Steelhead Oncorhynchus Mykiss Research Articles

Flavobacterium psychrophilum Infections in Salmonid Broodstock and Hatchery-Propagated Stocks of the Great Lakes Basin.

Bacterial coldwater disease (BCWD), caused by Flavobacterium psychrophilum, threatens wild and propagated salmonids worldwide and leads to substantial economic losses. In addition to being horizontally transmitted, F. psychrophilum can be passed from infected parents to their progeny, furthering the negative impacts of this pathogen. In Michigan, both feral and captive salmonid broodstocks are the gamete sources used in fishery propagation efforts. A 5-year study was initiated to follow the prevalence of systemic F. psychrophilum infections in feral broodstocks of four species (steelhead Oncorhynchus mykiss [potadromous Rainbow Trout]; Coho Salmon O. kisutch; Chinook Salmon O. tshawytscha; and Atlantic Salmon Salmo salar) residing in three Great Lakes watersheds. Additionally, captive broodstocks of four species (Rainbow Trout, Brown Trout Salmo trutta, Lake Trout Salvelinus namaycush, and Brook Trout Salvelinus fontinalis) maintained at two facilities were assessed for the presence of F. psychrophilum. The resultant offspring from each broodstock population were sampled for F. psychrophilum infections multiple times throughout hatchery residency. Using selective flavobacterial culture and PCR confirmation, F. psychrophilum was detected in all broodstocks except the captive Lake Trout and Brook Trout. Logistic regression analysis demonstrated that among the infected feral broodstocks, Chinook Salmon from the Lake Michigan watershed had the highest prevalence of systemic F. psychrophilum infection (mean = 63.2%). Among the captive broodstocks, the Gilchrist Creek strain of Brown Trout had the highest infection prevalence (mean = 5%). Collectively, the captive broodstocks were found to have significantly lower infection prevalence than the feral broodstocks. Despite the high prevalence of systemic F. psychrophilum infections in many broodstock populations, the bacterium was rarely detected in their progeny during hatchery rearing. However, heavy losses associated with clinical BCWD outbreaks did occur. Collectively, our results reinforce that BCWD continues to threaten Great Lakes basin salmonids.

Natural Productivity in Steelhead Populations of Natural and Hatchery Origin—Assessing Hatchery Spawner Influence: Response to Comment

This response to the comment by Carmichael et al. (2015, this issue) makes reference to the natural productivity of steelhead Oncorhynchus mykiss expressed as either (1) the number of natural-origi...

Multi-population analysis of Puget Sound steelhead survival and migration behavior

Until recently, research on mortality of anadromous fishes in the marine environment was largely limited to estimates of total mortality and association with group characteristics or the environment. Advances in sonic transmitter technology now allow estimates of survival in discrete marine habitats, yielding important information on species of conservation concern. Previous telemetry studies of steelhead Oncorhynchus mykiss smolts in Puget Sound, Washington, USA indicated that approx. 80% of fish entering marine waters did not survive to the Pacific Ocean. The present study re-examined data from previous research and incorporated data from additional Puget Sound populations (n = 7 wild and 6 hatchery populations) tagged during the same period (2006−2009) for a comprehensive analysis of steelhead early marine survival. We used mark-recapture models to examine the effects of several factors on smolt survival and to identify areas of Puget Sound where mortality rates were highest. Wild smolts had higher survival probabilities in general than hatchery smolts, with exceptions, and wild smolts released in early April and late May had a higher probability of survival than those released in early and mid-May. Steelhead smolts suffered greater instantaneous mortality rates in the central region of Puget Sound and from the north end of Hood Canal through Admiralty Inlet than in other monitored migration segments. Early marine survival rates were low (16.0 and 11.4% for wild and hatchery populations, respectively) and consistent among wild populations, indicating a common rather than watershed-specific mortality source. With segment-specific survival information we can begin to identify locations associated with high rates of mortality, and identify the mechanisms responsible.

