Plant Species Research Articles

Medicinal plants used in traditional bone setting by the Khasi tribe of Meghalaya, India

Meghalaya is one of the 8 states of Northeastern India; it is known for its scenic beauty, unique culture, vibrant traditions and rich bio-diversity. Traditional bone setting is a field of study that focuses on ancient methods of treating bone fractures and joint dislocations, often practiced by traditional healers. This ancient art of healing fractures and musculoskeletal injuries has been passed down through generations, blending indigenous knowledge with practical experience. Conservation initiatives should also encourage the local communities to ensure sustainable practices that benefit both nature and people. The purpose of this study was to identify, document and preserve knowledge about the medicinal plants used in traditional bone settings by the Khasi tribe of Meghalaya. The data for the ethnobotanical study were collected by interviewing the traditional bone setters through a pre-structured questionnaire. Through extensive field surveys and interviews with 115 traditional bone setters, a total of 85 medicinal plant species (belonging to 44 families) were recorded. The Zingiberaceae family contributed the most species with 11 species, followed by Asteraceae with 7 plant species and Urticaceae with 6 species, Acanthaceae, Fabaceae, Rubiaceae, Amaranthaceae and Plantiginaceae with 3 species each, while other species were represented by 2 and 1 species. More scientific investigation is required to validate the folk claims/medicine and further research and validation of these practices could lead to the development of alternative or complementary therapies for bone-related ailments.

The comprehensive regulatory network in seed oil biosynthesis.

Plant oils play a crucial role in human nutrition, industrial applications and biofuel production. While the enzymes involved in fatty acid (FA) biosynthesis are well-studied, the regulatory networks governing these processes remain largely unexplored. This review explores the intricate regulatory networks modulating seed oil biosynthesis, focusing on key pathways and factors. Seed oil content is determined by the efficiency of de novo FA synthesis as well as influenced by sugar transport, lipid metabolism, FA synthesis inhibitors and fine-tuning mechanisms. At the center of this regulatory network is WRINKLED1 (WRI1), which plays a conserved role in promoting seed oil content across various plant species. WRI1 interacts with multiple proteins, and its expression level is regulated by upstream regulators, including members of the LAFL network. Beyond the LAFL network, we also discuss a potential nuclear factor-Y (NF-Y) regulatory network in soybean with an emphasis on NF-YA and NF-YB and their associated proteins. This NF-Y network represents a promising avenue for future efforts aimed at enhancing oil accumulation and improving stress tolerance in soybean. Additionally, the application of omics-based approaches is of great significance. Advances in omics technologies have greatly facilitated the identification of gene resources, opening new opportunities for genetic improvement. Importantly, several transcription factors involved in oil biosynthesis also participate in stress responses, highlighting a potential link between the two processes. This comprehensive review elucidates the complex mechanisms underlying the regulation of oil biosynthesis, offering insights into potential biotechnological strategies for improving oil production and stress tolerance in oil crops.

Time-series transcriptome analysis reveals the cascade mechanism of biological processes following the perturbation of the MVA pathway in Salvia miltiorrhiza

Various biological processes are interconnected in plants. Transcription factors (TFs) often act as regulatory hubs to regulate plant growth and responses to stress by integrating various biological pathways. Despite extensive studies on TFs functions in various plant species, our understanding of the details of TFs regulation remains limited. In this study, clonal seedlings of Salvia miltiorrhiza were exposed to specific inhibitors for 12 h. Time-series transcriptome data, sampled hourly, were used to construct co-expression networks and gene regulatory networks (GRNs). Transcriptome dynamic analysis was utilized to capture the gene expression dynamics of various biological processes and decipher the potential molecular mechanisms that regulate these processes. The perturbation results showed the growth and development processes of S.miltiorrhiza were primarily affected at the early stage, whereas stress response-related biological processes were mainly influenced at the later stage. And there was a correlation between the series of key differentially expressed genes in terpenoid biosynthesis pathways and the topological distribution of these pathways. Furthermore, the GRNs based on TFs indicate that TFs play a crucial role in connecting various biological processes. In the cytoplasmic lysate gene regulatory module, SmWRKY48-SmTCP4-SmWRKY28 constituted a regulation hub regulating S.miltiorrhiza responses to perturbation of the MVA pathway. The regulation hub mediated various pathways, including pyruvate metabolism, glycolysis/gluconeogenesis, amino acid metabolism, and ubiquinone and other terpenoid-quinone biosynthesis.Our findings suggest that perturbation of a key biological pathway in S.miltiorrhiza has time-dependent effects on other biological processes. And SmWRKY48-SmTCP4-SmWRKY28 constitutes the regulatory hub in S.miltiorrhiza responses to perturbation of MVA pathway.

