Stages S2 Research Articles

FmRbohH Mediates ROS Generation and Enhances Pollen Tube Growth in Fraxinus mandshurica

Flowering plants require normal pollen germination and growth to be fertilized, but studies on the mechanism regulating pollen tube growth in Fraxinus mandshurica are limited. Here, we used transcriptomic data to study the oxidative phosphorylation pathway during pollen tube growth in Fraxinus mandshurica. Our study identified 8,734 differentially expressed genes during the stages S1 to S3 of pollen tube growth. Significant enrichment of the oxidative phosphorylation pathway, amino acid synthesis, protein processing in the ER, carbon metabolism, pyruvate metabolism, citrate cycle (TCA cycle), and glycolysis/gluconeogenesis were examined using the Kyoto Encyclopedia of Genes and Genomes, and 58 genes linked to ROS synthesis and scavenging during the S1–S3 stages were identified. Also, H2DCFDA staining confirmed ROS formation in the pollen and the pollen tubes, and treatment with copper (II) chloride (CuCl2) and diphenyleneiodonium (DPI) was shown to reduce ROS in the pollen tube. Reduction in ROS content caused decreased pollen germination and pollen tube length. Furthermore, FmRbohH (respiratory burst oxidase homolog H) expression was detected in the pollen and pollen tube, and an antisense oligodeoxynucleotide assay demonstrated reduced ROS and pollen tube growth in Fraxinus mandshurica. This study shed more light on the RbohH gene functions during pollen tube growth.

In-situ ash sintering process analysis during the co-combustion of the coal gasification fine slag and corn straw

The co-combustion of coal gasification fine slag (CGFS) and biomass is proposed to enhance the poor combustion characteristic of CGFS and alleviate the ash-related issues of biomass. In this study, the sintering mechanism of CGFS ash (FA) and corn straw ash (SA) was revealed by in-situ image analysis and thermodynamic modelling. The sintering process of FA includes initial sintering stage (S1), holding stage (S2), and primary melting stage (S3). The S1 is initiated by the flow of the low-viscosity slag, whereas the subsequent S2 and S3 stages are predominantly governed by the crystallization and then the melting of anorthite with increasing temperatures, respectively. The AAEMs in SA loosens the structure of FA, thereby facilitating the onset of S1 at a low temperature. Concurrently, the anorthite is gradually converted to diopside, which possesses a lower melting point, and subsequently into sanidine, which exhibits a higher melting point. This transformation extends the temperature range across S1 and S2, leading to an initial decrease followed by an increase of ash fusion temperatures with the SA addition. The dry bottom boiler suits for the co-combustion of CGFS and corn straw and the boiler exit temperature is suggested to be higher than 968 °C.

Peanut allergen characterization and allergenicity throughout development.

Peanut allergy (PA) in children is a major concern. There is a need for better biological material for both diagnosis and oral immunotherapy (OIT) treatments. The unique state of seeds at early reproductive stages may affect the allergenicity of storage proteins, and impact clinical diagnostic and OIT protocols. The objective of this study was to evaluate the major allergen content in sequential seed developmental stages and monitor allergenicity via specific IgE binding quantification and skin prick testing. Seeds were collected from peanut plants and sorted into five developmental stages: initial (S1), developing (S2), full-size without coloration (S3), full-size with coloration (S4), and fully mature (S5) seeds. Samples were characterized by RNA-Seq, ELISA, and immunohistochemistry. Lyophilized, ground preparations were used for evaluation of skin test responses in sixty challenge-proven PA children. Gene expression, protein content, and specific IgE binding of allergenic proteins increased throughout seed maturation and development. An expression bias towards the less allergenic A-genome copy of the major allergen Ara h 2 was found in earlier stages, especially in stage S2. Immunohistochemical staining showed that Ara h 2 is more dispersed in the cell and less accumulated within organized bodies at stage S2 versus stage S4. Significant differences were found in mean wheal responses between the commercial peanut extract (equivalent to stage S5) and stages S1 and S2, but not with stage S4, upon skin prick testing in subjects with PA. The observed decrease in peanut-specific IgE binding of immature peanut seeds may be a result not only of decreased amounts of allergenic proteins, but also of profound changes in seed composition and conformation. This may be significant for developing a safer and more effective peanut OIT protocol.

