Staple Food Crop Research Articles

A Comprehensive Analysis of Drought Stress Responses in Rice (Oryza sativa L.): Insights into Developmental Stage Variations from Germination to Grain Filling

Rice (Oryza sativa L.) is a critical staple food crop vulnerable to drought stress at key growth stages, namely the early seedling stage, vegetative phase, anthesis (reproductive stage), and grain ripening stage. The impact of drought stress on rice extends beyond mere water deficit, influencing a spectrum of morphological, physiological, biochemical, and molecular responses crucial for plant survival and productivity. This review synthesizes current understanding of rice responses to drought stress across its developmental stages, encompassing seed germination, seedling establishment, vegetative growth, reproductive development, and grain filling. Drought stress triggers multifaceted adaptations in rice, involving mechanisms such as escape, avoidance, tolerance, and recovery strategies to mitigate water scarcity effects. These responses are finely tuned across developmental stages, influencing traits like root architecture, stomatal conductance, photosynthetic efficiency, osmotic adjustment, and hormonal regulation. Understanding these responses is pivotal for enhancing rice resilience to drought, thereby safeguarding global food security and supporting the livelihoods of rice-dependent communities worldwide, particularly in regions like India where rice cultivation plays a crucial socioeconomic role. Challenges persist in deciphering the complex genetic and physiological networks underpinning drought responses in rice. Integrating omics approaches and advanced phenotyping techniques holds promise in unraveling these complexities and identifying genetic markers for drought tolerance. Furthermore, strategies such as breeding resilient cultivars and implementing agronomic practices tailored to specific growth stages are imperative for sustainable rice production under increasingly erratic climatic conditions. This review consolidates existing knowledge while highlighting gaps in current understanding, aiming to guide future research endeavors toward innovative solutions for enhancing rice drought resilience. By elucidating the intricate mechanisms governing rice responses to drought stress, this study contributes to the broader discourse on agricultural sustainability and climate change resilience in staple food crops.

Assessing the efficacy of novel systemic insecticides on rice stem borers and their impact on beneficial insect fauna survival

Rice (Oryza sativa L.) is a staple food crop worldwide, but its production is threatened by pests like rice stem borers. Effective pest management strategies are crucial for ensuring high yields and food security. In this study, the effectiveness of various insecticides was evaluated against rice stem borers while considering their impact on the survival of beneficial insect fauna. Five treatments were tested: chlorantraniliprole, chlorantraniliprole + thiamethoxam, fipronil, flubendiamide, and a control group. The efficacy of each treatment was assessed by measuring pre- and post-treatment infestation levels of deadhearts and whiteheads, along with the survival percentage of beneficial insect fauna after one week. Chlorantraniliprole exhibited the highest effectiveness, with post-treatment percent infestation of deadhearts reduced to 2.10% after 72 hours and 1.24% after one week, and an effectiveness rate of 82.53% after 72 hours and 91.17% after one week. Chlorantraniliprole + thiamethoxam showed similar efficacy, with post-treatment percent infestation of deadhearts at 1.00% after 72 hours and 0.67% after one week, and an effectiveness rate of 91.71% after 72 hours and 95.18% after one week. Fipronil and flubendiamide also demonstrated significant effectiveness, albeit slightly lower than chlorantraniliprole-based treatments. The control group exhibited high post-treatment infestation levels and no effectiveness against deadhearts or whiteheads. However, the survival percentage of beneficial insect fauna was remarkably high in the control group. These findings highlight the potential of chlorantraniliprole and its combination with thiamethoxam as effective pest management options for rice cultivation, while emphasizing the importance of integrated approaches to minimize environmental impact. Further research is warranted to validate these results under diverse field conditions and optimize insecticide application protocols for sustainable rice production.

