Soil Geochemical Properties Research Articles

Climate and Soil Geochemistry Influence the Soil Organic Carbon Content in Drylands of the Songliao Plain, Northeast China

AbstractThe understanding of the spatial distribution of soil organic carbon (SOC) and its influencing factors is crucial for comprehending the global carbon cycle. However, the impact of soil geochemical and climatic conditions on SOC remains limited, particularly in dryland farming areas. In this study, we aimed to enhance the understanding of the factors influencing the distribution of SOC in the drylands of the Songliao Plain, Northeast China. A dataset comprising 35,188 measured soil samples was used to map the SOC distribution in the region. Multiple linear regression (MLR) and random forest models (RFM) were employed to assess the importance of driving indicators for SOC. We also carried out partial correlation and path analyses to further investigate the relationship between climate and geochemistry. The SOC content in dryland soils of the Songliao Plain ranged from 0.05% to 11.63%, with a mean value of 1.47% ± 0.90%. There was a notable increasing trend in SOC content from the southwest to the northeast regions. The results of MLR and RFM revealed that temperature was the most critical factor, demonstrating a significant negative correlation with SOC content. Additionally, iron oxide was the most important soil geochemical indicator affecting SOC variability. Our research further suggested that climate may exert an indirect influence on SOC concentrations through its effect on geochemical properties of soil. These insights highlight the importance of considering both the direct and indirect impact of climate in predicting the SOC under future climate change.

The effect of biosecurity heat treatment on soils: implications for soil analytical methods and mineral exploration

Soils are widely used as geochemical sample media. A recent advancement in soil analytical methods for exploration developed in Australia, the UltraFine+ ® method, concentrates the clay-sized fraction of <2 µm and then analyses this fraction for over 50 elemental concentrations, pH, electrical conductivity and spectral mineralogy/properties (i.e., visible –near- to shortwave and mid- infrared reflectance spectroscopy). This new approach was initially limited to Australian soils due to strict biosecurity legislation. However, since 2022 samples can be shipped to Australia and heat-treated to 160 °C to be released from quarantine-approved premises prior to analysis. A study was undertaken to determine the influence of the temperature heat treatment on the spectral and geochemical properties of soils. One hundred and three soils were collected from multiple regions of Australia to provide a background set of samples to test the effect of heat treatment on the analytical response using the clay-sized fraction analytical method. These soils comprised multiple clay types and are representative of general soil types and target commodities in mineral exploration settings. Results show that heat treatment did not significantly impact elemental abundance of common pathfinder and target elements in minerals exploration with strong correlation and linear trends between the treatments. Spectral parameters measured in the visible to mid infrared range were also unaffected by heating. Some observed elemental changes were related to inconsistent extraction of resistate elements (Hf, Nb, Zr). Counter to other studies, a pH decrease was observed in heat-treated samples. The study concludes that biosecurity release heat treatment at 160 °C does not hinder analysis of the ultrafine fraction soils with a concentrated aqua regia assay and spectral mineralogy measurements.

Worldwide Examination of Magnetic Responses to Heavy Metal Pollution in Agricultural Soils