Monitoring Fruit Growth and Development in Apricot (Prunus armeniaca L.) through Gene Expression Analysis.

The main objective of this study was to monitor apricot development and ripening through gene expression analysis of key candidate genes using the RT-qPCR technique. Eight apricot cultivars were selected to analyze phenological and genetic patterns from pre-ripening stages through to postharvest. In addition, 19 selected genes were analyzed in the contrasting cultivars 'Cebas Red' and 'Rojo Pasión' in different stages (two preharvest stages S1 and S2, one harvest stage S3, and two postharvest stages S4 and S5). This pool of genes included genes related to fruit growth and ripening, genes associated with fruit color, and genes linked to the fruit's nutraceutical aspects. Among the studied genes, Polygalacturonase (PG), Pectin methylesterase (PME), Aminocyclopropane-1-carboxylate synthase (ACS), and Myo-inositol-1-phosphate synthase (INO1) were directly related to fruit maturation and quality. Significant differential expression was observed between the cultivars, which correlated with variations in firmness, shelf life, and sensory characteristics of the apricots. 'Rojo Pasión' displayed high levels of PG, associated with rapid maturation and shorter postharvest shelf life, whereas 'Cebas Red' exhibited lower levels of this gene, resulting in greater firmness and extended shelf life. Genes CCD4, CRTZ, and ZDS, related to carotenoids, showed varied expression patterns during growth and postharvest stages, with higher levels in 'Rojo Pasión'. On the other hand, Sucrose synthase (SUSY) and Lipoxygenase (LOX2) were prominent during the postharvest and growth stages, respectively. Additionally, GDP-L-galactose phosphorylase (VTC2_5) was linked to better postharvest performance. This research provides valuable insights for future breeding initiatives aimed at enhancing the quality and sustainability of apricot cultivation.

Widely targeted metabolomics reveals the phytoconstituent changes in Platostoma palustre leaves and stems at different growth stages.

Platostoma palustre (Blume) A. J. Paton is an important edible and medicinal plant. To gain a comprehensive and clear understanding of the variation patterns of metabolites in P. palustre, we employed the UPLC-MS platform along with widely targeted metabolomics techniques to analyze the metabolites in the stems and leaves of P. palustre at different stages. Our results revealed a total of 1228 detected metabolites, including 241 phenolic acids, 203 flavonoids, 152 lipids, 128 terpenes, 106 amino acids, 79 organic acids, 74 saccharides, 66 alkaloids, 44 lignans, etc. As the growth time increased, the differential metabolites (DAMs) mainly enriched in P. palustre leaves were terpenoids, phenolic acids, and lipids, while the DAMs primarily enriched in stems were terpenoids. Compared to stems, there were more differential flavonoids in leaves, and saccharides and flavonoids were significantly enriched in leaves during the S1 and S2 stages. Additionally, we identified 13, 10, and 23 potential markers in leaf, stem, and leaf vs. stem comparison groups. KEGG enrichment analysis revealed that arginine biosynthesis was the common differential metabolic pathway in different growth stages and tissues. Overall, this study comprehensively analyzed the metabolic profile information of P. palustre, serving as a solid foundation for its further development and utilization.

Characterization of tadpole shrimp, Triops longicaudatus (Notostraca: Triopsidae), injury to rice and its effect on rice seedling establishment.