Proximal canopy sensing of twenty-two bread wheat genotypes for nutritional quality, yield attributes and grain yield under Mediterranean climate

To ensure nutritional security of rapidly increasing population, research interest has revitalized in determining the nutritional quality traits of staple food crops, especially wheat. Besides higher yield potential, research gaps exist regarding nutritional quality assessment of promising wheat genotypes grown under the Mediterranean climate. A field study was conducted to determine the relationship between yield components and quality characteristics of 22 bread wheat genotypes using the SPAD meter, GreenSeeker (NDVI), and CM-1000 chlorophyll meter at different growing stages (Stem elongation, Heading, Anthesis and Milk stage). The recorded findings revealed that G-41 genotype surpassed the rest of bread wheat genotypes by recording the maximum grain yield, whereas G-60 genotype exhibited the highest protein and wet gluten content. Among response variables, SPAD and NDVI values at the heading stage and CM-1000 values at the milk stage were found to be statistically insignificant. According to the correlation and biplot analysis, a significant positive correlation was found between the SPAD values measured for the stem elongation, anthesis and milk stage and yield and quality characteristics. Significant positive correlations were found between the NDVI values at the stem elongation, anthesis, and milk stages and the yield components, and between the CM-1000 value at the heading stage and the grain yield.

Multigenerational Drought Reveals a Stable Wheat Seed Fungal Community

Wheat ( Triticum spp.) is a staple food crop, providing a fifth of the world's protein and caloric needs. Our research examines the impact of multigeneration postflowering drought stress on the wheat seed endophytic fungal community. Understanding how wheat seed fungal communities respond to drought stress over several generations can improve our knowledge of legacy drought stress. In this article, we aim to identify seed-associated fungi that play critical roles within the wheat seed under drought stress conditions. We examined the endophytic seed fungal communities of three winter wheat cultivars, Catawba, Shirley, and USG 3640. Moderate drought was imposed on a subset of plants immediately after flowering, with plants relieved from drought stress after 1 week. Seeds harvested from generation 1 were planted for a second generation of drought experiments. When examining the postflowering drought impact on wheat physiology, drought-exposed plants consistently exhibited lower daily transpiration rates, chlorophyll-a values, and seed yield compared with control plants, indicating that drought implementation was successful. Internal transcribed spacer 1 metabarcoding revealed that wheat seed fungal community species richness decreased during postanthesis drought stress across both generations. We also observed that generation accounted for variation in fungal species richness and community structure, independent of drought treatment. The most abundant taxa recovered across all cultivars, treatments, and generations included Cladosporium, Penicillium, Alternaria, and Epicoccum. These results support our hypothesis that postanthesis drought shapes the wheat seed fungal community.

Synergistic effects of silicon and goethite co-application in alleviating cadmium stress in rice (Oryza sativa L.): Insights into plant growth and iron plaque formation mechanisms

Rice is one of the most important staple food crops; however, it is prone to cadmium (Cd) accumulation, which has negative health effects. Therefore, methods to reduce Cd uptake by rice are necessary. At present, there is limited research on the effects of co-application of silicon (Si) and goethite in mitigating Cd stress in rice. Furthermore, the specific mechanisms underlying the effects of their combined application on iron plaque formation in rice roots remain unclear. Therefore, this study analyzed the effects of the combined application of Si and goethite on the biomass, physiological stress indicators, Cd concentration, and iron plaques of rice using hydroponic experiments. The results revealed that co-treatment with both Si and goethite increased the plant height and dry weight, superoxide dismutase and catalase activities, photosynthetic pigment concentration, and root activity. Moreover, this treatment decreased the malondialdehyde concentration, repaired epidermal cells, reduced the Cd concentration in the roots by 57.2 %, and increased the number of iron plaques and Cd concentration by 150.9 % and 266.2 % in the amorphous and crystalline fractions, respectively. The Cd/Fe ratio in amorphous iron plaques also increased. Our findings suggest that goethite serves as a raw material for iron plaque formation, while Si enhances the oxidation capacity of rice roots. The application of a combination of Si and goethite increases the quantity and quality of iron plaques, enhancing its Cd fixation capacity. This study provides theoretical evidence for the effective inhibition of Cd uptake by iron plaques in rice, providing insights into methods for the remediation of Cd contamination.