Complete mitochondrial genome assembly and comparative analysis of Colocasia esculenta

Colocasia esculenta ranks as the fifth most important tuber crop and is known for its high nutritional and medicinal value. However, there is no research on its mitochondrial genome, hindering in-depth exploration of its genomic resources and genetic relationships. Using second- and third-generation sequencing technologies, we assembled and annotated the mitogenome of C. esculenta. Its mitogenome mainly consists of five circular DNA molecules, with a total length of 594,811 bp and a GC content of 46.25%. A total of 55 genes, 157 simple sequence repeats, 29 tandem repeat sequences, 202 dispersed repeat sequences, and 625 RNA editing sites were detected. Most protein-coding genes use ATG as the start codon, and the third position of the codon tends to be A or T (U). GAA, AUU, and UUU are the most common codons in C. esculenta mitochondria. Finally, based on 28 representative plant species, a phylogenetic tree was constructed, revealing a close relationship between C. esculenta and Araceae. This study provides comprehensive information on C. esculenta, laying a foundation for crop genetics and molecular breeding.

Feeding ecology and diurnal activity patterns of the new populations of geladas (Theropithecus gelada) in the escarpments of eastern Tigray, northern Ethiopia

Studying the behavioral ecology of primates is essential to realize their conservation and management strategies. Geladas (Theropithecus gelada) are endemic primates of the Ethiopian highlands and the last remaining member of the genus Theropithecus. We present here the first-ever study on the behavioral ecology, of the newly discovered geladas in the eastern part of Tigray, Northern Ethiopia. We collected data from February to September 2020, which included both dry and wet seasons, and focused on activity patterns and feeding ecology of geladas. A band of 48 individuals was selected as a study group. Data was collected through the instantaneous scan sampling method from the focal band of geladas. Feeding accounted for 49.5% of the activity patterns, followed by moving (22.3%), resting (16%), social (10.4%), and other non-social activities (1.9%). Geladas in the present study consumed 25 plant species that belong to 12 families, more than 50% (14) being graminoids. Food items included graminoid parts (66.1%), forb parts (27.5%), tree/shrub leaves (2.4%), fruit/seeds (2.6%), flowers (0.9%), and the rest being unidentified (0.5%). Geladas are fed in large quantities on graminoid leaves, although they shifted to underground (corms, rhizomes, and roots) food items when leaves were desiccated, particularly during the dry season. The data on the diurnal activity patterns and feeding ecology of the gelada helps in developing conservation strategies and understanding habitat selection and its level of dietary specialization. The current study area is known as a new distribution of geladas in the Tigray region. Thus, this study provides data that would be crucial information for conservation practitioners at local and national levels to ensure the survival of the new and isolated population of Tigray geladas that are patchily distributed to a few escarpments of eastern Tigray, Ethiopia.

Antiparasitic Activities of Plants from the Traditional Senegalese Pharmacopoeia: Isolation of Antitrypanosomal and Antileishmanial ellagic acid derivatives from Terminalia avicennioides.