Rice seedlings of different stages of development were infested with tadpole shrimp (TPS, Triops longicaudatus [LeConte]), of different sizes in four experiments conducted in a lath house in Colusa, CA, during 2015 and 2016. Tadpole shrimp size was based on carapace length. Rice seedling stages were classified as S0 if no structures were present; S1 if only the coleoptile was present; S2 if the coleoptile and radicle were present; S3-I if the prophyll had emerged; S3-II if the first true leave had emerged but was not unfurled; and V1 if the first true leave was unfurled. Results showed that TPS of all sizes are capable of injuring rice and reducing seedling establishment, with larger TPS causing more seedling establishment reduction than medium or small TPS. The coleoptile, radicle, and roots were the structures most injured by TPS. During the S0 stage, TPS buried seeds, preventing their establishment. Seedling stages S1, S2, and S3-I were found to have the highest risk of injury by TPS, while seedling stage V1 had the lowest. Pearson's correlation between injured seedlings and the normalized number of established seedlings indicates that injury to the coleoptile, root, and radicle combined are the most important in preventing seedling establishment.

Step 2 for the treatment of periodontal diseases

This article discusses the modalities of treatment involved in step 2 of periodontal therapy, including exploring looking at the evidence-based recommendations produced by the S3 stages I–III periodontal treatment guideline. CPD/Clinical Relevance: Step 2 of periodontal therapy is essential for removal of the subgingival biofilm and reduction in the bacterial load.

Symptomatic and aggressive vertebral hemangiomas in children: features of modern interpretation and treatment tactics

Objective. To analyze the features of clinical-radiological manifestations of symptomatic vertebral hemangiomas in children and the possibility of algorithmizing their treatment.Material and Methods. As part of a monocenter cohort, 24 children aged 4 to 17 years received treatment for symptomatic vertebral hemangiomas. The clinical-radiological manifestations of the tumor and the effectiveness of various methods of invasive treatment were evaluated.Results. Symptomatic uncomplicated and complicated vertebral hemangiomas, corresponding to stages S2 and S3 of the Enneking classification for benign tumors, occur in children with almost equal frequency. For tumors without extravertebral spread, a closed percutaneous vertebroplasty provides stable relief of complaints. For aggressive hemangiomas with extravertebral, including epidural, spread, various treatment methods are used. An algorithm for choosing therapeutic tactics is proposed.Conclusion. Surgical treatment of symptomatic vertebral hemangiomas should be carried out using a tactical algorithm that takes into account the stage of the tumor (S2 or S3) and the possibility of performing closed or open vertebroplasty, selective arterial embolization and decompression and stabilization operations on the spine.

Full-Length Transcriptome Sequencing and Comparative Transcriptomic Analyses Provide Comprehensive Insight into Molecular Mechanisms of Flavonoid Metabolites Biosynthesis in Styphnolobium japonicum.

Styphnolobium japonicum L. is a commonly consumed plant in China, known for its medicinal and nutritional benefits. This study focuses on the medicinal properties influenced by flavonoid metabolites, which vary during flower development. Utilizing full-length transcriptome sequencing on S. japonicum flowers, we observed changes in gene expression levels as the flowers progressed through growth stages. During stages S1 and S2, key genes related to flavonoid synthesis (PAL, 4CL, CHS, F3H, etc.) exhibited heightened expression. A weighted gene co-expression network analysis (WGCNA) identified regulatory genes (MYB, bHLH, WRKY) potentially involved in the regulatory network with flavonoid biosynthesis-related genes. Our findings propose a regulatory mechanism for flavonoid synthesis in S. japonicum flowers, elucidating the genetic underpinnings of this process. The identified candidate genes present opportunities for genetic enhancements in S. japonicum, offering insights into potential applications for improving its medicinal attributes.

Transcriptome and volatile compounds analyses of floral development provide insight into floral scent formation in Paeonia lactiflora 'Wu Hua Long Yu'.

