated yields. Using this methodology, we demonstrate the capability for α-linked aryl and alkyl glycosides (O- and S- d-galactosides, d-galactosamines, and l-fucose), delivering consistent isolated yields (>65%) for 2,3,6-benzoylated products. We extend to explore β-linked systems, where the observed regioselectivity is not paralleled. We posit that both steric and electronic factors from the anomeric substituent contribute to modulating the reactivity competition between 2-OH and 4-OH, enabling the formation of regioisomeric mixtures. However, a certain balance of these factors within the aglycon can deliver 2,3,6-regioselectivity, notably for β-O-Et and β-O-CH2CF3 glycosides. The methodology contributes toward understanding the peculiarities of regioselective carbohydrate-protecting group installation, exploring the importance of the anomeric substituent upon ring hydroxyl group reactivity.

Catalytic asymmetric inverse-electron-demand Diels–Alder reaction of 2-pyrones with aryl enol ethers

Chiral aryl cyclohex-3-en ether scaffold is widely present in bioactive natural products and drugs. The exploitation of efficient and enantioselective methods for the construction of aryl cyclohex-3-en ether scaffold is significant. Herein we disclose a chiral N,N’-dioxide/Lewis acid complex-catalyzed asymmetric inverse-electron-demand Diels–Alder (IEDDA) reaction using electron-deficient 3-carboalkoxyl-2-pyrones and less electron-enriched aryl enol ethers as reactants. A wide range of non- and 1,2-disubstituted acyclic aryl enol ethers are applicable to deliver diverse chiral bridged bicyclic lactones in high yields and stereoselectivities (up to 95% yield, >20:1 dr, 97:3 er). The bridged bicyclic lactone core can be easily converted into chiral aryl cyclohex-3-en ether scaffold. Notably, DFT calculations revealed a stepwise and endo mechanism to explain the high enantioselectivity controlled by the cooperative effect of the steric factors and the dispersion interactions between ligands and enol ethers.

Sulfonamides and sulfonate esters: Synthetic routes, proposed mechanisms, and crystallographic characterizations

The sulfonamide and sulfonate moieties are key structural features in many pharmaceuticals, agrochemicals, and materials and have proven useful as synthetic precursors. In this review, synthetic routes for sulfonamides and sulfonate esters were examined to gain insight into the mechanism behind the sulfonylation of amines and alcohols, which remains largely unknown and highly dependent on the reaction conditions used. Furthermore, the review delves into crystallographic characterizations of previously reported sulfonamide and sulfonate ester compounds, unraveling trends associated with crucial steric and electronic factors that influence their crystallization. This exploration not only enhances our understanding of the structural nuances of these compounds, but also paves the way for informed design strategies in synthetic and medicinal chemistry. In essence, this review endeavors to provide a holistic perspective on sulfonamides and sulfonate esters, bridging the realms of synthesis, mechanism elucidation, and structural characterization.

Multi-steps microfiltration of micelles from fermentation of Streptomyces tsukubaensis and its impact on proteins retention and tacrolimus yield

This study reports the application of microfiltration Streptomyces tsukubaensis micelles from fermentation broths, for tacrolimus recovery, investigating the use of a new multi-step microfiltration approach. Equal volumes of acetone were added to the fermented broth, and the resultant mixture was processed through multi-step microfiltration at 26 °C in a pressurized chamber, with operational pressures of 1 bar and 2 bar, using membranes with pore sizes of 0.22 μm and 3.0 μm. The permeate was recirculated, configuring ten steps of operation using the same membrane. The analysis of micelles microfiltration focused on the influence of multi-step processes on permeate flow and time steps, allowing exploration of pore blocking models. The cake filtration mechanism was identified as predominant for global filtration. The study achieved a 97 % micelles rejection rate in ten steps with a 3.0 μm pore membrane at 1 bar. Protein retention was also studied, showing a final retention rate of 60 %, with 40 % of proteins in the final permeate. This multi-step filtration process acts as microfiltration for micelles and ultrafiltration for proteins, improving tacrolimus purity. However, the tacrolimus yield was reduced by 9 %, attributed to increased tacrolimus adsorption on the gel/cake layer surface rather than steric factors.