A Survey of Steelhead Age and Iteroparity Rates from a Volunteer Angler Program in the Willamette River Basin, Oregon

AbstractThe iteroparous life history of steelheadOncorhynchus mykisscan provide genetic variability and increase recruitment, thereby sustaining populations. Steelhead are difficult to survey given that (1) they spawn during high river flows, which can flush carcasses away; (2) they spend a short time on the spawning grounds; (3) nonspawning fish are elusive; and (4) adults that do not die after spawning can evade surveyors. An angler volunteer program was implemented in Oregon to monitor steelhead populations. Recreational anglers collected scales from 2,216 steelhead in the Willamette River basin during 1981–1994; the scales were used to estimate ages and iteroparity rates. A freshwater age of 2 and a saltwater age of 2 were the most common, followed by saltwater ages 3 and 4. The incidence of iteroparity was greater among female steelhead than among males and was greater for winter‐run steelhead than for summer‐run fish. Wild fish had a higher incidence of repeat spawning than hatchery fish, which may be partly attributable to hatchery practices (e.g., recycling the fish through the fishery or using them for spawning). These results agree with previously published information for steelhead. The overall iteroparity rate of 3.4% for Willamette River basin steelhead appears to be moderate in comparison with other populations; for instance, iteroparity in Willamette River steelhead was much lower than rates for Oregon coastal stocks, was similar to rates for lower Columbia River stocks, and was higher than rates for interior Columbia River stocks. I offer the following hypotheses to explain these geographical trends in iteroparity: (1) Willamette River basin steelhead have a greater distance to migrate than coastal stocks and iteroparity may be selected against by barriers to adult and juvenile passage, (2) similar iteroparity rates for Willamette River basin and lower Columbia River steelhead stocks suggest similarity in migratory conditions, and (3) by contrast, the interior Columbia River stocks have a longer migration distance and also experience challenges associated with the hydropower system.Received December 12, 2014; accepted July 30, 2015

Using Redd Attributes, Fry Density, and Otolith Microchemistry to Distinguish the Presence of Steelhead and Rainbow Trout in the Elwha River Dam Removal Project

AbstractThe removal of impassable dams can affect stream fish communities in many ways, including allowing previously separated anadromous and resident life history types to intermingle. Recolonization of steelheadOncorhynchus mykiss(anadromous Rainbow Trout) into areas that were previously occupied solely by resident conspecifics presents a challenge for monitoring because (1) staging or spawning adults may be difficult to directly observe; and (2) the offspring of the two life history forms are indistinguishable during early life. We evaluated the utility of using redd attributes, fry (age‐0) size, and fry density to distinguish the presence of steelhead and Rainbow Trout in the Elwha River, Washington. Redd area and substrate size differed between forms: steelhead redds were significantly larger and had a greater median substrate particle size than Rainbow Trout redds. Fry density was significantly higher in steelhead spawning reaches than in Rainbow Trout reaches during both survey years (2010 and 2011). Steelhead fry tended to be slightly larger than Rainbow Trout fry but not significantly so in either year. Additionally, otolith microchemical analyses indicated that all fry collected from newly colonized habitat were of steelhead maternal origin, and these fish were intermediate in size to the steelhead and Rainbow Trout fry collected prior to dam removal. Thus, fry size may not effectively differentiate parental origin despite the tendency of anadromous parents to be larger and to spawn earlier than residents. Redd attributes and fry density may be useful for evaluating the spatial distributions and relative abundances of steelhead and Rainbow Trout after dam removal. Our results have implications for other dam removal projects and other monitored species.Received April 13, 2015; accepted July 3, 2015

Estimating Cohort Survival through Tributaries for Salmonid Populations with Variable Ages at Migration

AbstractSurvival of juvenile anadromous Pacific salmonids from their earliest age of seaward movement (“out‐migration”) through the tributaries that connect their rearing grounds to larger‐order rivers (“cohort survival”) is an important yet often unmonitored factor in the complex life history of these species. Populations with variable age at out‐migration (e.g., steelhead Oncorhynchus mykiss) or multiple juvenile rearing strategies (e.g., Chinook Salmon O. tshawytscha) raise particular challenges in survival monitoring. A multiple‐state release–recapture model is presented to estimate cohort survival for salmonid species with variable age at out‐migration and demonstrated in two case studies. Annual releases of fish tagged with passive integrated transponder (PIT) tags from the same brood year (cohort) and their detections by instream PIT‐tag detection arrays in tributaries and at hydroelectric dams are used to estimate survival through tributaries and the age composition of juvenile migrants reaching downstream sites. The 2010 cohort of Chinook Salmon from the Chiwawa River in Washington State had estimated survival of 0.59 to the middle Wenatchee River array in Tumwater Dam Reservoir (river distance of 30 km) and 0.12 to McNary Dam (364 km) on the Columbia River. The age composition shifted from 60.1% subyearlings at the Wenatchee River array to 100% yearlings at McNary Dam, reflecting the use of the Wenatchee River as a nonnatal rearing area, whereas McNary Dam is in the migratory corridor. The 2010 cohort of steelhead from the Twisp River in Washington State had estimated survival from the yearling stage of 0.30 to Rocky Reach Dam (146 km from the Twisp River mouth) on the Columbia River and 0.17 to McNary Dam (439 km). The low survival to the Columbia River resulted from both mortality and adoption of a resident life history and reflects the diverse population structure in the Twisp River.Received February 4, 2015; accepted June 11, 2015