Herbaceous peony (Paeonia lactiflora) is a well-known ornamental plant in China, celebrated for its beautiful flowers that can emit fragrances. However, exact molecular mechanisms governing synthesis of floral volatiles within herbaceous peony remain unclear. To address this gap in knowledge, our study focused on analyzing the transcriptome and the levels of floral volatile compounds in P. lactiflora 'Wu Hua Long Yu' at different stages of flower development. Using gas chromatography-mass spectrometry (GC-MS), we obtained eighteen major volatile compounds, with monoterpenes being the dominant components among them. Our transcriptome analysis, based on pooled sequencing data, revealed the most differentially expressed genes (DEGs) existed between stages S1 and S3 of flower development. Among these DEGs, we identified 89 functional genes associated with the synthesis of volatile monoterpenes, with 28 of these genes showing a positive correlation with the release of monoterpenes. Specifically, key regulators of monoterpene synthesis in herbaceous peony appear to be 1-deoxy-D-xylulose 5-phosphate synthase (DXS), geranyl pyrophosphate synthase (GPPS), and terpene synthase (TPS). Additionally, our study identified some transcription factors (TFs) that may be involved in the biosynthesis of monoterpenes. These discoveries offer invaluable illumination into the intricate molecular underpinnings orchestrating the generation of floral fragrances in herbaceous peonies, and they offer a foundation for further research to identify and utilize candidate gene resources for this purpose.

Comprehensive analysis of quality and bioactive compounds in umbu-cajá fruit during different ripening stages

Umbu-cajá (Spondias tuberosa x S. mombin) is a tropical fruit with potential health benefits due to its bioactive compounds. The objective of this study was to identify the optimal harvest point for enhanced nutritional value and consumer appeal of umbu-cajá. Umbu-cajá fruit was collected at five ripening stages (S1 to S5). Immature fruit (S1) had a higher pulp yield but a lower seed yield, suggesting an inverse relationship between these fruit components. Stage 3 (S3) was identified as the optimal harvest time, as it maintained stable pulp and seed mass, corresponding to the ideal physiological maturity point for human consumption. The respiration rate increased significantly at stages S4 and S5, indicating that Spondias sp. could be classified as a climacteric fruit. Color analysis revealed increased yellowness during ripening, which is indicative of the development of desirable attributes such as sweetness and soft texture in hipened fruits. Compositional analysis demonstrated that moisture content decreased while ash and solids content increased during ripening, reflecting appropriate maturity for human consumption. The ratio of soluble solids to acidity increased, suggesting enhanced sweetness as the fruits ripened. The levels of antioxidants, except for anthocyanins, decreased during ripening, with the latter increasing up to stage S3, thereby providing the fruit with its vibrant colors. The compositional changes underscore the importance of considering both nutritional and sensory attributes in determining the optimal harvest time. Moreover, the increased antioxidant content at early ripening stages signifies the fruit's potential as a valuable source of health-promoting compounds. This study contributes to optimizing the quality of umbu-cajá and offers valuable information for sustainable production and improved consumption of these fruits. By identifying the ideal harvest time and evaluating the changes in bioactive compounds and quality attributes during ripening, this research aids in promoting healthier dietary choices and supporting the fruit industry. The findings have implications for producers, retailers, and consumers, providing a scientific basis for enhancing the nutritional value and flavor profile of umbu-cajá at the optimal stage of ripening.

Integrated analysis of HSP20 genes in the developing flesh of peach: identification, expression profiling, and subcellular localization

