Nitrogen (N) contamination from rice paddy cultivation has threatened the quality of water resources in the upper reaches of the Huangpu River. In this study, a 3-year experiment (2009–2011) was conducted at a typical rice field in the Huangpu River watershed. The rates of N loading via surface runoff and subsurface leaching from the field were measured with a permanently installed lysimeter system. In the experiment, four treatments were tested, including applications of only chemical fertilizer (CT), only organic manure (OT), a mixture of the two types of fertilizers (MT) and a control (CK). The field data indicated that the average rates of the seasonal N loading induced by both runoff and leaching for CK, CT, MT and OT were 3.38, 16.79, 15.07 and 7.14kgN/ha, respectively. However, OT decreased the rice yields to 5482kg/ha, whereas MT maintained the optimal yields of 6818kg/ha. A process-based model, denitrification–decomposition or DNDC, was adopted to assist with interpreting and integrating the experimental results. DNDC has been calibrated and validated against the field data and accurately simulated the N losses via surface runoff and subsurface leaching from the paddy field. The modeled seasonal N loading rates for CK, CT, MT and OT were 3.25, 18.84, 15.54 and 6.46kgN/ha, respectively, which were in accordance with field observations. The modeled rice yields (4126–7365kg/ha) across the treatments were also in agreement with the observations (3788–6818kg/ha), though approximately 8% higher than observations. The results of sensitivity analysis indicated that increases in precipitation or fertilization or decreases in soil clay fraction increased the N loading rate. In addition, the scenario simulation tests indicated that the application of urea at a rate of 170kgN/ha was the optimal fertilization method for the rice field, which maintained the optimal rice yields with a relatively low rate of N loading of 11.55kgN/ha. The revised DNDC model proved to be an effective tool for assessing best management practices that reduce N loading in rice paddy field in China.
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