Influence of blocking groups on photo-oxidation of tyrosine and derivatives

One-electron oxidation of tyrosine primarily results in the formation of di-tyrosine, which can induce crosslinks leading to protein damage. In this study, we investigated the 3-carboxybenzophenone-sensitized photo-oxidation of Tyr derivatives through time-resolved and steady-state photolysis under anaerobic conditions to analyze the effects of blocking groups.The mechanism for primary and secondary photoreactions in the sensitized photo-oxidation of Tyr derivatives in aqueous solution was presented based on time-resolved analysis and mass spectrometric characterization of photo-oxidation products. Identified di-Tyr products (in addition to those mentioned more often in the literature, such as 3,3′/3,O’) were in some samples presented together with Tyr-CBH adduct (resulting from radical recombination between the tyrosyl radical and CBH•). This publication discusses the possible coulombic effects of interacting ionic species (sensitizer and quencher) on quenching rate constants and the effect of amine groups and steric factors on the distribution of stable products. However, a crucial finding of this work is that the more blocked the Tyr is, the more di-Tyr isomers are formed, suggesting that Tyr residue in proteins may form several forms of di-Tyr cross-links.

Regioselective Ligand Substitution of Thiolate-Protected Gold Nanoclusters with Porphyrins

Hybridization of photofunctional organic molecules like porphyrins with inorganic nanomaterials provides interesting photophysical properties like photo-induced electron transfer, energy transfer, or photoemission from charge transfer states. For fine tuning of these photo-functionalities, precise control over organic-inorganic interfaces, including spatial distances and orientations of organic molecules against inorganic nanomaterial, should be crucial. However, control and evaluation of the interfaces are quite difficult, mainly due to heterogeneous and unclear environments on the surface of inorganic nanomaterials like metal nanoparticles and metal nanosheet, which basically have size and/or composition distributions.Among the inorganic nanomaterials, atomically-precise metal nanoclusters (MNCs) are one of the homogeneous materials with uniform composition and distinct surface structure at an atomic level. Thus, MNCs can be an appropriate model to evaluate the effects of organic-inorganic interfaces on photophysical properties of the hybridized materials. Nevertheless, even in one of the most common and simplest MNCs like thiolate-protected Au25 cluster ([Au25(SR)18]–, SR = thiolate), two kinds of inequivalent ligands (S1, S2 in Figure 1) are present on surface. Thus, control over the regioselectivity should be required to archive precise substitution of photo-functional molecules, which has yet to be reported. In this work, we have controlled regioselectivity in the modification of [Au25(SC2Ph)18]– (SC2Ph = phenylethanethiolate) with porphyrinthiol ligands (Por) through ligand-exchange reactions. An advantage of Por as a photofunctional ligand for Au25 cluster is more bulkiness than that of original ligands (SC2Ph), which aids the isolation of mono-porphyrin-coordinated Au25 cluster ([Au25(SC2Ph)17(Por)1]–, Au25-Por1 ). Moreover, synthetic flexibility of porphyrins enabled us to control the regioselectivity in Au25-Por1 systematically.We sythesized a series of Por with a thiol moiety at different positions to evaluate the steric effect on the regioselectivity in ligand-exchange reactions (Figure 1). Porphyrin thiol with different substituents at meso-phenyl groups were also synthesized to evaluate the electronic effect. Substitution of porphyrins onto Au25 clusters was conducted by ligand-exchange reactions of [Au25(SC2Ph)18]– with 1 equivalent of Por in tetrahydrofuran. After the careful purification of the reaction mixture through size-exclusion column chromatography, we have successfully isolated Au25-Por1 in ca. 20% yield. The characterizations of Au25-Por1 were performed by MALDI-TOF-MS and 1H NMR spectroscopy, which confirmed the high purities of a series of Au25-Por1 .The regioselectivity in Au25-Por1 was evaluated through 1H NMR measurements. When using para-substituted porphyrin (PorSH) as an incoming ligand, 1H NMR spectrum of Au25-SPor1 in acetone-d 6 indicated the presence two kinds of regioisomers with the ratio of 2.5:1. Interestingly, the regioselectivity increased up to 80% (4:1) in Au25 cluster with more steric meta-substituted porphyrin (Au25-S m Por1 ), whereas the ratio reached to almost 1:1 in the case of Au25 cluster with less steric phenyl-spacer introduced porphyrin (Au25-SPhPor1 ). Because S2 position in the Au25 clusters was less steric than S1 position, we concluded that more steric ligands like m PorSH tend to be introduced at S2 position favorably. On the other hand, we hardly observed the electronic effect of Por on the regioselectivity in Au25-Por1 , indicating the importance of steric factor of an incoming ligand for precise control over the exchanged position (Figure 1). This is the first report to control over ligand-exchange position of MNCs, which could be achieved through ligand design.Finally, we briefly evaluated the photophysical properties of Au25-Por1 in toluene solution. When the Soret band of coordinated-porphyrins was photoexcited, the fluorescence quenching was clearly observed in each Au25-Por1 . Judging from the energy diagram of Au25-Por1 , electron transfer from Au25 to singlet excited state of porphyrin ligand would occur to form charge separated state. It should be noted that the quenching efficiency depended on not only the distance between electron donor and acceptor, but also the position of the coordinated chromophore. These results suggest the importance of precise modification of organic-inorganic interfaces to tune photodynamics of chromophore-nanocluster systems.In conclusion, we have successfully controlled the regioselectivity in the ligand-exchange reactions of thiolate-protected gold nanoclusters with porphyrinthiol derivatives through the steric effect. The essential roles of the ligand-introduced position on altering photodynamics of porphyrin-coordinated MNCs were also clarified, which provides an interesting insight into fine-tuning of photofunctional materials.Figure 1.Reaction scheme of ligand-exchange reaction of [Au25(SC2Ph)18]– with Por. The R groups of SR ligands were omitted for clarity. Figure 1