BackgroundPlant HSP20s are not only synthesized in response to heat stress but are also involved in plant biotic and abiotic stress resistance, normal metabolism, development, differentiation, survival, ripening, and death. Thus, HSP20 family genes play very important and diverse roles in plants. To our knowledge, HSP20 family genes in peach have not yet been characterized in detail, and little is known about their possible function in the development of red flesh in peach.ResultsIn total, 44 PpHSP20 members were identified in the peach genome in this study. Forty-four PpHSP20s were classified into 10 subfamilies, CI, CII, CIII, CV, CVI, CVII, MII, CP, ER, and Po, containing 18, 2, 2, 10, 5, 1, 1, 2, 1, and 2 proteins, respectively. Among the 44 PpHSP20 genes, 6, 4, 4, 3, 7, 11, 5, and 4 PpHSP20 genes were located on chromosomes 1 to 8, respectively. In particular, approximately 15 PpHSP20 genes were located at both termini or one terminus of each chromosome. A total of 15 tandem PpHSP20 genes were found in the peach genome, which belonged to five tandemly duplicated groups. Overall, among the three cultivars, the number of PpHSP20 genes with higher expression levels in red flesh was greater than that in yellow or white flesh. The expression profiling for most of the PpHSP20 genes in the red-fleshed ‘BJ’ was higher overall at the S3 stage than at the S2, S4-1, and S4-2 stages, with the S3 stage being a very important period of transformation from a white color to the gradual anthocyanin accumulation in the flesh of this cultivar. The subcellular localizations of 16 out of 19 selected PpHSP20 proteins were in accordance with the corresponding subfamily classification and naming. Additionally, to our knowledge, Prupe.3G034800.1 is the first HSP20 found in plants that has the dual targets of both the endoplasmic reticulum and nucleus.ConclusionsThis study provides a comprehensive understanding of PpHSP20s, lays a foundation for future analyses of the unknown function of PpHSP20 family genes in red-fleshed peach fruit and advances our understanding of plant HSP20 genes.

Genome-wide identification of STATs and analysis of their role in sex determination in Pacific oysters (Crassostrea gigas)

STAT (signal transducer and activator of the transcription) proteins, are a group of highly conserved transcription factors and fundamental components of the JAK-STAT signaling pathway. They play crucial roles in a variety of biological processes, such as immunity, proliferation, differentiation, and growth. However, little information is known regarding their role in gonad development and sex determination in mollusks. In this study, we identified 3 STAT genes in Pacific Oyster Crassostrea gigas. Phylogenetic analysis showed that STATs from mollusks were highly conserved, and most of them had four identical motif regions, except for the STAT1 and STAT3 predicted sequences from Crassostrea hongkongensis. Tissue expression analysis indicated CgSTAT1 had a high expression level in most tissues, while CgSTAT3 had a low expression level in most tissues. Expression analysis of early developmental stages showed CgSTAT1 had a higher expression level from egg to D shaped larva and a lower expression level in subsequent stages. In contrast CgSTAT1, CgSTAT2 had a reverse expression pattern. Expression analysis of different developmental stages of diploid gonads indicated that CgSTAT1 had a higher expression level at the S1 and S3 stages relative to the S2 stage in females, while in males the S3 stage had a higher expression than than the S2 stage. The expression level of CgSTAT1 between diploids and triploids in females differed significantly, but there were no significant differences in males. Expression of CgSTAT2 differed significantly between diploid and triploid males. These data suggest an important role for STATs in sex differentiation in diploid and triploid oysters. Our study is the first to explore the role of STATs in sex differentiation and gonadal development in oysters, and will help us better understand the molecular mechanisms of sex differentiation in shellfish.

Evolutionary model and palaeoenvironmental interpretation of the La Codera archaeological complex (Ebro Basin, NE Spain)