Parasitic diseases such as trypanosomiasis and leishmaniasis pose significant health challenges in Africa. The Senegalese Pharmacopoeia, known for its many medicinal plants with anti-infectious properties, can be a source of antiparasitic natural products. This study aimed to evaluate the in vitro antiparasitic activities of 33 methanolic extracts from 24 ethnopharmacologically selected plants against Trypanosoma brucei brucei and Leishmania mexicana mexicana, as well as their cytotoxic activities on WI-38 cells. The most promising plant species were Balanites aegyptiaca, Eucalyptus camaldulensis, Vachellia nilotica and four Combretaceae species. In a second step, antitrypanosomal and antileishmanial compounds were isolated by preparative HPLC from one of the most active plant extracts, Terminalia avicennioides leaves. Four ellagic acid derivatives were identified by NMR (1D & 2D) and HR-ESI-MS/MS as 3,4,3-tri-O-methylellagic acid (2), 3,4,5-O-trimethyl-3',4'-O,O-methylideneflavellagic acid (3), hexamethylcoruleoellagic acid (4) and pentamethylflavellagic acid (5). In addition, HR-ESI-MS/MS-based dereplication analysis was performed to putatively identify compounds in active cyclohexane and DCM sub-extracts. Pentamethylflavellagic acid (5) showed the most promising activity against T. brucei brucei (IC50 = 6.20 μM). This is the first time that these compounds have been isolated from T. avicennioides and evaluated for their antitrypanosomal and antileishmanial activities.

Bioactive Molecules, Ethnomedicinal Uses, Toxicology, and Pharmacology of Peltophorum africanum Sond (Fabaceae): Systematic Review

Plants have long been used to treat serious illnesses in both humans and animals. A significant underappreciated medicinal tree, Peltophorum africanum Sond is utilized by many different ethnic groups to cure a wide range of illnesses. A variety of electronic databases, including ScienceDirect, Scopus, Scielo, Scifinder, PubMed, Web of Science, Medline, and Google Scholar, were used to search the literature on P. africanum, using key words such as uses, survey, pharmacology, antigonococcal, toxicity, phytochemistry and others. Further data was obtained from several scholarly theses, dissertations, and books on general plant sciences, ethnomedicine, and other pertinent ethnobotanical topics. The plant species possess very important pharmacological activities in vitro, which includes antimicrobial, anti-HIV, antioxidant, anticancer, antidiabetic, and other activities. Phytochemically, the plant possesses various classes of compounds, dominated by flavonols, which may well explain its wider range of pharmacological activities. Although the plant is promising anti-HIV activity, the mode of action and safety profiles of the plant also need to be explored as its extracts exerted some degree of mutagenicity. It is also important to further explore its ethnoveterinary use against a plethora of nematodes that infects both wild and domestic animals. Given its potent pharmacological activity, the further in vivo studies need to be explored to ascertain the comprehensive toxicology of the plant species, thereby developing possible medications. The plant species may further be elevated to a potent pharmaceutical product against plethora of infections.

Biomagnetic monitoring of urban atmospheric pollution: A review of magnetic signatures from different types of plants.

Biomagnetic monitoring has rapidly emerged as a valuable tool in urban atmospheric pollution (UAP) assessment due to its high spatial resolution, complementing traditional monitoring systems. This review systematically elucidates the principles of plant dust retention and the factors influencing it, while also reviewing the advancements in global research on UAP monitoring through the magnetic properties of various plant species. We provide a comprehensive analysis of the current applications of biomagnetic monitoring in UAP and identify critical challenges, including species-specific monitoring discrepancies, complex pollution sources, and non-standardized sample preparation methods. Additionally, we propose future research directions to address these challenges and enhance the efficacy of biomagnetic monitoring in UAP.