Over the last decade, a large number of studies have been conducted on heavy metals and magnetic susceptibility (χlf) measurement in soils. Yet, a global understanding of soil contamination and magnetic responses remains elusive due to the limited scope or sampling sites of these studies. Hence, we attempted to explore a pollution proxy on a global scale. Through a meta-analysis of data from 102 published studies, our research aimed to provide a worldwide overview of heavy metal pollution and magnetic responses in agriculture soils. We mapped the geographic distribution of nine heavy metals (Cr, Cu, Zn, Pb, Ni, As, Cd, Mn, and Fe) in agricultural soils and explored their pollution sources and contributions. Since 2011, The accumulation of heavy metals has escalated, with industrial activities (31.5%) being the largest contributor, followed by agricultural inputs (27.1%), atmospheric deposition (22.66%), and natural sources (18.74%). The study reports χlf ranging from 6.45 × 10−8 m3/kg to 319.23 × 10−8 m3/kg and χfd from 0.59% and 12.85%, with the majority of the samples being below 6%, indicating heavy metal influence mainly from human activities. Pearson’s correlation and redundancy analysis show significant positive correlations of Pb, Zn, and Cu with χlf (r = 0.51–0.53) and Mn and Fe with χfd (r = 0.50–0.53), while Pb, Zn, Cu, and As metals were shown to be key factors of variation in magnetic response. The average heavy metal pollution load index of 2.03 suggests moderate global agricultural soil pollution, with higher heavy metal contamination in areas of high χlf. Regression analysis confirms soil is considered to be non-polluted below χlf of 26×10−8 m3/kg and polluted above this threshold, with all contamination factors of metals showing a linear correlation with χlf (R = 0.72), indicating that a significant relationship between χlf and the geochemical properties of soils continues to exist on a global scale. This study provides new insights for large-scale agricultural soil quality assessment and magnetic response.

Variation of Geochemical Properties of Soils in Tropical Lowland Rainforests in Sri Lanka

Tropical lowland rainforests (TLRFs) of Sri Lanka are considered as diverse ecosystems which play a vital role in climate change mitigation. In recent years, increasing deforestation leads to diminishing their potential ecosystem roles. For efficient forest conservation, knowledge of both above- and below-ground characteristics of TLRFs is required. Currently, above-ground information on TLRFs is sufficiently available but the details on the below-ground characteristics are limited. Therefore, this study was carried out to investigate pedo-geochemical properties of lowland rain forests of Kanneliya (KDN) and Pitadeniya, (PTD) in Sri Lanka. Four sampling plots with 1 ha in size (KDN1, KDN2, PTD1 and PTD2) were established, selecting altitudes of 117, 174, 509, and 618 m asl, respectively. Five representative near-surface (up to 25 cm) samples were collected from each plot for the investigation. Soil pH, electrical conductivity (EC), and cation exchange capacity (CEC) were measured while soil organic matter (SOM) content was determined by (i) Walkey-Black (WB) and (ii) Loss on ignition (LI) methods. Data were analysed by ANOVA and means were compared using Duncan‘s test. All measured parameters were significantly different (P<0.05) among the sampling plots. Soil pH and EC values were ranged between 3.43– 3.78 and 0.28–0.44 dS m-1, respectively. The highest CEC was recorded in PTD2 (11.09±3.44 cmol(+)/kg) whereas the lowest was in PTD1 (5.31±1.26 cmol(+)/kg). The highest SOM was recorded in PTD1 (17.71±4.42% in WB, 18.04±3.98% in LI) whereas the lowest was noted in PTD2 (5.81±3.07% in WB, 8.21±2.13% in LI). According to the comparison made between WB and LI methods, LI method recorded higher SOM content. The actual SOM and volatilizable water in hygroscopic mineral fractions might be the reason for the higher values in LI method. All acquired data were compared with standard interpretation data and accordingly, soils of the measured TLRFs are acidic, non-saline and non-reduced with sufficient soil aeration. Even though, TLRF vegetation produce high amount of biomass, soil CEC and SOM contents are low in the study area due to rapid microbial decomposition and absorption of dense vegetation. There was no linear relationship between measured parameters and altitude. Overall, measured soil chemical properties can be considered as ideal indicators of TLRFs conservation and therefore, it needs to be correlated with above-ground properties for understanding the behaviour of TLRFs responding to conservation strategies. 
 Keywords: Forest conservation, Soil chemical properties, Soil organic matter content, Tropical lowland rainforest

PFOA and PFOS induces mineralization of soil organic carbon by accelerating the consumption of dissolved organic carbon