Low-Molecular Weight Branched Polyethylenimine Reduces Cytokine Secretion from Human Immune System Monocytes Stimulated with Bacterial and Fungal PAMPs.

The innate immune system is an evolutionarily conserved pathogen recognition mechanism that serves as the first line of defense against tissue damage or pathogen invasion. Unlike the adaptive immunity that recruits T-cells and specific antibodies against antigens, innate immune cells express pathogen recognition receptors (PRRs) that can detect various pathogen-associated molecular patterns (PAMPs) released by invading pathogens. Microbial molecular patterns, such as lipopolysaccharide (LPS) from Gram-negative bacteria, trigger signaling cascades in the host that result in the production of pro-inflammatory cytokines. LPS stimulation produces a strong immune response and excessive LPS signaling leads to dysregulation of the immune response. However, dysregulated inflammatory response during wound healing often results in chronic non-healing wounds that are difficult to control. In this work, we present data demonstrating partial neutralization of anionic LPS molecules using cationic branched polyethylenimine (BPEI). The anionic sites on the LPS molecules from Escherichia coli (E. coli) and Klebsiella pneumoniae (K. pneumoniae) are the lipid A moiety and BPEI binding create steric factors that hinder the binding of PRR signaling co-factors. This reduces the production of pro-inflammatory TNF-α cytokines. However, the anionic sites of Pseudomonas aeruginosa (P. aeruginosa) LPS are in the O-antigen region and subsequent BPEI binding slightly reduces TNF-α cytokine production. Fortunately, BPEI can reduce TNF-α cytokine expression in response to stimulation by intact P. aeruginosa bacterial cells and fungal zymosan PAMPs. Thus low-molecular weight (600 Da) BPEI may be able to counter dysregulated inflammation in chronic wounds and promote successful repair following tissue injury.

Expanding the π-system of Fatty Acid-Anion Transporter Conjugates Modulates Their Mechanism of Proton Transport and Mitochondrial Uncoupling Activity.

Mitochondrial uncoupling by small molecule protonophores is a promising strategy for developing novel anticancer agents. Recently, aryl urea substituted fatty acids (aryl ureas) were identified as a new class of protonophoric anticancer agents. To mediate proton transport these molecules self-assemble into membrane-permeable anionic dimers in which intermolecular hydrogen bonds between the carboxylate and aryl-urea anion receptor delocalise the negative charge across the aromatic π-system. In this work, we extend the aromatic π-system by introducing a second phenyl substituent to the aryl urea scaffold and compare the proton transport mechanisms and mitochondrial uncoupling actions of these compounds to their monoaryl analogues. It was found that incorporation of meta-linked phenyl substituents into the aryl urea scaffold enhanced proton transport in vesicles and demonstrated superior capacity to depolarise mitochondria, inhibit ATP production and reduce the viability of MDA-MB-231 breast cancer cells. In contrast, diphenyl ureas linked through a 1,4-distribution across the phenyl ring displayed diminished proton transport activity, despite both diphenyl urea isomers possessing similar binding affinities for carboxylates. Mechanistic studies suggest that inclusion of a second aryl ring changes the proton transport mechanism, presumably due to steric factors that impose higher energy penalties for dimer formation.