Phylogeography and genetic diversity of Ulmus elongata (Ulmaceae), a Tertiary relict tree with extremely small populations (PSESP)

BackgroundAssessing the current status and identifying the mechanisms threatening endangered plants are significant challenges and fundamental to biodiversity conservation, particularly for protecting Tertiary relict trees and plant species with extremely small populations (PSESP). Ulmus elongata (Ulmus, Ulmaceae) with high values for the ornamental application, is a Tertiary relict tree species and one of the members from PSESP in China. Currently, the wild populations of U. elongata have been threatened by excessive deforestation and urbanization, but limited knowledges of its genetic diversity seriously hinder conservation efforts. Therefore, a further study on the genetic diversity and drivers of genetic pattern in U. elongata is crucial for preserving genetic resources and can serve as a reference for other Tertiary relict plants and PSESP under climate change.ResultsHere, a total of 12 populations from 70 individuals of U. elongata were collected covering its geographical distribution in China. Utilizing chloroplast genome datasets, we found that U. elongata exhibited remarkably low nucleotide diversity and gene flow (π = 0.00013, Nm = 0.03). Analysis of molecular variance (AMOVA) showed that genetic variation in U. elongata occurs mainly between eight clades (60.95%). The Mantel tests indicated a significant correlation between genetic differentiation and geographical distances (r = 0.3777, p < 0.05) in U. elongata populations. A notable phylogeographic structure was identified in U. elongata, comprising eight distinct haplogroups (NST = 0.917, GST = 0.876, p < 0.05), which was attributed to the global cooling in the East Asia and Quaternary climate oscillations.ConclusionsOverall, our study using Ulmus elongata as a representative supported the hypothesis that plants belonging to Tertiary relict species and PSESP simultaneously exhibits significantly lower genetic diversity compared to those are either Tertiary relict species or PSESP individually. Furthermore, the low genetic diversity and significant genetic differentiation in U. elongata populations can be primarily ascribed to a combination of factors, including habitat fragmentation resulting from human activities, populations contraction during LGM and small population sizes. This provides a crucial foundation for guiding conservation efforts and implementing management strategies for other Tertiary relict tree species and PSESP. Our findings also provide evidence for the important roles of East Asian monsoon system and climate oscillations in shaping the phylogeographic pattern in subtropical broad-leaved forests.

Snowfall Change Had Different Effects on Litter Decomposition for Two Typical Desert Species in Different Periods

In desert ecosystems, litter decomposition is the primary source of soil nutrients and is strongly affected by extreme climate events, which may influence desert plant survival and species diversity. To date, the effects of snowfall changes on litter decomposition in desert species remain poorly understood. Here, a snowfall manipulation experiment was conducted in Northwest China that included snowfall addition and removal treatments, as well as a natural snowfall control. Compared to the control, snowfall addition increased the amount of litter mass lost for Salsola passerina and Reaumuria soongarica during the snow-covered period by 21.54% and 21.8%, respectively. In contrast, snowfall addition effects differed between species during the snow-free period. More carbon was released from the S. passerina litter in the snowfall addition treatment during the snow-free period. Similarly, during the snow-covered period, more carbon and nitrogen were released from the R. soongorica litter in the snowfall addition treatment. Overall, the proportion of litter mass lost (from the annual total) increased with snowfall addition in the snow-covered period but was reduced with snowfall addition in the snow-free period. In the snow-covered period, the snowfall addition treatment affected litter mass loss to the same extent in both species but impacted S. passerina more strongly than R. soongorica in the snow-free period due to differences in soil urease activity. Changes in snowfall, therefore, significantly influenced litter decomposition in both desert species, but these effects differed between the snow-covered and snow-free period, particularly for litter with a higher C:N ratio.

Locally Specific Genome-Wide Signatures of Adaptation to Environmental Variation at High Resolution in an Alpine Plant.

Microevolutionary processes shape adaptive responses to heterogeneous environments, where these effects vary both among and within species. However, it remains largely unknown to which degree signatures of adaptation to environmental drivers can be detected based on the choice of spatial scale and genomic marker. We studied signatures of local adaptation across two levels of spatial extents, investigating complementary types of genomic variants-single-nucleotide polymorphisms (SNPs) and polymorphic transposable elements (TEs)-in populations of the alpine model plant species Arabis alpina . We coupled environmental factors, derived from remote sensed digital elevation models (DEMs) at very high resolution (0.5 m), with whole-genome sequencing data of 304 individuals across four populations. By comparing putatively adaptive loci detected between each local population versus a regional assessment including all populations simultaneously, we demonstrate that responses of A. alpina to similar amounts of abiotic variation are largely governed by local evolutionary processes. Furthermore, we find minimally overlapping signatures of local adaptation between SNPs and polymorphic TEs. Notably, functional annotations of candidate genes for adaptation revealed several symbiosis-related genes associated with the abiotic factors studied, which could represent selective pressures from biotic agents. Our results highlight the importance of considering different spatial extents and types of genomic polymorphisms when searching for signatures of adaptation to environmental variation. Such insights provide key information on microevolutionary processes and could guide management decisions to mitigate negative impacts of climate change on alpine plant populations.