Development Strategy of Leading Agricultural Commodities: Findings From LQ, GRM, and Shift-Share Analysis

This research aims to develop the potential of food crops as a first step in the development planning process. This research was conducted in Majalengka Regency and has resulted in three main studies. First, it identifies staple and non-staple food crops in the region. The data source used consists of time series data from 2018-2022, and primary data with sample determination using the Proportional Random Sampling method. The results of the analysis show that staple food crops in Kabupaten M consist of rice, corn, soybeans, peanuts and green beans, while non-staple food crops include cassava and sweet potatoes. Secondly, the study also indicated that rice is the main food crop in the region. Finally, maize and groundnuts were identified as priority crops for further development. These findings provide valuable information for agricultural development planning, focusing on the development of potential commodities.

Heat-stress-responsive HvHSFA2e gene regulates the heat and drought tolerance in barley through modulation of phytohormone and secondary metabolic pathways.

The heat stress transcription factor HSFA2e regulates both temperature and drought response via hormonal and secondary metabolism alterations. High temperature and drought are the primary yield-limiting environmental constraints for staple food crops. Heat shock transcription factors (HSF) terminally regulate the plant abiotic stress responses to maintain growth and development under extreme environmental conditions. HSF genes of subclass A2 predominantly express under heat stress (HS) and activate the transcriptional cascade of defense-related genes. In this study, a highly heat-inducible HSF, HvHSFA2e was constitutively expressed in barley (Hordeum vulgare L.) to investigate its role in abiotic stress response and plant development. Transgenic barley plants displayed enhanced heat and drought tolerance in terms of increased chlorophyll content, improved membrane stability, reduced lipid peroxidation, and less accumulation of ROS in comparison to wild-type (WT) plants. Transcriptome analysis revealed that HvHSFA2e positively regulates the expression of abiotic stress-related genes encoding HSFs, HSPs, and enzymatic antioxidants, contributing to improved stress tolerance in transgenic plants. The major genes of ABA biosynthesis pathway, flavonoid, and terpene metabolism were also upregulated in transgenics. Our findings show that HvHSFA2e-mediated upregulation of heat-responsive genes, modulation in ABA and flavonoid biosynthesis pathways enhance drought and heat stress tolerance.

ZmNF-YA1 Contributes to Maize Thermotolerance by Regulating Heat Shock Response.

Zea mays (maize) is a staple food, feed, and industrial crop. Heat stress is one of the major stresses affecting maize production and is usually accompanied by other stresses, such as drought. Our previous study identified a heterotrimer complex, ZmNF-YA1-YB16-YC17, in maize. ZmNF-YA1 and ZmNF-YB16 were positive regulators of the drought stress response and were involved in maize root development. In this study, we investigated whether ZmNF-YA1 confers heat stress tolerance in maize. The nf-ya1 mutant and overexpression lines were used to test the role of ZmNF-YA1 in maize thermotolerance. The nf-ya1 mutant was more temperature-sensitive than the wild-type (WT), while the ZmNF-YA1 overexpression lines showed a thermotolerant phenotype. Higher malondialdehyde (MDA) content and reactive oxygen species (ROS) accumulation were observed in the mutant, followed by WT and overexpression lines after heat stress treatment, while an opposite trend was observed for chlorophyll content. RNA-seq was used to analyze transcriptome changes in nf-ya1 and its wild-type control W22 in response to heat stress. Based on their expression profiles, the heat stress response-related differentially expressed genes (DEGs) in nf-ya1 compared to WT were grouped into seven clusters via k-means clustering. Gene Ontology (GO) enrichment analysis of the DEGs in different clades was performed to elucidate the roles of ZmNF-YA1-mediated transcriptional regulation and their contribution to maize thermotolerance. The loss function of ZmNF-YA1 led to the failure induction of DEGs in GO terms of protein refolding, protein stabilization, and GO terms for various stress responses. Thus, the contribution of ZmNF-YA1 to protein stabilization, refolding, and regulation of abscisic acid (ABA), ROS, and heat/temperature signaling may be the major reason why ZmNF-YA1 overexpression enhanced heat tolerance, and the mutant showed a heat-sensitive phenotype.