La Codera archaeological site is one of the most important settlements from the 1st Iron Age in the Ebro valley, dated between ca. 800 795 and ca. 460 cal. BC. The archaeological area also includes other later settlements. We analyzed the geomorphological context of the area by conducting a geoarchaeological survey and sampling. We also completed the evolutionary framework of the settlement, including paleoenvironmental information. Four slope stages (S1–S4) were identified, some of them related to fluvial terraces. Stages S4 and S3 are two old residual slopes dated to the Pleistocene, without evidence of human occupation. Older features related to human occupations are charcoals dated to Chalcolithic times from T2 terraces of La Codera stream. Slope S2 contains archaeological remains from the 1st Iron and Bronze Ages. Therefore, La Codera and its slopes were occupied during the Bronze Age, before Iron Age settlements. Slope S2 formation corresponds to the stable environmental stage known as the Iron Age Cold Epoch, or 2.8 Bond Event, also identified in many areas of the Ebro Depression. This period was followed by an erosive stage after the Roman Epoch (possibly during the 1.4 Bond Event). Later, a new slope (S1) formed, together with a new terrace (T1). This slope includes walls and ceramics from Iberian, Roman, and Medieval times toward the northeast of the settlement. These features make it possible to infer that this last accumulation formed during the cold stages of the LIA.

Source and genesis of Chapai carbonate-hosted Zn-Pb deposit, South China: Constraints from in-situ S and Pb isotopes of sulfide and sulfate minerals

Chapai deposit is a special medium-sized carbonate-hosted Zn-Pb deposit (4.27Mt of sulfide ore with 8.15 % Zn, 3.44 % Pb, and 53.39 g/t Ag, as well as 0.82Mt of oxidized ore with 2.8 % Zn and 1.2 % Pb and 27.68 g/t Ag) with upper oxidized ore and lower sulfide ore of South China. Due to the shortage of detailed geological and geochemical constraints, the ore genesis of single stage magmatic hydrothermal mineralization or superposition of multi-stage mineralization remains unclear. Therefore, detailed geological and geochemical analyses of in-situ S isotopic compositions of sulfide and sulfate, trace elements of sphalerite, and ore Pb isotopic compositions were performed to decode the source and genesis of the Chapai deposit. Based on the investigation and microscopic observation, mineralization of the Chapai Zn–Pb deposit has obvious early hydrothermal alternation in the early hydrothermal sulfide stage (S1) and the late hydrothermal sulfide stage (S2) as well as the supergene oxidized mineralization stage (S3). The trace elements Cu, Ag, Ga, Sb, As and Ge are incorporated into S1 and S2 stages of sphalerite mainly through the following substitution mechanisms: Zn2+↔ (Fe2+, Cd2+),2Zn2+↔ (Ag+, Cu+) +(As3+, Ga3+, Sb3+), 3Zn2+↔ Ge4++2(Cu++Ag+), 4Zn2+↔(Cu++Ag+) + Sb3++Ge4++□(vacancy). In situ δ34S values of sulfides and sulfates are within a greater range (–3.0 to + 32.2 ‰), and are significantly higher in S2 compared to S1 stage, implying the mixing of two isotopically different end-members of hydrothermal fluids and wall rocks by sulfate reduction. The S isotope of sphalerite and galena crystallized in the early stage close to 0 ‰ may be controlled by magmatic-hydrothermal fluid source, while the increased S isotope in the late stage may be derived from the increased decomposition of organic matter and organic sulfate reduction (TSR). The Pb isotopic data (206Pb/204Pb = 18.355 ∼ 18.819, 207Pb/204Pb = 15.720 ∼ 15.778, and 208Pb/204Pb = 38.912 ∼ 39.222) indicate that the sources of metallogenic materials in the Chapai deposit are primarily upper crust basement rocks. The geothermometer studies of sphalerite in Chapai deposit show that it was generated from a medium–low temperature (142 ∼ 255 °C) condition. The low Zn/Cd ratios and high concentrations of Cd and Ge in sphalerite are in agreement with those of Mississippi Valley-type (MVT) deposits. Hence, the Chapai deposit was formed in a medium–low temperature magmatic- hydrothermal system and can be categorized as a MVT deposit within Nanling region (NR).