The wide spread of Perfluoroalkyl substances (e.g., PFOA and PFOS) in soil can alter native soil geochemical properties and microbial communities through various approaches. Nonetheless, it is unclear that how PFOA and PFOS in soil affect the mineralization of soil organic carbon (SOC). A laboratory-scale culture experiment (180 d) was performed to explore the contribution of PFOA and PFOS to SOC dynamics and soil geochemical processes. Results showed that positive priming effect (PE) occurred in the short term (i.e., 30 days after PFOA and PFOS addition) and subsequently shifted to a slightly negative PE (i.e., 90 days) and remained in a significant negative PE thereafter (i.e., > 180 days). The PEs caused by PFOA and PFOS both accelerated the consumption of dissolved organic carbon (DOC), resulting in a significant increase in SOC mineralization (10.45%–127.36%) under the short-term incubation (30 d). As for long-term exposure (> 90 d), the organic carbon mineralization rate was significantly reduced (58.30%–65.24%) due to the excessive DOC consumption in the initial stage. High throughput analysis indicated that both PFOA and PFOS changed soil bacterial and fungal community structures, altered the relevant metabolic pathways and resulted in the enrichment of specific taxa.Graphical

Discrepant responses of bacterial community and enzyme activities to conventional and biodegradable microplastics in paddy soil

The prevalence of microplastics in soil ecosystems has raised concerns about their potential effects on soil properties. As promising alternatives to conventional plastics, biodegradable plastics have been increasingly applied in agricultural activities, which may release microplastics into the soil due to incomplete degradation. Compared to conventional microplastics, biodegradable microplastics in soil may induce different impacts on soil microbial properties, which have yet to be well studied. Through a 41-day microcosm experiment, we evaluated the differential effects of conventional (polypropylene, PP) and biodegradable (polylactic acid, PLA) microplastics on the geochemical properties, enzyme activities, and microbial community structure in paddy soil. Adding PLA or PP microplastics into soil significantly increased pH values and altered the contents of carbon and nitrogen nutrients. Exposure to microplastics significantly increased the activity of fluorescein diacetate hydrolase, but had varying effects on the activities of urease, sucrase, and alkaline phosphatase depending on microplastic types and doses. The addition of microplastics also influenced the structure of soil bacterial community, with Proteobacteria, Actinobacteriota, and Acidobacteriota being the dominant phyla. Significant differences in the genera of Pseudarthrobacter, Acidothermus, Bacillus, Aquisphaera, and Massilia were observed between treatments. Results of structural equation modeling (SEM) demonstrated that changes in soil carbon and nitrogen nutrients and pH values positively affected the bacterial community, while soil bacterial community as a whole exerted a negative impact on enzyme activities. FAPRPTAX analysis showed that the addition of microplastics altered the relative abundances of functional genes related to the metabolism of cellulose decomposition and ureolysis in paddy soil. Findings of this study clearly suggest that microplastic impacts on soil geochemical and microbial properties should be an integral part of future risk assessment and that to evaluate microplastic impacts, both the concentration and polymer type must be taken into account.

Management of a contaminated mine soil: Effect of soil water content on antimony and arsenic immobilisation by iron‐based amendments and biochar composites

AbstractAlteration of wet and dry periods affects soil geochemical properties that drive contaminant availability and mobility. Consequently, the efficiency of soil remediation may vary, and thus soil management needs to consider these variations. This study reveals the effect of soil moisture manipulation on the behaviour of the toxic metalloids antimony (Sb) and arsenic (As) and the immobilisation efficiency of nanoscale zero‐valent iron (nZVI), biochar (BC) and BC modified by iron or iron/ferrous sulphide (nZVI‐BC and Fe/FeS‐BC). Soil samples from an abandoned Sb mining site were tested under laboratory conditions. Two distinct (organic and mineral) soil layers were incubated with each of the amendments (2% w/w application rate) at 50% and 100% water holding capacity (WHC) of the soils for 10 weeks, and subsequently extracted with demineralised water and rainwater. The immobilisation efficiency of the tested amendments was significantly influenced by the different soil moisture regimes and type of contaminant. Sorption onto secondary Fe minerals was the dominant Sb/As immobilizing mechanism. The iron‐based amendments showed up to 97% efficiency for Sb and up to 96% for As. However, Sb/As release was generally higher at 100% WHC and in the rainwater extracts compared to the other conditions, indicating that heavy rainfall and flooding of soils in‐situ may increase contaminant availability and mobility. In the organic layer, enhanced formation and leaching of metalloid‐DOC complexes and sorption competition of the negatively charged Sb/As species and DOC can be expected. Also, reductive dissolution of Sb or As‐bearing metal oxides could lead to the observed higher Sb/As release under flooded conditions, resulting in exacerbated environmental and health risks. Therefore, it is crucial to (1) improve the sorption characteristics of the tested amendments and/or develop other effective amendments for Sb/As immobilisation in different water regimes in soil; (2) test the amendments under real field conditions to evaluate the long term wet/dry exposure; and (3) develop proper risk assessment and soil remediation strategy for the study area and similar sites.