Camelina Intercropping with Pulses a Sustainable Approach for Land Competition between Food and Non-Food Crops

With increasing global attention toward the need for mitigating climate change, the transition to sustainable energy sources has become an essential priority. Introducing alternative oilseed crops, such as camelina (Camelina sativa L.), into intercropping systems with staple food crops can mitigate ILUC (indirect land use change) and their negative impact on biofuel production. The present study compared camelina + field pea intercropping (ICw + IP, winter sowing) and camelina + lentil intercropping (ICs + IL, spring sowing) with their respective single crops regarding weed control, soil coverage, yields, and camelina seed quality (1000-seed weight, oil, and fatty acid composition). The comparison between different cropping systems was conducted using a one-way ANOVA. Both intercropping improved weed control at an early stage but no differences in soil coverage were found. Camelina seed yield was negatively affected by the presence of peas, whereas the pulse was unaffected. Conversely, camelina seed yield was not affected when intercropped with lentils while lentils reduced their yield in the intercropping. Furthermore, when camelina was intercropped with lentils, a significant increase was reported in 1000-seed weight and α -linolenic acid (C18:3) compared with the sole-camelina. However, both intercropping systems had a land equivalent ratio (LER, based on total seed yield at maturity) higher than one. Defining the best combination of crops and the optimal sowing and harvesting settings remain key to increasing the adoption of intercropping systems by farmers.

The Effect of Biological Fertilizers and Inorganic Fertilizers on Upland Rice Plants (Oryza sativa L.) Growth and Production

Upland rice (Oryza sativa L.) is a staple food crop that produces rice, which is important in meeting Indonesia's food needs. This research aims to improve growth and increase the production of upland rice plants by providing biological fertilizer and inorganic fertilizer and getting the right combination dose for upland rice plants. This research was carried out at the experimental garden of the Faculty of Agriculture, Riau University, Bina Widya campus km 12.5, Pekanbaru. This research used a factorial completely randomized design (CRD) consisting of two factors the first factor was biological fertilizer consisting of four levels, namely: H0 : Control, H1 : 0.18 g of Agrimeth fertilizer, H2 :0.41 g Kayabio fertilizer, H3: 0.45 g Petro Biofertil fertilizer; The second factor is Phonska NPK fertilizer consisting of four levels, P0 : control, P1 : 1,4 g, P2: 2 g, P3 : 2.7 g per plant. The results showed that the interaction between the application of biological fertilizer and NPK Phonska fertilizer affected the number of grainy grains per panicle and the weight of milled dry grain. Providing biological fertilizer affects plant height, root dry weight, shoot dry weight, maximum number of tillers, number of productive tillers, number of grainy grains per panicle, percentage of grainy grains and weight of milled dry grains. Application of NPK Phonska fertilizer affects plant height, shoot dry weight, root dry weight, maximum number of tillers, number of productive tillers, number of grainy grains per panicle, percentage of grainy grains and weight of milled dry grains. The correct dose to improve the growth and production of upland rice plants of the Inpago 12 variety can be 0.45 g Petro Biofertil Biofertilizer with 2.7 g Phonska NPK per plant

A REVIEW ON IMPROVEMENT OF SALT TOLERANCE IN RICE (ORYZA SATIVA L) BY INCREASING ANTIOXIDANT DEFENCE SYSTEMS USING EXOGENOUS APPLICATION OF PROLINE