Seasonal Rearing Habitat in a Large Mediterranean-Climate River: Management Implications at the Southern Extent of Pacific Salmon (Oncorhynchusspp.)

Pacific salmon (Oncorhynchus) use a variety of rearing environments prior to seaward migration, yet large river habitats and their use have not been well defined, particularly at the southernmost salmon range where major landscape-level alterations have occurred. We explored juvenile Chinook salmon (Oncorhynchus tshawytscha) and steelhead (Oncorhynchus mykiss) presence along the river continuum and in main-channel and off-channel habitats of a regulated California Mediterranean-climate river. Over an 8-year period, off-channels of the lower Mokelumne River exhibited slower and warmer water than the main-channel. Probability of salmonid presence varied by stream reach and habitat types. Steelhead and Chinook salmon both demonstrated transitional responses to the dry season, with juveniles leaving off-channels by midsummer. This corresponded to flow recession, increasing water temperatures, salmonid growth and end of emigration period. Main-channel steelhead observations continued until the following storm season, which brought cool flood flows to reconnect off-channels and the next juvenile cohort of both species to the river. Within arid climates, low-gradient off-channels appear more transiently used than in cooler and more northern humid climate systems. Within a highly regulated Mediterranean-climate river, off-channel habitats become increasingly scarce, disconnected or temperature limiting in low-gradient reaches both seasonally and due to anthropogenic modifications. These observations may provide guidance for future management within large salmon streams. Copyright © 2015 John Wiley & Sons, Ltd.

Consequences of Emergence Timing for the Growth and Relative Survival of Steelhead Fry from Naturally Spawning Wild and Hatchery Parents

AbstractFor many fishes, reproducing early in the year may present tradeoffs for the offspring: the drawbacks associated with harsh environmental conditions may be offset by advantages in competition for food and space. We investigated this tradeoff in a system where hatchery‐origin steelhead Oncorhynchus mykiss were bred to spawn about 4 months earlier than wild‐origin fish. Hatchery‐origin adults were released into the wild and spawned in common with wild steelhead. Naturally spawned offspring from these matings were assigned to hatchery, wild, and hybrid lineages by using a panel of 96 single‐nucleotide polymorphisms. We then evaluated whether fry abundance, body size and condition, and geographic distribution differed based on parental lineage. The observed mixture proportions were 0.007 hatchery‐lineage, 0.289 hybrid, and 0.704 wild‐lineage juveniles, despite the predominance of hatchery‐origin parents. There were significant differences in FL (hatchery > hybrid > wild) but no difference in body condition. We modeled the emergence dates of the sampled fry and estimated that 96.0% of wild‐lineage fish emerged after the arrival of temperate spring conditions (reduced flows and warmer temperatures) compared with 80.4% of hybrids and 41.2% of hatchery‐lineage fish. We hypothesize that the low abundance of pure hatchery‐lineage fry may be due to a mismatch between the timing of breeding by the parents and suitable river conditions, resulting in low survival and physical displacement of hatchery‐lineage fry from the system. Thus, the advantages of early emergence and large size associated with hatchery origin did not mitigate the disadvantages of early spawning in this case.