Greening up the City with Native Species: Challenges and Solutions

Urban green spaces provide many benefits, including to human wellbeing, ecosystem services, and urban wildlife. Thus, there are many reasons to green up urban spaces, especially by using native species. Furthermore, urban green spaces are suited to enhancing biodiversity without negatively impacting food or fiber production. Municipalities and private landowners invest substantially in landscaping and its maintenance. However, much of that outlay supports non-native plants that may be less adapted to local conditions such as rainfall patterns and temperature ranges, thus having greater resource requirements, as well as being less supportive of native wildlife and possessing a greater potential of becoming invasive. Here, we explore ways to increase the use of native plant species in urban settings to reduce the need for watering or chemical application, enhance the support of native species, and reduce the risk of invasion to urban and ex-urban habitats. We identify three main impediments: the perception of native species as less aesthetically pleasing, the availability of native plants in the nursery industry, and the willingness of policymakers to take supportive measures. We propose methods to address all three, providing successful examples from a number of US localities and a case study that demonstrates what drivers might exist and what actions remain to be taken.

Detection of the phytoplasma associated with coconut lethal yellowing-type disease in three weed species growing in coconut farms in Ghana

The lethal yellowing-type syndrome of coconut in Ghana, locally called Cape St. Paul wilt disease (CSPWD) is considered as the foremost threat to the survival of the coconut industry in the country. The syndrome is associated with a phytoplasma belonging to the 16SrXXII-B subgroup. In Ghana, no alternative hosts of the phytoplasma have been identified. To identify alternative hosts of the phytoplasma associated with CSPWD, 21 plant species belonging to 16 plant families were sampled from within and around the vicinity of 10 CSPWD affected farms in the Western, Central and Volta Regions of Ghana. Nested PCR and sequencing using assays based on the 16SrRNA gene were used to detect the CSPWD associated phytoplasma in the plant species, Laportea aestuans, Starchtarpheta indica and Pentodon pentandrus. Removal ofthese non-coconut plant species will be incorporated into existing management strategies for CSPWD in Ghana. The plants will be further investigated for their role in the epidemiological cycle of the disease.

Sustainable remediation of abandoned coal mines using vermicompost: a case study in Ledo coal mine, India.

Coal mining in India, especially open-cast mining, substantially strengthens the economy while concurrently causing environmental deterioration, such as soil pollution with toxic chemicals and heavy metals. This study sought to examine the efficacy of vermicompost as a remediation technique for Mine Tailing Soil (MTS) in the Ledo Coal Fields. During a 120-day duration, different concentrations of vermicompost (20%, 30%, and 40%) were administered to MTS, and the impacts on soil physicochemical parameters, fertility, and plant growth were evaluated. The findings indicated substantial enhancements in soil fertility, encompassing increased nutrient availability, improved water retention, and diminished bulk density. Plant species, including Abelmoschus esculentus, Solanum lycopersicum, and Delonix regia, showed substantial growth when subjected to 20% and 30% vermicompost amendments, with the 30% treatment producing the most remarkable outcomes. Furthermore, Risk Assessment Code values for soils amended with 20%, 30%, and 40% vermicompost were markedly diminished, reducing the bioavailability and mobility of heavy metals. The data indicate that vermicompost is an efficient and sustainable method for remediating MTS, alleviating heavy metal contamination, and enhancing plant development, thus addressing the environmental hazards of coal mining.