Rice (Oryza sativa L) stands as a staple food crop globally particularly in the regions with warm climates. However, its cultivation faces significant challenges from abiotic stresses like salinity, which hinder crop growth and productivity. Salinity stress disrupts essential physiological processes, leading to reduced yields and compromised food security. In response to this pressing concern, this review investigates the potential of exogenous proline application to enhance salt tolerance in rice. The study delves into the intricate mechanisms underlying salinity stress in rice plants, highlighting its detrimental effects on growth, ion balance, and cellular metabolism. Salinity-induced oxidative stress, characterized by the accumulation of reactive oxygen species (ROS), exacerbates cellular damage, impairing plant growth and development. Proline, an amino acid known for its multifaceted roles in stress mitigation, emerges as a promising candidate for enhancing salt tolerance in rice. Exogenous application of proline demonstrates significant improvements in rice growth, yield and physiological attributes under saline conditions. The study elucidates the impact of exogenous proline on various aspects of rice physiology, including seed germination, water relations, and oxidative stress mitigation. By enhancing nutrient uptake, maintaining ion homeostasis, and fortifying antioxidant defences, proline offers a promising avenue for sustainable rice production in the face of escalating salinity stress. In conclusion, this study underscores the pivotal role of exogenous proline in augmenting salt tolerance in rice, offering insights into novel strategies for mitigating the adverse effects of salinity stress on crop yields.

Advancing Nutritional Quality through Genomic Approaches for Biofortification in Cereal Crops: A Review

Hidden hunger, characterized by micronutrient deficiencies, remains a pervasive challenge in marginalized regions worldwide, where the main source of sustenance is cereal crops. This review study examines how improving the nutritional value of cereal crops through genetic "biofortification" could help fight hidden hunger. It focuses on the biochemical and genetic underpinnings of zinc, iron, and critical amino acid accumulation. While conventional breeding efforts have made significant contributions, the complex genetic nature of mineral content in grains presents challenges. In response, molecular techniques such as CRISPR/Cas genome editing offer promising solutions. The paper underscores the widespread prevalence of iron and zinc deficiencies, affecting over a large population. Children under five and pregnant and lactating women in developing countries are particularly vulnerable. Biofortification, defined as the breeding of staple food crops with elevated micronutrient levels, emerges as a cost-effective and sustainable strategy to improve health in resource-poor households. It discusses the transfer of genes and quantitative trait loci (QTLs) from wild and related species to cultivated wheat, emphasizing the need for marker-assisted selection and genomic selection to accelerate breeding progress. The emergence of CRISPR/Cas genome editing techniques in recent decades has revolutionized the field of plant breeding. The paper highlights the successful application of CRISPR/Cas9 in numerous cereal crops such as rice, wheat, maize and barley, to improve crop yields and nutritional content. It also explores the potential for precise base editing and gene expression modifications. However, challenges such as transformation efficiency, specific promoters, and ethical and regulatory concerns are also mentioned and discussed. In conclusion, genetic biofortification through CRISPR/Cas-mediated genome editing presents a promising avenue for alleviating hidden hunger in cereal-dependent regions.

The efficiency of chlorophyll fluorescence as a selection criterion for salinity and climate aridity tolerance in barley genotypes.