Variation in Juvenile Steelhead Density in Relation to Instream Habitat and Watershed Characteristics

AbstractPhysical habitat characteristics can affect the abundance and distribution of organisms, and are frequently used to predict the standing crop of stream fish for purposes of understanding their ecology and better direct management. However, the spatial scale of the investigation and the resolution of the data can affect the outcome of such analyses. In this study we coupled watershed‐level characteristics with instream habitat variables to model the density of two age‐classes of juvenile steelhead Oncorhynchus mykiss in a watershed in the Clearwater River basin, Idaho. Density varied considerably across time and space. Variance partitioning showed that 41–50% of the variances in density were due to unexplained differences between sampling occasions (residual variance), and the rest resulted from variation at the site and site‐and‐year levels, depending on the age‐class. Instream habitat variables better explained the variation in density than did models that included watershed‐level characteristics. The density of subyearling steelhead was best explained by stream discharge, with a negative relationship. The density of yearling steelhead was best explained by a negative relationship with average weekly temperature; however, this relationship was statistically indistinguishable from zero. Finally, total density (subyearlings and yearlings combined) was best explained by discharge and average daily temperature. We believe that our approach is useful for identifying the physical factors associated with the density of stream salmonids, but we stress that findings from correlative studies should be interpreted in concert with detailed knowledge about life history variation in the study system.

Evaluation of Steelhead Passage Flows Using Hydraulic Modeling on an Unregulated Coastal California River

Passage and habitat connectivity flows for steelhead Oncorhynchus mykiss through depth sensitive natural, low gradient, critical riffle sites were investigated in the unregulated Big Sur River, California. The River2D two-dimensional hydraulic habitat model, along with quantitative passage metrics and species-specific and lifestage-specific depth criteria, were used to evaluate and compare predicted fish passage flows with flows derived by a traditional empirical critical riffle fish passage method. Passage flows were also compared with historical unimpaired natural hydrology patterns to assess the frequency and duration of suitable passage flows under the naturally variable flow regimes characteristic of Central California coastal rivers. A strong relationship (r 2 = 0.93) was observed between flows predicted by hydraulic modeling and flows identified by the empirical critical riffle method. River2D provided validation that the flows derived using the traditional critical riffle methodology provided for contiguous passable pathways of suitable hydraulic (depth and velocity) conditions through complex cobble-dominated riffle sites. Furthermore, steelhead passage flows were spatially and temporally consistent between lagoon and upstream riffles for adults, and were generally indicative of a river system in equilibrium with a naturally variable flow regime and associated intact ecological processes. An analysis of 25years of continuous flow data indicated sufficient flows for upstream passage by young-of-year and juvenile steelhead were produced between 37% and 100% and between 1% and 95% of the time, respectively. September and October are the most challenging months for natural flows to meet young-of-year and juvenile passage and habitat connectivity flows. Careful consideration of seasonal and interannual flow variability dynamics, therefore, are critical components of an effective flow management strategy for the maintenance and protection of passage and habitat connectivity flows between lagoon and upriver habitats. Published 2015. This article is a U.S. Government work and is in the public domain in the USA.

Quantifying Avian Predation on Fish Populations: Integrating Predator‐Specific Deposition Probabilities in Tag Recovery Studies

AbstractAccurate assessment of specific mortality factors is vital to prioritize recovery actions for threatened and endangered species. For decades, tag recovery methods have been used to estimate fish mortality due to avian predation. Predation probabilities derived from fish tag recoveries on piscivorous waterbird colonies typically reflect minimum estimates of predation due to an unknown and unaccounted‐for fraction of tags that are consumed but not deposited on‐colony (i.e., deposition probability). We applied an integrated tag recovery modeling approach in a Bayesian context to estimate predation probabilities that accounted for predator‐specific tag detection and deposition probabilities in a multiple‐predator system. Studies of PIT tag deposition were conducted across three bird species nesting at seven different colonies in the Columbia River basin, USA. Tag deposition probabilities differed significantly among predator species (Caspian terns Hydroprogne caspia: deposition probability = 0.71, 95% credible interval [CRI] = 0.51–0.89; double‐crested cormorants Phalacrocorax auritus: 0.51, 95% CRI = 0.34–0.70; California gulls Larus californicus: 0.15, 95% CRI = 0.11–0.21) but showed little variation across trials within a species or across years. Data from a 6‐year study (2008–2013) of PIT‐tagged juvenile Snake River steelhead Oncorhynchus mykiss (listed as threatened under the Endangered Species Act) indicated that colony‐specific predation probabilities ranged from less than 0.01 to 0.17 and varied by predator species, colony location, and year. Integrating the predator‐specific deposition probabilities increased the predation probabilities by a factor of approximately 1.4 for Caspian terns, 2.0 for double‐crested cormorants, and 6.7 for California gulls compared with traditional minimum predation rate methods, which do not account for deposition probabilities. Results supported previous findings on the high predation impacts from strictly piscivorous waterbirds nesting in the Columbia River estuary (i.e., terns and cormorants), but our findings also revealed greater impacts of a generalist predator species (i.e., California gulls) than were previously documented. Approaches used in this study allow for direct comparisons among multiple fish mortality factors and considerably improve the reliability of tag recovery models for estimating predation probabilities in multiple‐predator systems.Received August 1, 2014; accepted November 11, 2014