Environmental influence and species occurrence of yellowjacket drones in an invaded area

During the mating season, reproductive individuals of numerous insect species gather in rendezvous areas, which increases mating opportunities. Male hymenopterans often have to move considerable distances during a particular season, searching or waiting for receptive females. Such behavior is likely driven by a complex combination of individual and species-specific traits, environmental influence, and landscape cues. Our field study aimed to determine factors affecting the occurrence of Vespula spp. drones, focusing on the influence of vegetation traits, atmospheric factors and diel effects, and the species occurrence proportion in an invaded area in Patagonia. Our results indicate that the probability of drone presence over different types of vegetation is affected both by plant species and height. Also, weather and time of day influence the number of individuals simultaneously gathering, as higher abundances of flying drones are found in early hours, warmer days and at low cloud cover. Lastly, through mid-flight drone captures, we determined that both V. germanica and V. vulgaris drones are found concurrently in the same rendezvous areas. This constitutes the first exploratory field study reporting the heterospecific occurrence of Vespula spp. drones and overall, our results contribute to the understanding of yellowjackets mating systems.

More than garden plants: extending the conversation of urban gardens as an important refuge for Australian birds

Abstract Inadequacies in public protected area networks dictates that private land will play an important role in the conservation of biodiversity in the coming decades. Household gardens are a key example of private lands that can serve as refuges for biodiversity, with birds as a popular flagship for garden biodiversity. Discussion has focused heavily on the species of plant a resident might select to attract birds to their garden. In this paper, we describe additional and important factors that should form part of this broader conversation on gardens for birds and biodiversity, with a specific aim of drawing attention to species that are at risk of localised extinctions in modern urban landscapes – urban adaptors. We present our commentary in two themes: (a) mitigating threats to birds in the urban environment and (b) enhancing the habitat value of the urban environment for a broader range of bird species. We provide a synthesis of the research of recent years that has explored the urban environment and its ability to support birds, but importantly, we extend on this by bringing together topics that have been somewhat lacking in the discussion to date. In a new approach to this conversation, this paper brings together key topics that can no longer be considered in isolation if we are to make significant conservation gains in the environments were most Australians now reside.

Identification of Proteoforms Related to Nelumbo nucifera Flower Petaloid Through Proteogenomic Strategy

Nelumbo nucifera is an aquatic plant with a high ornamental value due to its flower. Despite the release of several versions of the lotus genome, its annotation remains inefficient, which makes it difficult to obtain a more comprehensive knowledge when –omic studies are applied to understand the different biological processes. Focusing on the petaloid of the lotus flower, we conducted a comparative proteomic analysis among five major floral organs. The proteogenomic strategy was applied to analyze the mass spectrometry data in order to dig out novel proteoforms that are involved in the petaloids of the lotus flower. The results revealed that a total of 4863 proteins corresponding to novel genes were identified, with 227 containing single amino acid variants (SAAVs), and 72 originating from alternative splicing (AS) genes. In addition, a range of post-translational modifications (PTMs) events were also identified in lotus. Through functional annotation and homology analysis with 24 closely related plant species, we identified five candidate proteins associated with floral organ development, which were not identified by ordinary proteomic analysis. This study not only provides new insights into understanding the mechanism of petaloids in lotus but is also helpful in identifying new proteoforms to improve the annotation of the lotus genome.

Transcriptome and Neuroendocrinome Responses to Environmental Stress in the Model and Pest Insect Spodoptera frugiperda

The fall armyworm, Spodoptera frugiperda, is one of the most notorious pest insects, causing damage to more than 350 plant species, and is feared worldwide as an invasive pest species since it exhibits high adaptivity against environmental stress. Here, we therefore investigated its transcriptome responses to four different types of stresses, namely cold, heat, no water and no food. We used brain samples as our interest was in the neuroendocrine responses, while previous studies used whole bodies of larvae or moths. In general, the responses were complex and encompassed a vast array of neuropeptides (NPs) and biogenic amines (BAs). The NPs were mainly involved in ion homeostasis regulation (ITP and ITPL) and metabolic pathways (AKH, ILP), and this was accompanied by changes in BA (DA, OA) biosynthesis. Cold and no-water stress changed the NP gene expression with the same patterns of expression but clearly separated from each other, and the most divergent pattern of expression was shown after no-food stress. In conclusion, our data provide a foundation in an important model and pest insect with candidate NPs and BAs and other marker candidate genes in response to environmental stress, and also potential new targets to manage pest insects.