Unraveling the sedimentation environment of Marajó island: Insights from geochemical studies and implications for the origin of potentially toxic element in soils

Marajó Island, located at the mouth of the Amazon and Tocantins rivers, is the largest fluvial maritime island on Earth. Its unique location within the Amazon biome and its complex sedimentary dynamics makes it a region of great ecological and socio-economic importance. However, the island is facing significant challenges due to climate change, with projections suggesting permanent flooding of its floodplains in the coming decades. Despite numerous studies on soil geochemistry in the Amazon biome, there is a lack of research specifically focused on Marajó Island. Our study aims to investigate the soil's geochemical properties on the major parent materials in the eastern portion of Marajó Island, seeking to unravel the nature of its complex sedimentary environment, elemental relationships, origin and implications of potentially toxic elements. Samples from seven soil profiles representative of the eastern portion island were collected in a chronosequence, to conduct physical and chemical analyzes: selective dissolution of Fe oxides by sodium citrate-bicarbonate-dithionite and ammonium acid oxalate; quantification of major, trace and rare earth elements (REE) performed by multi-acid digestion and determination in ICP-OES/MS; characterization of weathering intensity by the chemical index of alteration (CIA), chemical weathering index (CWI), plagioclase index of alteration (PIA), chemical proxy of alteration (CPA), and index of compositional variability (ICV); and assessment of potentially toxic elements using enrichment factor and geoaccumulation index. The results indicated that the geochemical variation of soils reflected particularities of the parent material influenced by marine transgression events, and by the current conditions of water table oscillation and humid tropical climate. Holocene Sediments (HS) revealed enrichment by light REE. In soils on Post-Barreiras (PB), Laterite Formation (LF) and Lateritic Debris (LD), the main elements were Al, Fe, and Ti. Due to intense weathering and leaching, negative anomalies were observed in nearly all elements, including the REE. Arsenic enrichment in HS soils was due to the past estuarine influence and the current hydromorphic conditions, while soils on PB, LF and LD are naturally enriched by the parent material.

Exogenous Electroactive Microbes Regulate Soil Geochemical Properties and Microbial Communities by Enhancing the Reduction and Transformation of Fe(III) Minerals.

Electroactive microbes can conduct extracellular electron transfer and have the potential to be applied as a bioresource to regulate soil geochemical properties and microbial communities. In this study, we incubated Fe-limited and Fe-enriched farmland soil together with electroactive microbes for 30 days; both soils were incubated with electroactive microbes and a common iron mineral, ferrihydrite. Our results indicated that the exogenous electroactive microbes decreased soil pH, total organic carbon (TOC), and total nitrogen (TN) but increased soil conductivity and promoted Fe(III) reduction. The addition of electroactive microbes also changed the soil microbial community from Firmicutes-dominated to Proteobacteria-dominated. Moreover, the total number of detected microbial species in the soil decreased from over 700 to less than 500. Importantly, the coexistence of N-transforming bacteria, Fe(III)-reducing bacteria and methanogens was also observed with the addition of electroactive microbes in Fe-rich soil, indicating the accelerated interspecies electron transfer of functional microflora.