In the Near East and North Africa (NENA) region, crop production is being affected by various abiotic factors, including freshwater scarcity, climate, and soil salinity. As a result, farmers in this region are in search of salt-tolerant crops that can thrive in these harsh environments, using poor-quality groundwater. The main staple food crop for most of the countries in this region, Tunisia included, is barley. The present study was designed to investigate the sensitivity and tolerance of six distinct barley genotypes to aridity and salinity stresses in five different natural field environments by measuring their photosynthetic activity. The results revealed that tolerant genotypes were significantly less affected by these stress factors than sensitive genotypes. The genotypes that were more susceptible to salinity and aridity stress exhibited a significant decline in their photosynthetic activity. Additionally, the fluorescence yields in growth phases J, I, and P declined significantly in the order of humid environment (BEJ), semi-arid site (KAI), and arid environment (MED) and became more significant when salt stress was added through the use of saline water for irrigation. The stress adversely affected the quantum yield of primary photochemistry (φP0), the quantum yield of electron transport (φE0), and the efficiency by trapped excitation (ψ0) in the vulnerable barley genotypes. Moreover, the performance index (PI) of the photosystem II (PSII) was found to be the most distinguishing parameter among the genotypes tested. The PI of sensitive genotypes was adversely affected by aridity and salinity. The PI of ICARDA20 and Konouz decreased by approximately 18% and 33%, respectively, when irrigated with non-saline water. The reduction was even greater, reaching 39%, for both genotypes when irrigated with saline water. However, tolerant genotypes Souihli and Batini 100/1B were less impacted by these stress factors.The fluorescence study provided insights into the photosynthetic apparatus of barley genotypes under stress. It enabled reliable salinity tolerance screening. Furthermore, the study confirmed that the chlorophyll a fluorescence induction curve had an inflection point (step K) even before the onset of visible signs of stress, indicating physiological disturbances, making chlorophyll fluorescence an effective tool for identifying salinity tolerance in barley.

Phytochemical components and antioxidant properties of traditional Sudanese pearl millet non-alcoholic drink

Pearl millet is widely recognized for its exceptional nutritional benefits and adaptability to harsh environmental conditions. Due to these valuable traits, it has become a staple food crop in various regions across the globe. This study investigates the impact of traditional processing methods on the phytochemical composition and antioxidant properties of Hulu-mur, a popular non-alcoholic beverage derived from Sudanese pearl millet. Hulu-mur processing, comprising malting, fermentation, and baking, significantly alters the biochemical makeup of the final product. Moreover, the study highlights that different processing stages using three distinct pearl millet landraces (Dembi Red, Dembi White, and Dembi Yellow) result in varied effects on the phytochemical profile and antioxidant activities. Notably, significant variations were observed in total flavonoid content (TFC), total phenolic content (TPC), carotenoids, tannins, and gamma-aminobutyric acid (GABA) among the landraces and throughout the processing stages. Accordingly, Hulu-mur flakes from Dembi Yellow exhibited the highest GABA content, whereas Dembi Red showed superior results in terms of TPC, carotenoids, and tannins. These findings suggest that traditional processing techniques preserve and potentially enhance the health-promoting properties of pearl millet, positioning Hulu-mur as a valuable dietary addition with significant nutritional benefits.

Does the Green Economy Influence Environmental Sustainability? Nexus Between Staple Food Crops Consumption and Total Factor Productivity

Does the Green Economy Influence Environmental Sustainability? Nexus Between Staple Food Crops Consumption and Total Factor Productivity

Establishment of a high-yield intercropping system for maize and legumes under rainfed conditions in eastern Bhutan

ABSTRACT Maize-legume intercropping is a sustainable strategy to improve maize production for smallholder farmers. Maize is a staple food crop in Bhutan and integration of legumes with maize has been considered as an alternative option towards enhancing maize production in the country. Here, we conducted two studies in eastern Bhutan: first study (2021) to identify suitable legumes for intercropping with maize and second study (2022) to evaluate the effects of different maize-soybean intercropping patterns on grain yield, land use efficiency, and economic benefits. The maize-soybean intercropping system showed better productivity and economic viability than the kidney bean and groundnut systems in both the sites. Row intercropping and strip intercropping with 2 rows of maize alternating with 2 rows of soybean (2 M:2S) spaced 0.3 × 0.3 m showed stable and consistently higher grain yield at Lingmethang and Wengkhar (LING = 6.05 t ha−1; WENG = 8.37 t ha−1). The land equivalent ratio (LING = 1.78; WENG = 1.73) and net return (0.16 million Nu. ha−1 for LING and 0.21 million Nu. ha−1 for WENG) were notably higher for these intercropping methods. Our results suggest that the integration of legumes between conventional maize planting density, row intercropping and strip intercropping (2 M:2S) spaced at 0.3 × 0.3 m would be beneficial for achieving higher productivity for smallholder farmers in eastern Bhutan.