Computational Insights into Palladium-Catalyzed Site-Selective Anilide and Benzamide-Type [3+2] Annulation via Double C-H Bond Activation.

The mechanism of palladium-catalyzed annulation reactions of benzamide- and anilide-type aromatic systems with maleimides is investigated using density functional theory. Double C-H bond activation is key to forming the desired annulation product. The first C-H bond activation for anilide- and amide-type ligands can occur at the ortho and benzylic C-H bonds, while the second C-H activation occurs at the meta carbon of the aromatic rings. For the anilide-type system, ortho and benzylic C-H bond activations occur via four- and five-membered palladacycles, respectively. In contrast, for the benzamide-type system, ortho and benzylic C-H bond activations occur via five- and six-membered palladacycles, respectively. The energy span model suggests that the initial C-H bond activation step at the benzylic position determines the turnover frequency for both anilide- and benzamide-type systems. Energy decomposition analysis and distortion-interaction/activation-strain analyses are employed to understand the electronic and steric factors controlling the turnover frequency-determining transition state.

Covalency-Driven Differences in the Hydrogenation Chemistry of Lanthanide- and Actinide-Based Frustrated Lewis Pairs.

The electronic organization of Frustrated Lewis Pairs (FLPs) allows them to activate strong bonds in mechanisms that are usually free of redox events at the Lewis acidic site. The unique 6d/5f manifold of uranium could serve as an interesting FLP acceptor site, but to date FLP-like catalysis with actinide ions is unknown. In this paper, the catalytic, FLP-like hydrogenation reactivity of trivalent uranium complexes is explored in the presence of base-stabilized silylenes. Comparison to isoelectronic, isostructural lanthanide and thorium complexes lends insight into the electronic factors governing dihydrogen activation. Mechanistic studies of the uranium- and lanthanide-catalyzed hydrogenations are presented, including discussion of likely intermediates. Computational modeling of the f-element complexes, combined with experimental comparison to p-block Lewis acids, elucidates the relevance of steric hindrance to productive reactivity with dihydrogen. Consideration of the complete experimental and theoretical evidence provides a clear picture of the electronic and steric factors governing dihydrogen activation by these FLPs.

Migration of Condensed Aromatic Hydrocarbons During Alkyne-Vinylidene Rearrangements.

Diarylacetylenes ArC≡CAr featuring condensed aromatic hydrocarbon fragments (Ar) such as naphthalene, anthracene, phenanthrene and pyrene were converted into vinylidene ligands by 1,2-migration reactions within the coordination sphere of half-sandwich complexes [MII(dppe)Cp]+ (MII = RuII, FeII). Comparison of the extent of conversion of the alkyne substrates to the vinylidene complexes [Ru{=C=CAr2}(dppe)Cp]+ with those obtained from acetylenes functionalized by smaller groups (H, CH3, Ph) show that the molecular volume (VM) of the migrating group and relief of steric congestion plays a role during the rearrangement process. Conversely, the H-atoms from the larger condensed ring aryl groups that are in close proximity to the migrating sites also have a significant influence on the efficacy and extent of the reaction by restricting access of the alkyne to the metal center, resulting in a less effective migration reaction. This combination of competing steric factors (acceleration due to relief of steric congestion and restricted access of the alkyne moiety to the reaction site) is exemplified by the facile migration of 1-pyryl entities and the low yields of vinylidene products formed from 1,2-bis(9-anthryl)acetylene.