Environmental contamination levels based on geochemical properties of soils from direct influence areas of hydroelectric power plants

Environmental contamination levels based on geochemical properties of soils from direct influence areas of hydroelectric power plants

Decrease in Soil Functionalities and Herbs’ Diversity, but Not That of Arbuscular Mycorrhizal Fungi, Linked to Short Fire Interval in Semi-Arid Oak Forest Ecosystem, West Iran

The semi-arid forest ecosystems of western Iran dominated by Quercus brantii are often disturbed by wildfires. Here, we assessed the effects of short fire intervals on the soil properties and community diversity of herbaceous plants and arbuscular mycorrhizal fungi (AMF), as well as the interactions between these ecosystem features. Plots burned once or twice within 10 years were compared to unburned plots over a long time period (control sites). Soil physical properties were not affected by the short fire interval, except bulk density, which increased. Soil geochemical and biological properties were affected by the fires. Soil organic matter and nitrogen concentrations were depleted by two fires. Short intervals impaired microbial respiration, microbial biomass carbon, substrate-induced respiration, and urease enzyme activity. The successive fires affected the AMF's Shannon diversity. The diversity of the herb community increased after one fire and dropped after two, indicating that the whole community structure was altered. Two fires had greater direct than indirect effects on plant and fungal diversity, as well as soil properties. Short-interval fires depleted soil functional properties and reduced herb diversity. With short-interval fires probably fostered by anthropogenic climate change, the functionalities of this semi-arid oak forest could collapse, necessitating fire mitigation.

Lateral and Radial Differentiation of Cryogenic Soils Chemical Composition in the Vilyuy River valley, Central Yakutia

The subject of the study is the soil-geochemical features of cryogenic mid-taiga landscapes of the Vilyuy River valley in its middle course, located near Mahatta and the village of Kysyl-Syr of the Republic of Sakha (Yakutia). Morphological descriptions of soil profiles were compiled. Chemical and analytical laboratory work was carried out in order to establish the values of the physico-chemical parameters of soil horizons - pH, the content of easily soluble salts, the content of organic carbon, granulometric composition, fractional composition of iron. The main aspect of the soil-geochemical properties of the landscapes of the middle Vilyui River is the gross chemical composition of cryogenic soils. The gross contents of chemical elements were determined by X–ray fluorescence using portable X-ray diffraction, after which the geochemical coefficients of radial (profile) and lateral (catenary) differentiation of concentrations of chemical elements R and were calculated. In automorphic soils, most of the chemical elements are removed from their surface organic horizons, and in mineral ones they are concentrated. Ca, Ti, Mn, Fe, Zn and Zr differ by the highest values of the coefficients R (R reaches 20). The radial differentiation is significantly influenced by acidity, organic carbon content and other soil properties, for example, the increased content of Si, Ca, V and Zn (R up to 1,3–3,7) relative to the horizon of soil parent rocks which is associated with the content of Sorghum. In terms of lateral differentiation, most of the studied elements are characterized by accumulation in the upper part of the soil-geochemical catena. The catenae Ca, Mn, Fe, Zn and Y are most widely distributed in soils (LCa = 0.3–1.8; LMn = 0.1–2.0; LFe = 0.6–2.1; LZn = 0.9–2.9 and LY = 0.3–1.4).

Soil Geochemical Properties Influencing the Diversity of Bacteria and Archaea in Soils of the Kitezh Lake Area, Antarctica.

It is believed that polar regions are influenced by global warming more significantly, and because polar regions are less affected by human activities, they have certain reference values for future predictions. This study aimed to investigate the effects of climate warming on soil microbial communities in lake areas, taking Kitezh Lake, Antarctica as the research area. Below-peak soil, intertidal soil, and sediment were taken at the sampling sites, and we hypothesized that the diversity and composition of the bacterial and archaeal communities were different among the three sampling sites. Through 16S rDNA sequencing and analysis, bacteria and archaea with high abundance were obtained. Based on canonical correspondence analysis and redundancy analysis, pH and phosphate had a great influence on the bacterial community whereas pH and nitrite had a great influence on the archaeal community. Weighted gene coexpression network analysis was used to find the hub bacteria and archaea related to geochemical factors. The results showed that in addition to pH, phosphate, and nitrite, moisture content, ammonium, nitrate, and total carbon content also play important roles in microbial diversity and structure at different sites by changing the abundance of some key microbiota.