Transcriptome analysis reveals the mechanism of nitrogen fertilizers in starch synthesis and quality in waxy and non-waxy proso millet

Recent findings suggest that optimal application of nitrogen fertilizers can effectively improve the quality of proso millet (PM). Here, we aimed to investigate the pathways associated with starch synthesis and metabolism to elucidate the effect and molecular mechanisms of nitrogen fertilization in starch synthesis and properties in waxy and non-waxy PM varieties using transcriptomic techniques. Co-expression network analysis revealed that the regulation of starch synthesis and quality in PM by nitrogen fertilizer mainly occurred in the S2 and S3 stages during grain filling. Nitrogen fertilization inhibited glycolysis/gluconeogenesis and starch biosynthesis in grains, but increased starch degradation to maltose and dextrin and then to glucose. Moreover, nitrogen fertilization increased starch accumulation by upregulating the expression of SuS and malZ genes, thereby increasing the total starch content in grains. In contrast, nitrogen fertilization suppressed the expression of GBSS gene and decreased amylose content in PM grains, resulting in a relatively higher crystallinity, light transmittance, and breakdown viscosity in the two PM varieties. Overall, these results provided transcriptomics insights into the molecular mechanisms by which nitrogen fertilization regulates starch quality in PM, identified key genes that associated with the starch properties, and provided new insights into the quality cultivation of PM.

Determination of polyphenols in Chinese jujube using ultra-performance liquid chromatography–mass spectrometry

Abstract The polyphenolic composition of the same variety of winter jujube was determined using ultra-performance liquid chromatography–mass spectrometry (UPLC–MS/MS). A metabolomic approach was employed to determine polyphenols at different developmental stages (S1, S2, and S3). The total phenolic content of Chinese jujube was quantified, and the metabolites were statistically analyzed using orthogonal partial least squares discriminant analysis (OPLS-DA) for differential metabolite screening and clustering analysis of key components. The findings revealed that 128 polyphenolic components of Chinese jujube had been identified. Different developmental periods could not be clearly distinguished in principal component analysis, and there was a crossover between S2 and S3 stages. In contrast, the OPLS-DA score plot could effectively distinguish between samples of different developmental periods, and its differential metabolites could be visualized by a volcano plot based on OPLS-DA. Ten phenolic differential metabolites in different developmental periods were clustered and analyzed, among which N′-p-coumaroylguanidinium, N-p-coumaroylbutylamine, caffeoyl guanidinium, N-feruloyl guanidinium, pianoside, isorhamnetin 5-O-hexoside, isorhamnetin O-acetyl-hexoside, quercetin, and lignan O-hexosyl-O-pentoside were higher in the S1 period and chrysoeriol 6-C-hexoside was higher in the S2 and S3 periods. In this study, the differences in jujube polyphenols were elucidated, which provided scientific guidance for the application of jujube polyphenols.

Potential candidate genes and pathways related to cytoplasmic male sterility in Dianthus spiculifolius as revealed by transcriptome analysis.

We introduced the candidate gene DsHSP70 into Arabidopsis thaliana, resulting in male gametophyte sterility and abnormal degeneration of sepals and petals. Cytoplasmic male sterility (CMS) is a useful tool for hybrid production. However, the regulatory mechanism of CMS in Dianthus spiculifolius remains unclear. In this study, we investigated whether male-sterile line of D. spiculifolius has a malformed tapetum and fails to produce normal fertile pollen. RNA sequencing technology was used to compare the gene expression patterns of the D. spiculifolius male-sterile line and its male fertility maintainer line during anther development. A total of 12,365 differentially expressed genes (DEGs) were identified, among which 1765 were commonly expressed in the S1, S2 and S3 stages. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses indicated that these DEGs were mainly involved in oxidation-reduction processes, signal transduction and programmed cell death. Additionally, weighted correlation network analysis (WGCNA) showed that three modules may be related to male sterility. A putative regulatory pathway for the male sterility traits was constructed based on the reproductive development network. After introducing the candidate DsHSP70 gene into Arabidopsis thaliana, we found that overexpressing plants showed anther abortion and shorter filaments, and accompanied by abnormal degeneration of sepals and petals. In summary, our results identified potential candidate genes and pathways related to CMS in D. spiculifolius, providing new insights for further research on the mechanism of male sterility.