Congestion of steric and electronic factors in α-diimine nickel precatalysts for high-temperature ethylene polymerization in accessing direct PE elastomer

In α-diimine-nickel catalysts mediated ethylene polymerization, the synergistic impact of steric and electronic factors plays an instrumental role in fine-tuning catalytic activity, polymer molecular weights, microstructure, as well as mechanical and elastic properties. In this study, a new series of nonsymmetrical bis(arylimino)-acenaphthene-nickel complexes was prepared and investigated for ethylene polymerization. These complexes feature both bulky N-2,6-dibenzhydryl-3,4,5-fluorophenyl imine and smaller N-2,6-di(R)-4-(R1)phenyl imine units [Ni2Me (R, = Me, R1 = H), Ni2Et (R, = Et, R1 = H) and Ni2iPr (R, = iPr, R1 = H), Ni3Me (R, R1 = Me), Ni2Et,Me (R, = Et, R1 = Me)]. The incorporation of both steric congestion and strong electronic withdrawal groups into the catalyst structure resulted in significantly improved catalytic performance: high thermal stability and exceptional activity were observed at both ambient temperature (21.24 × 106 at 30 °C) and industrially relevant temperatures (1.65 × 106 at 100 °C). Polymer molecular weights and branching degree were tunable by adjusting the ligand structure and reaction conditions. This correlation extended to mechanical and elastic properties, demonstrating high tensile strength at low temperatures and good elastic recovery at high reaction temperatures, consistent with typical polyolefin elastomers.

Unveiling the Nature of lignin's Interaction with Molecules: A Mechanistic Understanding of Adsorption of Methylene Blue Dye.

The valorization of lignin into advanced materials for water and soil remediation is experiencing a surge in demand. However, it is imperative that material research and manufacturing be sustainable to prevent exacerbating environmental issues. Meeting these requirements necessitates a deeper understanding of the role of lignin's functional groups in attracting targeted species. This research delves into the interaction mechanisms between lignin and organic molecules, using the adsorption of the cationic dye Methylene Blue (MB+) as a case study. Herein, we aim to quantitatively estimate the contribution of different interaction types to the overall adsorption process. While carbonyl groups were found to have no significant role in attraction, carboxylic groups (-COOH) exhibited significantly lower adsorption compared with hydroxyl groups (-OH). Through alternately blocking aliphatic and phenolic -OH groups, we determined that 61% of the adsorption occurred through hydrogen bonding and 38% via electrostatic interactions. Performance studies of modified lignin along with spectroscopic methods (XPS, FTIR) confirmed the negligible role of π-π interactions in adsorption. This study offers fundamental insights into the mechanistic aspects of MB adsorption on lignin, laying the groundwork for potential modifications to enhance the performance of lignin-based adsorbents. The findings underscore the importance of hydroxyl groups and provide a roadmap for future studies examining the influence of steric factors and interactions with other organic molecules.

Electronic and Steric Effects on Oxygen Reactivities of NiFeSe Complexes Related to O2-Damaged [NiFeSe]-Hydrogenases’ Active Site

Hydrogen has the potential to serve as a new energy resource, reducing greenhouse gas emissions that contribute to climate change. Natural hydrogenases exhibit impressive catalytic abilities for hydrogen production, but they often lack oxygen tolerance. Oxygen-tolerant hydrogenases can work under oxygen by reacting with oxygen to form inactive states, which can be reactivated to catalytic states by oxygen atom removal. Herein, we synthesized three NiFeSe complexes: (NiSe(CH3)FeCp, NiSe(CH3)FeCp* and NiSe(PhNMe2)FeCp) with features of active sites of [NiFeSe]-H2ases, which are the oxygen-tolerant hydrogenases, and we investigated the influence of electronic and steric factors on the oxygen reaction of these “biomimetic” complexes. In our research, we found that they react with oxygen, forming 1-oxygen species, which is related to the O2-damaged [NiFeSe] active site. Through a comparative analysis of oxygen reactions, we have discovered that electronic factors and steric hindrance on Se play a significant role in determining the oxygen reactivity of NiFe complexes related to hydrogenases’ active sites.

Aromatic salt induced modulations in micellization behavior of amide functionalized surface-active ionic liquids: The role of cationic head group

The present study highlights the effect of aromatic salt i.e. sodium benzoate (NaBz) at fix concentration (1 mM), on the micellization behavior of four amide functionalized surface-active ionic liquids (SAILs) having different cationic head groups in aqueous medium. The adsorption behavior of the SAILs at the air-solution interface has been investigated by tensiometry, where improved surface activity was observed in all the investigated SAILs in the presence of added hydrotrope. The conductivity, steady-state fluorescence, dynamic light scattering (DLS), and zeta-potential measurements have been performed to probe the micellization of the SAILs in bulk solution. The position and orientation of aromatic anion, Bz-, at the micelle-water interface surface has been investigated by 1H NMR spectroscopy. The thermodynamic aspects of micellization have been examined by Isothermal titration calorimetry (ITC). It has been observed that the nature, geometry, and steric factor of the cationic head group of SAILs govern their interactions with Bz- and this influences the characteristic properties of micellization.