Evidence of between-population variation in morphology and thermal plasticity of agonistic behavior in two genetically distinct populations of steelhead (Oncorhynchus mykiss)

Morphological and behavioral traits affect an individual’s fitness and can reflect both evolutionary adaptations and phenotypic responses to environmental conditions. We conducted a reciprocal transplant ‘common garden’ experiment at two temperature regimes to test for phenotypic plasticity in morphological and behavioral traits between and within two populations of steelhead Oncorhynchus mykiss from Hood Canal, WA, USA. The Dewatto River and Duckabush River populations exhibited asymmetric changes in body morphology in response to the two temperature regimes, suggesting both between- and within-population variation in morphological plasticity. In most cases, within population variation in body shapes was less than between temperature regimes. Most notably the populations differed in dorso-ventral and caudal regions, body depth, and head shape, with some differences on the anterior-posterior placement of the dorsal and ventral fins. The warm temperature regime caused more exploratory behavior, more charging behavior, and higher fin erosion, and population effects included slight differences in feeding aggression frequency. Morphology appeared to vary more between populations than between temperature regimes, and behavioral traits varied more between temperature regimes than between populations. Morphological variation may reflect adaptations to variation in freshwater habitat conditions, and both populations show behavioral plasticity in response to temperature. This study sheds new light on the role of genetic and environmental influence on morphology and behavior in juvenile steelhead.

Juvenile Salmonid Utilization of Floodplain Rearing Habitat After Gravel Augmentation in a Regulated River

Gravel augmentation is used in sediment-starved streams to improve salmonid spawning habitat. As gravel is added to river channels, water surface elevations may rise in adjacent areas, activating floodplain habitat at lower flows, and floodplains inundate more frequently, potentially affecting the quantity and quality of juvenile salmonid rearing habitat. We analysed 5 years of juvenile Chinook salmon Oncorhynchus tschawytscha and steelhead Oncorhynchus mykiss data from snorkel surveys before and after gravel augmentation in the Lower American River, a low-gradient, highly regulated alluvial river in California's Central Valley. We measured the quality and quantity of rearing habitat (current velocity and areal extent of inundated riparian vegetation) following gravel placement and tested whether these factors affected juvenile abundance. Gravel augmentation increased floodplain extent by 3.7–19.8%, decreased average flow velocity from 1.6 to 0.3 m s−1 and increased the amount of vegetative cover from 0.3% to 22.6%. Juvenile abundances increased significantly for both species following augmentation. However, the strength of the relationship between abundance and habitat variables was greater for smaller salmonids. These results suggest that, in addition to enhancing salmonid spawning habitat, gravel augmentation can improve rearing habitat where channel incision and/or regulated hydrographs disconnect floodplains from main river channels. Copyright © 2015 John Wiley & Sons, Ltd.

Characterization of Springtime Coliform Populations at the End Creek Wetland Restoration (Union Co., Oregon, USA): A Three-Year Study

In 2005, a 550-acre tract of agricultural land containing two small streams near La Grande, Oregon was registered in the U.S. Federal Wetlands Reserve Program. This designation was part of a plan to reclaim and restore the wetland to its natural state. Initial efforts at the End Creek Restoration Project restored both End Creek and South Fork Willow Creek to a natural course through rechanneling, and several plantings had restored some of the native flora. Since its establishment, the End Creek streams and floodplain have become a reserve for summer steelhead (Oncorhynchus mykiss), a threatened anadromous salmonid, and many migratory birds. The threatened Columbia Spotted Frog has also established itself in some of the ponds. As part of an effort to establish a baseline for water quality, we monitored total springtime coliform and fecal coliform bacteria in three of the End Creek ponds for three years. The results of this study indicate that, throughout any given spring, the numbers of both coliform and fecal coliform bacteria can fluctuate markedly among ponds on any given day, and that in any particular pond the numbers fluctuate from week to week. In addition, our analysis suggests that in early spring, the numbers of these organisms also fluctuate from year to year. The causes of these fluctuations are not well understood, but are expected to reflect both springtime flooding and the migrations of source animals such as waterfowl and cervids. Information gathered from this study will help inform future management activities on the wetland.

