AbstractMagnetic measurements going back to the eighteenth century offer a unique opportunity to study multicentennial changes in the upper atmosphere. We analyzed measurements from Rome and Mannheim from May 1782 to May 1783 and measurements from Greenwich, St. Helena, Cape of Good Hope, and Singapore from May 1841 to May 1842. A comparison of the daily magnetic variations in these historical data with modern‐day observations from 2010 at nearby stations (where available) showed notable differences in the amplitude and/or phase of the X and Y components. Model simulations indicated that these can be explained at least to some extent by changes in the Earth's main magnetic field. Changes in the main field strength and the northwestward movement of the magnetic equator, in particular in the region of the South Atlantic Anomaly, have caused changes in the positioning, shape, and strength of the equivalent current vortices in the ionosphere that result in the magnetic perturbations on the ground. Differences in solar activity between the historical and modern epochs, which were all near solar minima, were too small to have a notable effect on the ground magnetic perturbations. However, in regions where main magnetic field changes have been relatively small for the last ~400 years, e.g., in Singapore, the effects of a long‐term increase in solar activity from Maunder Minimum conditions to normal solar minimum conditions (an increase in F10.7 of ~35 solar flux units) were comparable to the effects of geomagnetic main field changes.