Pore-blocking steric mass-action model for adsorption of bioparticles

The steric mass-action (SMA) model has been widely reported to describe the adsorption of proteins in different types of chromatographic adsorbents. Here in the present work, a pore-blocking steric mass-action model (PB-SMA) was developed for the adsorption of large-size bioparticles, which usually exhibit the unique pore-blocking characteristic on the adsorbent and thus lead to a fraction of ligands in the deep channels physically inaccessible to bioparticles adsorption, instead of being shielded due to steric hindrance by adsorbed bioparticles. This unique phenomenon was taken into account by introducing an additional parameter, Lin, which is defined as the inaccessible ligand densities in the physically blocked pore area, into the PB-SMA model. This fraction of ligand densities (Lin) will be deducted from the total ligand (Lt) for model development, thus the steric factor (σ) in the proposed PB-SMA will reflect the steric shielding effect on binding sites by adsorbed bioparticles more accurately than the conventional SMA model, which assumes that all ligands on the adsorbent have the same accessibility to the bioparticles. Based on a series of model assumptions, a PB-SMA model was firstly developed for inactivated foot-and-mouth disease virus (iFMDV) adsorption on immobilized metal affinity chromatography (IMAC) adsorbents. Model parameters for static adsorption including equilibrium constant (K), characteristic number of binding sites (n), and steric factor (σ) were determined. Compared with those derived from the conventional SMA model, the σ values derived from the PB-SMA model were dozens of times smaller and much closer to the theoretical maximum number of ligands shielded by a single adsorbed iFMDV, indicating the modified model was more accurate for bioparticles adsorption. The applicability of the PB-SMA model was further validated by the adsorption of hepatitis B surface antigen virus-like particles (HBsAg VLPs) on an ion exchange adsorbent with reasonably improved accuracy. Thus, it is considered that the PB-SMA model would be more accurate in describing the adsorption of bioparticles on different types of chromatographic adsorbents.

Mechanistic Insights into Rare-Earth-Catalyzed Alternating Copolymerization through C-H Polyaddition of Functionalized Organic Compounds to Unconjugated Dienes.

Density functional theory (DFT) calculations have been conducted to elucidate the detailed mechanisms of yttrium-catalyzed C-H polyaddition of 1,4-dimethoxybenzene (DMB) to 1,4-divinylbenzene (DVB). It was computationally determined that DMB not only serves as a substrate but also performs a crucial role as a ligand, stabilizing the catalytically active species and promoting alkene insertion. Side pathways involving Cβ-H activation and C═C continuous insertion were excluded due to steric and electronic factors, respectively, explaining why the reaction occurred efficiently and selectively to give perfectly alternating DMB-DVB polymers. Interestingly, the theoretical prediction of the reactivity of N,N-dimethyl-1,4-phenylenediamine and 2,2'-biethyl-4,4'-bipyridine reveals significant differences in the coordination effects of these substrates, leading to distinct mechanisms, primarily influenced by their steric effects. These findings shed new light on the previously overlooked role of substrate ligand effects in rare-earth-catalyzed step-growth copolymerization reactions.

Effect of the U-Shaped Cavity of Conformationally Flexible Chiral Lewis-Acidic Boron-Based Catalysts in Multiselective Diels-Alder Reactions.

The effect of the U-shaped cavity of conformationally flexible chiral Lewis acidic boron-based catalysts in multiselective Diels-Alder reactions was investigated. The U-shaped catalysts can recognize substituents at the terminal acetylene moiety of propynal based on steric factors and can also recognize alkyne and alkene substrates based on the match/mismatch between the catalysts and substrates. Moreover, even in a mixture of different catalysts and substrates, the desired competitive reactions can proceed multiselectively. This proof-of-concept study should contribute to the development of artificial enzyme-like catalysis in vitro.