Quantitative Assessment of Scale Resorption in Migrating and Spawning Steelhead of the Snake River Basin

AbstractScales have been used for decades as a tool to interpret life histories in steelhead Oncorhynchus mykiss. Resorption can affect the accuracy of life history interpretations based on scale patterns, depending on the amount of material resorbed. For example, resorption can affect the distinctiveness and characteristics of spawn checks. Spawn checks have been reported in iteroparous salmonids, but no published experimental studies have established the precise relationship between reproduction and scale features. Our objectives were (1) to quantify scale resorption, and (2) to identify contributing factors to the observed resorption in migrating and spawning Snake River steelhead. Prespawn and postspawn scale samples from 72 fish were paired for analysis. We found considerable individual variability in the amount of material resorbed between prespawn and postspawn samples (mean, 26%; SD, 13.7%). Most resorption occurred during the winter as gonads matured and secondary sex characteristics were formed. In over half of the postspawn samples, resorption was sufficient to obscure or eliminate an annulus. In a few cases, resorption was minor enough that the eventual spawn check may be indistinct or absent. We recommend that ancillary marks be investigated as a means to help identify weak spawn checks and an index of resorption developed to determine if resorption was sufficient to cause loss of an annulus.Received March 27, 2014; accepted August 5, 2014

Reduced reproductive success of hatchery fish from a supplementation program for naturalized steelhead in a Minnesota tributary to Lake Superior

Reduced reproductive success of hatchery fish spawning in the natural environment will reduce the ability of stocking programs to enhance wild populations. We used DNA-based parentage assignment to compare the reproductive success of wild fish and first-generation hatchery fish from a smolt stocking program that used broodstock from within the naturalized steelhead Oncorhynchus mykiss population in a Minnesota tributary to Lake Superior. The reproductive success of hatchery females was significantly lower than that of wild females (approximately 60%) in all three study years; however, the reproductive success of hatchery males was only significantly lower in one year. Higher reproductive success of wild fish was attributed to greater probability of success (i.e., having at least one offspring) and not differences in numbers of offspring among successful parents. Generalized linear models indicated that run timing was associated with probability of success although this did not explain differences between hatchery and wild fish. Despite runs that extended 7–9 weeks, most successful adults arrived in the first three weeks of the run (85–98% of all successful females, 98–100% of successful males). The early part of the run corresponded to periods of high flow, which likely increased access to quality spawning and rearing habitat higher upstream in the system. Relationships between fish length and reproductive success were inconsistent. Managers may minimize potential environmental and genetic contributors to reduced performance by hatchery fish, but continued reliance on hatchery supplementation may hinder achievement of the long-term goal of a fishery supported largely by naturally reproducing populations.

The Effects of Rearing Density on Growth, Fin Erosion, Survival, and Migration Behavior of Hatchery Winter Steelhead

AbstractJuvenile winter steelhead Oncorhynchus mykiss at Eagle Creek National Fish Hatchery in Estacada, Oregon, were reared for three brood years (2004–2006) at raceway densities of 7,500 (214 fish/m3), 15,000 (429 fish/m3), and 22,500 fish (643 fish/m3) to determine the effects of rearing density on growth, fin erosion, survival, adult yield, and migration behavior. Coded wire tags were used to evaluate adult survival, and fish were radio‐tagged to monitor migration times from the hatchery to the mouth of Eagle Creek following volitional release from the hatchery. We found rearing density had a significant effect (P < 0.05) on steelhead growth, fin erosion, and adult survival. Winter steelhead reared in low‐density raceways (13.6 kg/m3 at release) were significantly larger at release, larger at return, had significantly better dorsal fin condition, and had significantly greater smolt‐to‐adult survival rates than did those reared in medium (23.4 kg/m3) and high (35.2 kg/m3) density raceways. No significant relationship between smolt size at release and migration timing was detected; however, the effect of rearing density on fish migration was noticeable in brood year 2004. In that year (2004), smolts from the medium‐ and high‐density groups took from 6 to15 d longer to out‐migrate than those from the low‐density group.