Effects of natural non-volcanic CO2 leakage on soil microbial community composition and diversity

Geological carbon capture and storage (CCS) can reduce anthropogenic CO2 emissions, but questions exist about impacts at the surface if CO2 leaks from deep storage reservoirs. To examine potential impacts on soils, previous studies have investigated the geochemistry and microbiology of volcanic soils hosting high fluxes of CO2 rich gas. This study builds on those previous investigations by considering impacts of CO2 leakage at a non-volcanic site, where deep geogenic CO2 leaks from a cracked well casing. At the site, we collected 26 soil cores adjacent to soil gas monitoring wells. Based on measured CO2 fluxes, the soil samples fall into two groups 1) high CO2 (flux = 304.6 ± 272.1 g m−2 d−1, conc. = 29.1 ± 34 %) and 2) low CO2 (flux = 15.8 ± 6.1 g m−2 d−1, conc. = 0.8 ± 0.9 %). Soil pH was significantly lower (p < 0.05) in high flux group samples (4.6 ± 0.3) than the low flux ones (5.3 ± 0.7). Beta diversity calculations using 16S rRNA gene sequences and redundancy analysis (RDA) revealed clear clustering of microbial communities relative to CO2 flux and significant correlations of community composition with pH and organic carbon content. In the high flux soils, abundant microbial groups included Acidobacteriota, Ktedonobacteria, and SC-I-84 in the phylum Proteobacteria, as well as Nitrososphaeria, a genus of ammonia oxidizing archaea. Compared to volcanic sites described previously, our non-volcanic site had slight differences in soil geochemical properties and gradual shifts in community compositions between CO2 hotspots and background locations. Moreover, the elevated abundance of SC-I-84 has not been reported in studies of volcanic sites. This study improves our ability to predict potential environmental impacts of geological CCS by expanding the range of conditions over which existing CO2 leakage has been observed.

Application of bovine bone meal and oyster shell meal to heavy metals polluted soil: Vegetable safety and bacterial community

The development of efficient, environmentally friendly soil amendments is necessary in order to minimize the risk of metal contaminants (Cd, Pb, Cu, and Zn) to the soil ecosystem. As soil amendments, bovine bone meal (BM) and oyster shell meal (OS) reduced the mobility and bioavailability of metals primarily by increasing soil pH. Soil geochemical properties (pH, EC, CEC, Ca, P, and K) after amendment supplementation were more likely to affect metal migration than enzyme activity. Furthermore, BM and OS were found to suppress the Cd and Pb uptake by water spinach, keeping them below international standards for safe utilization. The protein and sugar content and peroxidase (POD) activity showed a significant negative correlation with the amount of metal in water spinach, whereas superoxide dismutase (SOD), ascorbate peroxidase (APX) activities and malondialdehyde (MDA) content exhibited a positive correlation with metal content in water spinach. We also found that BM and OS had less perturbation to phylum-level and genus-level bacterial composition during the remediation of heavy metals contaminated soil. Based on the above, we assume that BM and OS are eco-friendly soil amendments, which could improve soil nutrients contents, stabilize heavy metals and regulate bacterial community structure. Our research contributes to resource utilization of waste and holds promise for widespread application in current agricultural systems.