Characterizing the microbiome recruited by the endangered plant Firmiana danxiaensis in phosphorus-deficient acidic soil

Phosphorus (P)-deficient soils serve as crucial habitats for endangered plant species. Microbiomes play pivotal roles in soil element cycling and in determining a plant’s adaptability to the environment. However, the relationship between the endangered plant, microbiome, and soil stoichiometric traits, and how it affects plant adaption to P-deficient habitats remain largely unexplored. In this study, we investigated the microbiome (bacteria and fungi) in the rhizosphere of Firmiana danxiaensis, an endangered plant species growing exclusively in P-deficient acidic soils on Mt. Danxia, South China; the non-endangered coexisting tree species Pinus massoniana was used as a reference. Our results showed that soil traits in the rhizosphere of F. danxiaensis differed significantly from that of P. massoniana, including higher soil pH, lower C:N, and higher N:P. The rhizosphere of F. danxiaensis harbors higher microbial diversity and different microbial communities from P. massoniana. Using the machine learning approach, we characterized 76 bacterial and 20 fungal phylotypes dominated in F. danxiaensis rhizosphere, most of which had strong impacts on microbial ecological network structure (they accounted for only 0.33% node numbers but linked 21.2% of the nodes in the network); specifically, Udaeobacter spp., a highly abundant (constituting 4.07% of the total bacterial community) member of Verrucomicrobiota exclusively accumulated in the rhizosphere of F. danxiaensis but not P. massoniana, demonstrated a pronounced ecological prefers toward F. danxiaensis rhizosphere habitat (high pH, low C:N and high N:P) and potential antagonistic indication. In contrast, P. massoniana rhizosphere harbored more Subgroup2 of Acidobacteria and Gammaproteobacterial N-fixer. Taken together, this study provided novel evidence that endangered plants recruited a unique microbiome characterized by Udaeobacter spp. favoring high N habitat. It contributes not only to our understanding of microbiome recruitment by plants in P-deficient acidic soils, but also underscores the importance of microbiome in the conservation and population restoration of endangered plants.

Identifying a Biocontrol Bacterium with Disease-Prevention Potential and Employing It as a Powerful Biocontrol Agent Against Fusarium oxysporum

Biocontrol microbes are environment friendly and safe for humans and animals. To seek biocontrol microbes effective in suppressing Fusarium oxysporum is important for tomato production. F. oxysporum is a soil-borne pathogen capable of causing wilt in numerous plant species. Therefore, we found a biocontrol bacterium with an excellent control effect from the rhizosphere soil of plant roots. In this work, we focus on two parts of work. The first part is the identification and genomic analysis of the biocontrol bacterium Y-4; the second part is the control efficiency of strain Y-4 on F. oxysporum. For this study, we identified strain Y-4 as Bacillus velezensis. It is an aerobic Gram-positive bacterium that can secrete a variety of extracellular enzymes and siderophores. Strain Y-4 also contains a large number of disease-resistant genes and a gene cluster that forms antibacterial substances. In addition, we found that it significantly inhibited the reproduction of F. oxysporum in a culture dish. In the indoor control effect test, after treatment with strain Y-4 suspension, the disease index of tomato plants decreased significantly. Furthermore, the control efficiency of the plants was 71.88%. At the same time, Y-4 bacterial suspension induced an increase in POD and SOD enzyme activities in tomato leaves, resulting in increased plant resistance. Taken together, strain Y-4 proves to be an effective means of controlling F. oxysporum in tomatoes.