Relationship between Juvenile Fish Condition and Survival to Adulthood in Steelhead

AbstractUnderstanding how individual characteristics are associated with survival is important to programs aimed at recovering fish populations of conservation concern. To evaluate whether individual fish characteristics observed during the juvenile life stage were associated with the probability of returning as an adult, juvenile steelhead Oncorhynchus mykiss from two distinct population segments (DPSs; Snake River and upper Columbia River) were captured, photographed to determine external condition (body injuries, descaling, signs of disease, fin damage, and ectoparasites), measured, classified by rearing type (hatchery, wild), marked with a PIT tag, and released to continue out‐migration to the Pacific Ocean during 2007–2010. The PIT tags of returning adults were interrogated in fishways at hydroelectric dams on the lower Columbia River 1–3 years following release as juveniles. Juvenile‐to‐adult survival models were investigated independently for each DPS and indicated that similar individual fish characteristics were important predictors of survival to adulthood for both steelhead populations. The data analysis provided strong support for survival models that included explanatory variables for fish length, rearing type, and external condition, in addition to out‐migration year and timing. The probability of a juvenile surviving to adulthood was positively related to length and was higher for wild fish compared with hatchery fish. Survival was lower for juveniles with body injuries, fin damage, and external signs of disease. Models that included variables for descaling and ectoparasite infestation, however, had less support than those that incorporated measures of body injuries, fin damage, and disease. Overall, results indicated that individual fish characteristics recorded during the juvenile life stage can be used to predict adult survivorship in multiple steelhead populations.Received August 20, 2013; accepted February 14, 2014

Size‐Selective Mortality of Steelhead during Freshwater and Marine Life Stages Related to Freshwater Growth in the Skagit River, Washington

AbstractWe evaluated freshwater growth and survival from juvenile (ages 0–3) to smolt (ages 1–5) and adult stages in wild steelhead Oncorhynchus mykiss sampled in different precipitation zones of the Skagit River basin, Washington. Our objectives were to determine whether significant size‐selective mortality (SSM) in steelhead could be detected between early and later freshwater stages and between each of these freshwater stages and returning adults and, if so, how SSM varied between these life stages and mixed and snow precipitation zones. Scale‐based size‐at‐annulus comparisons indicated that steelhead in the snow zone were significantly larger at annulus 1 than those in the mixed rain–snow zone. Size at annuli 2 and 3 did not differ between precipitation zones, and we found no precipitation zone × life stage interaction effect on size at annulus. Significant freshwater and marine SSM was evident between the juvenile and adult samples at annulus 1 and between each life stage at annuli 2 and 3. Rapid growth between the final freshwater annulus and the smolt migration did not improve survival to adulthood; rather, it appears that survival in the marine environment may be driven by an overall higher growth rate set earlier in life, which results in a larger size at smolt migration. Efforts for recovery of threatened Puget Sound steelhead could benefit by considering that SSM between freshwater and marine life stages can be partially attributed to growth attained in freshwater habitats and by identifying those factors that limit growth during early life stages.Received December 3, 2013; accepted February 25, 2014

Loss of Genetic Integrity in Hatchery Steelhead Produced by Juvenile‐Based Broodstock and Wild Integration: Conflicts in Production and Conservation Goals

AbstractWe examined whether a supplementation program for steelhead Oncorhynchus mykiss in southwestern Washington could produce hatchery fish that contained genetic characteristics of the endemic population from which it was derived and simultaneously meet a production goal. Hatchery fish were produced for three consecutive years by using broodstock comprised of endemic juveniles that were caught in the wild and raised to maturity, and then the program transitioned to an integrated broodstock comprised of wild and hatchery adults that returned to spawn. Importantly, some auxiliary conservation‐based husbandry protocols were attempted (i.e., pairwise mating between males and females) but not always completed due to insufficient broodstock and conflict between production and conservation goals. The hatchery met production goals in 6 of 9 years, but wild‐type genetic integrity of hatchery fish was degraded every year. Specifically, we analyzed 10 microsatellites and observed a 60% reduction in the effective number of breeders in the hatchery (harmonic mean of hatchery, Nb = 45, compared with the wild, Nb = 111). Hatchery fish consequently displayed reduced genetic diversity and large temporal genetic divergence compared with wild counterparts. To ensure the benefit of conservation‐based husbandry, spawning protocols should be based on scientific theory and be practical within the physical and biological constraints of the system. Finally, if conservation issues are considered to be the most important issue for hatchery propagation, then production goals may need to be forfeited.Received November 8, 2013; accepted February 19, 2014