Disentangling the pedogenic factors controlling active Al and Fe concentrations in soils of the Cameroon volcanic line

Active Al, Fe and Si (i.e., oxalate extractable fraction: Alo, Feo, Sio) strongly affect soil physical, chemical and biological properties. This study examined the pedogenic factors affecting Alo, Feo and Sio contents across a soil weathering sequence in the Cameroon volcanic line. We investigated the B horizon (∼50-cm depth) from 26 soils formed in basaltic materials at different elevations (110–2570 m) incorporating a wide range of temperature (14–27 °C) and precipitation (1520–3130 mm). The weathering sequence ranged from weakly weathered Andisols in the southwest region grading to strongly weathered Oxisols on the central highlands. We assumed pyrophosphate extractable Al/Fe (Alp/Fep) as organo-Al/Fe complexes, and Sio, (Alo − Alp) and (Feo − Fep) as short-range-order (SRO) minerals. Factor analysis of climatic (e.g., temperature and precipitation/leaching metrics) and soil geochemical properties (e.g., weathering indices) identified three independent factors representing temperature/dry season intensity, weathering degree and precipitation/leaching as the primary determinants of Alo, Feo and Sio concentrations. Organo-metal complexes (Alp and Fep) were negatively correlated with the temperature/dry season intensity factor, whereas the SRO mineral phases (Sio, Alo − Alp and Feo − Fep) were negatively correlated with weathering degree. The precipitation/leaching factor positively correlated with Alo, Feo and Sio. Our analysis infers that low temperature promotes the formation and preservation of organo-Al/Fe complexes, whereas weathering degree is more critical for SRO minerals. Further, increased weathering and a drier climate enhance the formation of crystalline clay minerals at the expense of SRO minerals. Allophanic materials (Sio) were evident (Sio: 9–43 g kg−1) only in weakly weathered soils. However, low allophanic contents were found in more highly weathered soils (Sio: 2–7 g kg−1) accompanied by high Alp and Fep, suggesting the importance of volcanic parent materials as a direct source of Al and Fe via weathering for the formation of organo-metal complexes. In sum, we clarified the discriminatory effects of climatic factors and degree of weathering in regulating the composition of the active Al, Fe and Si fractions along the Cameroon volcanic line.

Soil geochemistry - and not topography - as a major driver of carbon allocation, stocks, and dynamics in forests and soils of African tropical montane ecosystems.

The lack of field-based data in the tropics limits our mechanistic understanding of the drivers of net primary productivity (NPP) and allocation. Specifically, the role of local edaphic factors - such as soil parent material and topography controlling soil fertility as well as water and nutrient fluxes - remains unclear and introduces substantial uncertainty in understanding net ecosystem productivity and carbon (C) stocks. Using a combination of vegetation growth monitoring and soil geochemical properties, we found that soil fertility parameters reflecting the local parent material are the main drivers of NPP and C allocation patterns in tropical montane forests, resulting in significant differences in below- to aboveground biomass components across geochemical (soil) regions. Topography did not constrain the variability in C allocation and NPP. Soil organic C stocks showed no relation to C input in tropical forests. Instead, plant C input seemingly exceeded the maximum potential of these soils to stabilize C. We conclude that, even after many millennia of weathering and the presence of deeply developed soils, above- and belowground C allocation in tropical forests, as well as soil C stocks, vary substantially due to the geochemical properties that soils inherit from parent material.

Glacial Legacies: Microbial Communities of Antarctic Refugia.

Simple SummaryMicrobial communities in Antarctica have only recently been described with the increasing popularity and ease of genome sequencing. Using these methods, we aimed to test hypotheses of refugia using microbial communities in the McMurdo Dry Valleys of Victoria Land, Antarctica. Refugia are habitable areas that remain undisturbed during cycles of glacial expansions throughout Earth’s history. They may contain ancient lineages and unique communities worthy of conservation, as well as provide insight into the biotic history of Antarctica. We found unique microbial community assemblages from putative refugia in the McMurdo Dry Valleys indicating long-lived climax-communities in one of the harshest environments in the world. This finding corroborates the importance of glacial legacies in structuring not just the physical and geochemical environment, but also the soil microbial communities in this landscape.In the cold deserts of the McMurdo Dry Valleys (MDV) the suitability of soil for microbial life is determined by both contemporary processes and legacy effects. Climatic changes and accompanying glacial activity have caused local extinctions and lasting geochemical changes to parts of these soil ecosystems over several million years, while areas of refugia may have escaped these disturbances and existed under relatively stable conditions. This study describes the impact of historical glacial and lacustrine disturbance events on microbial communities across the MDV to investigate how this divergent disturbance history influenced the structuring of microbial communities across this otherwise very stable ecosystem. Soil bacterial communities from 17 sites representing either putative refugia or sites disturbed during the Last Glacial Maximum (LGM) (22-17 kya) were characterized using 16 S metabarcoding. Regardless of geographic distance, several putative refugia sites at elevations above 600 m displayed highly similar microbial communities. At a regional scale, community composition was found to be influenced by elevation and geographic proximity more so than soil geochemical properties. These results suggest that despite the extreme conditions, diverse microbial communities exist in these putative refugia that have presumably remained undisturbed at least through the LGM. We suggest that similarities in microbial communities can be interpreted as evidence for historical climate legacies on an ecosystem-wide scale.