Morpho-Physiological Characterization of Potato (Solanum Tuberosum) Genotypes of the Andigenum and Phureja Group from the Working Collection of the Universidad De Nariño

This study presents the morpho-physiological characterization of potato (Solanum tuberosum) genotypes from the Andigenum and Phureja groups, cultivated at the Nariño, Colombia. The research addresses the vital role of genetic diversity in agricultural sustainability and food security, highlighting the importance of genetic resources for crop improvement and ecosystem stability. The study utilized a comprehensive morphological characterization based on both qualitative and quantitative descriptors to assess genetic variability within the university's potato collection. This approach allowed for the identification of duplicates, the enhancement of a morphological database, and insights into the genetic diversity of the collections. Using techniques like Multiple Correspondence Analysis (ACM) and Principal Component Analysis (PCA), distinct clusters of genotypes were identified, which were highly influenced by their ploidy levels. Results indicated significant morphological variation between diploid Phureja and tetraploid Andigenum genotypes. Phureja genotypes showed greater similarity among themselves compared to the more diverse Andigenum group. This morphological diversity is importante for the identification of specific traits beneficial for breeding programs, such as resistance to environmental stresses and diseases. The study underscores the importance of maintaining genetic diversity within potato germplasm collections, facilitating the selection of genotypes with desirable agronomic traits. The findings contribute significantly to the understanding of the genetic and morphological foundations necessary for the future genetic improvement of the potato, a staple food crop with profound implications for global food security. The geographic distribution of the genotypes also suggested a correlation between morphological traits and geographic locations, reinforcing the role of local adaptation in crop diversity and resilience.

Enhanced radiation use efficiency and grain filling rate as the main drivers of grain yield genetic gains in the CIMMYT elite spring wheat yield trial

Common wheat (Triticum aestivum L.) is a major staple food crop, providing a fifth of food calories and proteins to the world’s human population. Despite the impressive growth in global wheat production in recent decades, further increases in grain yield are required to meet future demands. Here we estimated genetic gain and genotype stability for grain yield (GY) and determined the trait associations that contributed uniquely or in combination to increased GY, through a retrospective analysis of top-performing genotypes selected from the elite spring wheat yield trial (ESWYT) evaluated internationally during a 14-year period (2003 to 2016). Fifty-six ESWYT genotypes and four checks were sown under optimally irrigated conditions in three phenotyping trials during three consecutive growing seasons (2018–2019 to 2020–2021) at Norman E. Borlaug Research Station, Ciudad Obregon, Mexico. The mean GY rose from 6.75 (24th ESWYT) to 7.87 t ha−1 (37th ESWYT), representing a cumulative increase of 1.12 t ha−1. The annual genetic gain for GY was estimated at 0.96% (65 kg ha−1 year−1) accompanied by a positive trend in genotype stability over time. The GY progress was mainly associated with increases in biomass (BM), grain filling rate (GFR), total radiation use efficiency (RUE_total), grain weight per spike (GWS), and reduction in days to heading (DTH), which together explained 95.5% of the GY variation. Regression lines over the years showed significant increases of 0.015 kg m−2 year−1 (p < 0.01), 0.074 g m−2 year−1 (p < 0.05), and 0.017 g MJ−1 year−1 (p < 0.001) for BM, GFR, and RUE_total, respectively. Grain weight per spike exhibited a positive but no significant trend (0.014 g year−1, p = 0.07), whereas a negative tendency for DTH was observed (− 0.43 days year−1, p < 0.001). Analysis of the top ten highest-yielding genotypes revealed differential GY-associated trait contributions, demonstrating that improved GY can be attained through different mechanisms and indicating that no single trait criterion is adopted by CIMMYT breeders for developing new superior lines. We conclude that CIMMYT’s Bread Wheat Breeding Program has continued to deliver adapted and more productive wheat genotypes to National partners worldwide, mainly driven by enhancing RUE_total and GFR and that future yield increases could be achieved by intercrossing genetically diverse top performer genotypes.