Boron stimulates fruit formation and reprograms developmental metabolism in sweet cherry.

Boron modulates a wide range of plant developmental processes; however, the regulation of early fruit development by boron remains poorly defined. We report here the physiological, anatomical, metabolic, and transcriptomic impact of pre-flowering boron supply on the sweet cherry fruit set and development (S1-S5 stages). Our findings revealed that endogenous boron content increased in early growth stages (S1 and S2 stages) following pre-flowering boron exogenous application. Boron treatment resulted in increased fruit set (S1 and S2 stages) and mesocarp cell enlargement (S2 stage). Various sugars (e.g., fructose, glucose), alcohols (e.g., myo-inositol, maltitol), organic acids (e.g., malic acid, citric acid), amino acids (e.g., valine, serine) accumulated in response to boron application during the various developmental stages (S1-S5 stages). Transcriptomic analysis at early growth (S1 and S2 stages) identified boron-responsive genes that are mainly related to secondary metabolism, amino acid metabolism, calcium-binding, ribosome biogenesis, sugar homeostasis and especially to photosynthesis. We found various boron-induced/repressed genes, including those specifically involved in growth. Several heat shock proteins displayed distinct patterns during the initial growth in boron-exposed fruit. Gene analysis also discovered several putative candidate genes like PavPIP5K9, PavWAT1, PavMIOX, PavCAD1, PavPAL1 and PavSNRK2.7, which could facilitate the investigation of the molecular rationale underlying boron function in early fruit growth. Substantial changes in the expression of numerous transcription factors, including PavbHLH25, PavATHB.12L and PavZAT10.1,.2 were noticed in fruits exposed to boron. The current study provides a baseline of information for understanding the metabolic processes regulated by boron during sweet cherry fruit early growth and fruit development in general.

Rice yield penalty and quality deterioration is associated with failure of nitrogen uptake from regreening to panicle initiation stage under salinity.

In recent years, the development and utilization of saline land for rice cultivation have effectively expanded grain productivity. Rice is a salt-sensitive crop, and the increasing salinity problem threatens rice yield and quality. Therefore, we conducted open field experiments to study the effect of salinity on different growth stages of rice. Irrigating saline treatment was conducted at three different growth stages: irrigating saline from the regreening stage to the panicle initiation stage (S1), irrigating saline from the panicle initiation stage to the flowering stage (S2), and irrigating saline from the flowering stage to the maturity stage (S3). Each treatment period lasted for about 30 days. At the same time, irrigating saline water from the regreening stage to the maturity stage (S4) treatment was added in 2022 to explore the performance of salt stress during the whole growth period of rice. Based on the treatment of these different saline irrigation growth periods, three saline concentrations were incorporated, including salinity 0‰ (T1), 3‰ (T2), and 6‰ (T3) concentrations. No irrigating saline during the whole growth period was also used as a control (CK). The results indicated that rice grain yield and quality were most sensitive to saline treatment during S1 among the three stress periods. At the S1 stage, salinity mainly reduced the nitrogen uptake, resulting in stunted plant growth, reducing tillering, yield, and yield components, and deteriorating the rice quality. Compared to the control, IEN (grain yield over the total amount of N uptake in plants at maturity) was more sensitive at the S1 stage than S2 and S3 stages under salinity. Furthermore, the findings of our study suggest that under salinity, rice growth is not only directly affected by the higher sodium (Na+) content in plants, but the higher concentration of Na+ reduced the ability of plants to uptake nitrogen. Thus, more attention should be paid to the field management of the S1 stage, the most sensitive stage during rice cultivation in salinized areas. It is necessary to avoid salt damage to rice during this period and ensure irrigation with precious freshwater resources.