Climatic controls on soil clay mineral distributions in humid volcanic regions of Sumatra and Java, Indonesia

Climate and parent material are considered the primary factors determining the distributions of soil clay (secondary) minerals, but their influence has not been rigorously elucidated for tropical volcanic soils. Herein, we investigated soil secondary mineral distributions in volcanic regions of Java and Sumatra islands representing large variations in climatic (mean annual temperature (MAT): 13 to 27°C; precipitation: 1910 to 3950 mm) and parent material conditions (rhyolitic-to-basaltic tephra). Soil secondary minerals were assessed by selective extractions, X-ray diffraction analysis, and differential thermal analysis. Moreover, the thermodynamic stabilities of minerals were evaluated based on the ion activities of equilibrated soil–water suspensions. Factor analysis of climate and soil geochemical (e.g., total Si, Fe and K) properties identified temperature, dry season intensity, and parent material as the primary factors regulating secondary mineral distributions. A negative correlation between oxalate extractable Al and Fe (Alo and Feo) and the temperature factor indicates low temperature promoted the formation and preservation of short-range-order (SRO) minerals and organo-Al/Fe complexes, which resulted in Alo + 1/2Feo ≥ 20 g kg−1 (andic property criterion) at MAT <21°C. Desiccation in the dry season, represented by excess precipitation for the driest quarter of the year, was related to soil H4SiO40 activity of soil–water suspensions. High H4SiO40 activity resulting from intense seasonal desiccation coincided with a higher Si/Al ratio of SRO aluminosilicates (Si-rich allophane) and smectite. In contrast, low H4SiO40 activity enhanced the formation of SRO aluminosilicates with a low Si/Al ratio (Al-rich allophane) and gibbsite. The influence of parent materials was evident in high free Fe(hydr) oxide content in soils derived from mafic materials and the occurrence of mica, which altered to hydroxy-Al interlayered vermiculite under continuous leaching conditions, in soils from felsic materials. Overall, we demonstrated strong temperature and seasonal desiccation controls on secondary mineral distributions in the humid, tropical volcanic soils of Java and Sumatra islands.

Impacts from Topsoil Stockpile Height on Soil Geochemical Properties in Two Mining Operations in British Columbia: Implications for Restoration Practices

Mining activities are often severely disruptive to the landscape, and a major barrier to reclamation after mining is lack of quality topsoil. This research addresses knowledge gaps in the industry by exploring the compositional nature of topsoil stockpiles and their ability to facilitate post-mining revegetation after long-term storage. To do this, we conducted an extensive profile characterization of two topsoil stockpiles at two mining operations in the interior of British Columbia, where soil geochemical properties were investigated. Both stockpiles showed reduced soil quality and significant changes compared to reference soils. Importantly, there was an accumulation of metals and a reduction in soil nutrients with increasing stockpile depth in one or both stockpiles. These results highlight the important influence of topsoil-stockpile height on soil geochemical properties, which ultimately influences the success of restoration. This research provides insights into the response of soil geochemistry across a depth gradient in severely disturbed mining soils.