Low-molecular-weight organic acids (LMWOAs) play a crucial role as components of dissolved organic matter in soil, influencing the sorption/desorption, degradation, and plant uptake of diverse pollutants within the agricultural soil ecosystem. This study delves into the sorption behavior and mechanism of the fluoroquinolone antibiotic enrofloxacin (ENR) on agricultural soil in North China, focusing on the impact of LMWOAs. Through batch equilibrium experiments, we explored the sorption/desorption kinetics of ENR under varying conditions such as temperature, pH, ion strength, and ion type, with the addition of acetic acid, oxalic acid, and citric acid individually. Our findings reveal that the sorption and desorption kinetics of ENR—whether with or without LMWOAs—conformed well to the pseudo-second-order kinetic model (R2 ≥ 0.997). The presence of LMWOAs notably enhanced ENR sorption while impeding desorption in soil, with oxalic acid demonstrating the highest promotion effect followed by acetic acid and citric acid. Moreover, the sorption capacity and affinity of ENR decreased with rising solution pH, dropping from 96.8%-98.5% to 30.9%–34.4%. Acidic conditions favored ENR retention in soil, with inhibition of sorption escalating alongside increasing ionic strength. LMWOAs, soil solution pH, and coexisting ions emerge as pivotal factors shaping ENR sorption behavior. Furthermore, LMWOA presence intensified desorption hysteresis of ENR on soil, with a desorption hysteresis coefficient (HI) ≤ 0.124. These results suggest that LMWOAs restrict ENR mobility in the local soil environment, heightening the risk of its accumulation in soil and crops. This study offers valuable insights into the intricate interplay among LMWOAs, ENR sorption dynamics, and environmental outcomes, underscoring the importance of understanding such complexities in agricultural soil management.