African animal trypanosomosis (nagana) is becoming prevalent beyond its traditionally defined geographical boundaries in African tsetse belts. However, knowledge of clinically important trypanosomes and infection rate in non-tsetse hematophagous flies and domestic animals are limited. This study characterized the potential mechanical vectors, their host feeding patterns, and trypanosome infection in them and domestic animals outside the tsetse belt in northern Kenya. Field-trapped flies and blood from camels, cattle, donkeys, goats, and sheep were screened for trypanosome infection by microscopy and polymerase chain reaction (PCR) of the internal transcribed spacer 1 region. Blood-fed specimens were analysed using PCR-HRM and/or sequencing of 16S rRNA gene to identify vertebrate blood-meal host sources. Hippobosca camelina, Stomoxys calcitrans, Tabanus spp., and Pangonia rueppellii were identified as potential vectors of trypanosomes outside the tsetse belt in Marsabit County. The trypanosome species, Trypanosoma vivax, T. evansi, T. brucei, and T. congolense were recovered in biting flies as well as in camels (Camelus dromedarius). The diversity of parasites in the biting flies was similar to that detected in the tsetse fly Glossina pallidipes collected from the tsetse-infested Shimba Hills, in coastal Kenya, suggesting a wide geographic distribution of the trypanosomes in Kenya. The biting flies fed on camels, cattle, goats, and sheep. Furthermore, we identified diverse clinical outcomes based on PCV (anemia), heamorrhagia) associated with infection with disparate Trypanosoma species. Thus, infection of flies and camels by diverse Trypanosoma species could contribute to the complex epidemiology of observed trypanosomosis in camels.