Aqueous zinc-based batteries offer high safety, abundant resources, low cost, and environmental friendliness, making them a promising alternative to lithium-ion batteries for large-scale energy storage markets. However, the natural convection in the electrolyte during operation, which can greatly affect the battery performance, is overlooked for a long time. Through particle tracing experiments, this study demonstrates that in the vertical placement of the battery, natural convection occurs due to the variation of electrolyte density, whereas it does not happen when the cathode is on top. Besides, there is a significant difference in electrochemical performance between these two configurations, with a voltage difference of up to 0.25 V at 10 mA cm⁻² and a peak current difference of up to 3.4 mA in linear sweep voltammetry. Simulation results show that convective mass transfer can be up to 100 times greater than diffusive mass transfer in a bulk solution. This highlights the importance of considering natural convection to improve model accuracy. Further, to increase energy density, batteries are scaled up in practical applications to reduce the weight of the casing. This work simulates mass transfer conditions under various scenarios, illustrating the trade-off between current density and battery size, and offering new guidance for the design of aqueous zinc-based batteries.