Identification of cysteine-rich receptor-like kinase gene family in potato: revealed StCRLK9 in response to heat, salt and drought stresses.

The investigation into cysteine-rich receptor-like kinases (CRLKs) holds pivotal significance as these conserved, upstream signalling molecules intricately regulate fundamental biological processes such as plant growth, development and stress adaptation. This study undertakes a comprehensive characterisation of CRLKs in Solanum tuberosum (potato), a staple food crop of immense economic importance. Employing comparative genomics and evolutionary analyses, we identified 10 distinct CRLK genes in potato. Further categorisation into three major groups based on sequence similarity was performed. Each CRLK member in potato was systematically named according to its chromosomal position. Multiple sequence alignment and phylogenetic analyses unveiled conserved gene structures and motifs within the same groups. The genomic distribution of CRLKs was observed across Chromosomes 2-5, 8 and 12. Gene duplication analysis highlighted a noteworthy trend, with most gene pairs exhibiting a Ka/Ks ratio greater than one, indicating positive selection of StCRLKs in potato. Salt and drought stresses significantly impacted peroxidase and catalase activities in potato seedlings. The presence of diverse cis -regulatory elements, including hormone-responsive elements, underscored their involvement in myriad biotic and abiotic stress responses. Interestingly, interactions between the phytohormone auxin and CRLK proteins unveiled a potential auxin-mediated regulatory mechanism. A holistic approach combining transcriptomics and quantitative PCR validation identified StCRLK9 as a potential candidate involved in plant response to heat, salt and drought stresses. This study lays a robust foundation for future research on the functional roles of the CRLK gene family in potatoes, offering valuable insights into their diverse regulatory mechanisms and potential applications in stress management.

CRISPR/Cas9-generated mutations in a sugar transporter gene reduce cassava susceptibility to bacterial blight.

Bacteria from the genus Xanthomonas are prolific phytopathogens that elicit disease in over 400 plant species. Xanthomonads carry a repertoire of specialized proteins called transcription activator-like (TAL) effectors that promote disease and pathogen virulence by inducing the expression of host susceptibility (S) genes. Xanthomonas phaseoli pv. manihotis (Xpm) causes bacterial blight on the staple food crop cassava (Manihot esculenta Crantz). The Xpm effector TAL20 induces ectopic expression of the S gene Manihot esculenta Sugars Will Eventually be Exported Transporter 10a (MeSWEET10a), which encodes a sugar transporter that contributes to cassava bacterial blight (CBB) susceptibility. We used CRISPR/Cas9 to generate multiple cassava lines with edits to the MeSWEET10a TAL20 effector binding site and/or coding sequence. In several of the regenerated lines, MeSWEET10a expression was no longer induced by Xpm, and in these cases, we observed reduced CBB disease symptoms post Xpm infection. Because MeSWEET10a is expressed in cassava flowers, we further characterized the reproductive capability of the MeSWEET10a promoter and coding sequence mutants. Lines were crossed to themselves and to wild-type plants. The results indicated that expression of MeSWEET10a in female, but not male, flowers is critical to produce viable F1 seed. In the case of promoter mutations that left the coding sequence intact, viable F1 progeny were recovered. Taken together, these results demonstrate that blocking MeSWEET10a induction is a viable strategy for decreasing cassava susceptibility to CBB and that ideal lines will contain promoter mutations that block TAL effector binding while leaving endogenous expression of MeSWEET10a unaltered.